RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 SPAG11AQ6PDA7 123 aa8.98□□□□□ -0.97
SEC13-201ENST00000337354 LINC00304Q8N9R0 145 aa8.98□□□□□ -0.97
SEC13-201ENST00000337354 CLEC2BQ92478 149 aa8.98□□□□□ -0.97
SEC13-201ENST00000337354 DNAL4O96015 105 aa8.97□□□□□ -0.97
SEC13-201ENST00000337354 C9orf153Q5TBE3 101 aa8.97□□□□□ -0.97
SEC13-201ENST00000337354 Q8NBF4 154 aa8.97□□□□□ -0.97
SEC13-201ENST00000337354 H3BQ85 93 aa8.96□□□□□ -0.98
SEC13-201ENST00000337354 C4orf48Q5BLP8 95 aa8.96□□□□□ -0.98
SEC13-201ENST00000337354 TRACP01848 142 aa8.95□□□□□ -0.98
SEC13-201ENST00000337354 SNHG12Q9BXW3 62 aa8.95□□□□□ -0.98
SEC13-201ENST00000337354 LST1O00453 97 aa8.94□□□□□ -0.98
SEC13-201ENST00000337354 LYRM7Q5U5X0 104 aa8.94□□□□□ -0.98
SEC13-201ENST00000337354 F8WEM9 126 aa8.93□□□□□ -0.98
SEC13-201ENST00000337354 C9orf118A6NHY6 69 aa8.92□□□□□ -0.98
SEC13-201ENST00000337354 PCP4L1A6NKN8 68 aa8.92□□□□□ -0.98
SEC13-201ENST00000337354 ORMDL1Q9P0S3 153 aa8.92□□□□□ -0.98
SEC13-201ENST00000337354 TAX1BP3O14907 124 aa8.91□□□□□ -0.98
SEC13-201ENST00000337354 SPINK1P00995 79 aa8.91□□□□□ -0.98
SEC13-201ENST00000337354 NAA38Q9BRA0 125 aaKnown RBP8.91□□□□□ -0.98
SEC13-201ENST00000337354 HMCN2Q8NDA2 5059 aa8.91□□□□□ -0.98
SEC13-201ENST00000337354 TRBV20-1A0A075B6N2 111 aa8.9□□□□□ -0.98
SEC13-201ENST00000337354 H3BUT2 72 aa8.9□□□□□ -0.98
SEC13-201ENST00000337354 TMEM256-PLSCR3K7ERE1 68 aa8.9□□□□□ -0.98
SEC13-201ENST00000337354 ATXN8Q156A1 80 aa8.9□□□□□ -0.98
SEC13-201ENST00000337354 COL5A1-AS1Q5SY13 56 aa8.9□□□□□ -0.98
SEC13-201ENST00000337354 FABP2P12104 132 aa8.89□□□□□ -0.99
SEC13-201ENST00000337354 IGLV8-61A0A075B6I0 122 aa8.88□□□□□ -0.99
SEC13-201ENST00000337354 NDUFV3P56181 108 aaKnown RBP8.88□□□□□ -0.99
SEC13-201ENST00000337354 RPS29P62273 56 aaKnown RBP8.88□□□□□ -0.99
SEC13-201ENST00000337354 TCL1BO95988 128 aa8.87□□□□□ -0.99
SEC13-201ENST00000337354 Q6JHZ5 121 aa8.87□□□□□ -0.99
SEC13-201ENST00000337354 CD164Q04900 197 aa8.86□□□□□ -0.99
SEC13-201ENST00000337354 A0A1W2PPM0 123 aa8.86□□□□□ -0.99
SEC13-201ENST00000337354 UBE2V1Q13404 147 aa8.85□□□□□ -0.99
SEC13-201ENST00000337354 H3BMG7 143 aa8.83□□□□□ -1
SEC13-201ENST00000337354 BAALC-AS2P0C853 105 aa8.83□□□□□ -1
SEC13-201ENST00000337354 IGFL1Q6UW32 110 aa8.8□□□□□ -1
SEC13-201ENST00000337354 LIMD2Q9BT23 127 aa8.8□□□□□ -1
SEC13-201ENST00000337354 HRCT1Q6UXD1 115 aa8.79□□□□□ -1
SEC13-201ENST00000337354 ANKRD29Q8N6D5 301 aa8.78□□□□□ -1
SEC13-201ENST00000337354 A0A0G2JQZ4 141 aa8.77□□□□□ -1.01
SEC13-201ENST00000337354 Q5XG85 94 aa8.77□□□□□ -1.01
SEC13-201ENST00000337354 SPCS1Q9Y6A9 102 aa8.76□□□□□ -1.01
SEC13-201ENST00000337354 C9JAW5 83 aa8.75□□□□□ -1.01
SEC13-201ENST00000337354 RBM3P98179 157 aaKnown RBP8.74□□□□□ -1.01
SEC13-201ENST00000337354 PRR4Q16378 134 aa8.74□□□□□ -1.01
SEC13-201ENST00000337354 Q6Q795 121 aa8.74□□□□□ -1.01
SEC13-201ENST00000337354 TEN1Q86WV5 123 aa8.74□□□□□ -1.01
SEC13-201ENST00000337354 JMJD7-PLA2G4BH0Y9G9 81 aa8.73□□□□□ -1.01
SEC13-201ENST00000337354 TRBV7-7A0A0K0K1E9 115 aa8.73□□□□□ -1.01
