RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 CLEC2BQ92478 149 aa11.95□□□□□ -0.5
MRPL40-201ENST00000333130 SNHG12Q9BXW3 62 aa11.94□□□□□ -0.5
MRPL40-201ENST00000333130 SMIM29Q86T20 159 aa11.93□□□□□ -0.5
MRPL40-201ENST00000333130 PPDPFLQ8WWR9 84 aa11.92□□□□□ -0.5
MRPL40-201ENST00000333130 OCIAD2Q56VL3 154 aa11.9□□□□□ -0.5
MRPL40-201ENST00000333130 NAA38Q9BRA0 125 aaKnown RBP11.9□□□□□ -0.5
MRPL40-201ENST00000333130 TAX1BP3O14907 124 aa11.89□□□□□ -0.51
MRPL40-201ENST00000333130 SCGB1C2P0DMR2 95 aa11.89□□□□□ -0.51
MRPL40-201ENST00000333130 PCP4L1A6NKN8 68 aa11.88□□□□□ -0.51
MRPL40-201ENST00000333130 LST1O00453 97 aa11.88□□□□□ -0.51
MRPL40-201ENST00000333130 SPINK1P00995 79 aa11.88□□□□□ -0.51
MRPL40-201ENST00000333130 F8WEM9 126 aa11.87□□□□□ -0.51
MRPL40-201ENST00000333130 TRACP01848 142 aa11.86□□□□□ -0.51
MRPL40-201ENST00000333130 C9orf118A6NHY6 69 aa11.85□□□□□ -0.51
MRPL40-201ENST00000333130 DNAL4O96015 105 aa11.85□□□□□ -0.51
MRPL40-201ENST00000333130 GHRHP01286 108 aa11.85□□□□□ -0.51
MRPL40-201ENST00000333130 H3BUT2 72 aa11.84□□□□□ -0.51
MRPL40-201ENST00000333130 HMCN2Q8NDA2 5059 aa11.83□□□□□ -0.51
MRPL40-201ENST00000333130 PRR4Q16378 134 aa11.83□□□□□ -0.52
MRPL40-201ENST00000333130 COL5A1-AS1Q5SY13 56 aa11.82□□□□□ -0.52
MRPL40-201ENST00000333130 LYRM7Q5U5X0 104 aa11.82□□□□□ -0.52
MRPL40-201ENST00000333130 RPS29P62273 56 aaKnown RBP11.81□□□□□ -0.52
MRPL40-201ENST00000333130 TCL1BO95988 128 aa