SEC13-201ENST00000337354 FP248Q71RG6 208 aaPredicted RBP8.73□□□□□ -1.01
SEC13-201ENST00000337354 H3BT86 120 aa8.72□□□□□ -1.01
SEC13-201ENST00000337354 DSCR8Q96T75 97 aa8.72□□□□□ -1.01
SEC13-201ENST00000337354 RETNLBQ9BQ08 111 aa8.72□□□□□ -1.01
SEC13-201ENST00000337354 TRBV7-4A0A0J9YYF1 115 aa8.69□□□□□ -1.02
SEC13-201ENST00000337354 K7EP34 96 aa8.69□□□□□ -1.02
SEC13-201ENST00000337354 IGLV7-46A0A075B6I9 117 aa8.68□□□□□ -1.02
SEC13-201ENST00000337354 A0A1B0GV72 72 aa8.68□□□□□ -1.02
SEC13-201ENST00000337354 ASB16-AS1Q495Z4 193 aa8.68□□□□□ -1.02
SEC13-201ENST00000337354 GTF2H5Q6ZYL4 71 aa8.68□□□□□ -1.02
SEC13-201ENST00000337354 A0A1W2PNM2 257 aa8.67□□□□□ -1.02
SEC13-201ENST00000337354 SS18L2Q9UHA2 77 aa8.67□□□□□ -1.02
SEC13-201ENST00000337354 PDE6GP18545 87 aa8.66□□□□□ -1.02
SEC13-201ENST00000337354 UBR4Q5T4S7 5183 aa8.66□□□□□ -1.02
SEC13-201ENST00000337354 LRP2P98164 4655 aa8.65□□□□□ -1.02
SEC13-201ENST00000337354 CCKP06307 115 aa8.65□□□□□ -1.02
SEC13-201ENST00000337354 OBSCN-AS1Q96MR7 158 aa8.65□□□□□ -1.02
SEC13-201ENST00000337354 A0A087WSZ3 146 aa8.63□□□□□ -1.03
SEC13-201ENST00000337354 LOC110117498A0A087WWA1 95 aa8.63□□□□□ -1.03
SEC13-201ENST00000337354 C21orf62-AS1Q17RA5 79 aa8.63□□□□□ -1.03
SEC13-201ENST00000337354 C1orf195Q5TG92 126 aa8.63□□□□□ -1.03
SEC13-201ENST00000337354 MTURNQ8N3F0 131 aa8.63□□□□□ -1.03
SEC13-201ENST00000337354 TPRXLQ17RH7 258 aa8.62□□□□□ -1.03
SEC13-201ENST00000337354 A0A1B0GW54 56 aa8.61□□□□□ -1.03
SEC13-201ENST00000337354 Q6ZQT0 140 aa8.6□□□□□ -1.03
SEC13-201ENST00000337354 VPS25Q9BRG1 176 aa8.6□□□□□ -1.03
SEC13-201ENST00000337354 PRO0461Q9UI25 63 aa8.6□□□□□ -1.03
SEC13-201ENST00000337354 F8W1H4 67 aa8.59□□□□□ -1.03
SEC13-201ENST00000337354 SMCPP49901 116 aaPredicted RBP8.59□□□□□ -1.03
SEC13-201ENST00000337354 C14orf132Q9NPU4 83 aa8.59□□□□□ -1.03
SEC13-201ENST00000337354 KRTAP13-3Q3SY46 172 aa8.56□□□□□ -1.04
SEC13-201ENST00000337354 LPAP08519 4548 aa8.54□□□□□ -1.04
SEC13-201ENST00000337354 CDIP1Q9H305 208 aa8.54□□□□□ -1.04
SEC13-201ENST00000337354 Q96NJ1 140 aa8.5□□□□□ -1.05
SEC13-201ENST00000337354 LINC00472Q9H8W2 130 aa8.49□□□□□ -1.05
SEC13-201ENST00000337354 IGKV4-1P06312 121 aa8.46□□□□□ -1.06
SEC13-201ENST00000337354 A0A1B0GV90 55 aa8.45□□□□□ -1.06
SEC13-201ENST00000337354 J3KT08 172 aa8.45□□□□□ -1.06
SEC13-201ENST00000337354 ETDBQ3ZM63 59 aa8.45□□□□□ -1.06
SEC13-201ENST00000337354 NREPQ16612 68 aa8.44□□□□□ -1.06
SEC13-201ENST00000337354 RNF213Q63HN8 5207 aa8.44□□□□□ -1.06
SEC13-201ENST00000337354 C9orf92A6NGG3 77 aa8.43□□□□□ -1.06
SEC13-201ENST00000337354 DEFB116Q30KQ4 102 aa8.42□□□□□ -1.06
SEC13-201ENST00000337354 XP32Q5T750 250 aa8.42□□□□□ -1.06
SEC13-201ENST00000337354 SIGMAR1Q99720 223 aa8.42□□□□□ -1.06
SEC13-201ENST00000337354 NDUFB1O75438 58 aa8.36□□□□□ -1.07
SEC13-201ENST00000337354 SEC61BP60468 96 aaKnown RBP8.35□□□□□ -1.07
SEC13-201ENST00000337354 LINC00313P59037 77 aa8.35□□□□□ -1.07
SEC13-201ENST00000337354 A0A1B0GVX0 72 aa8.34□□□□□ -1.07
SEC13-201ENST00000337354 UBL5Q9BZL1 73 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms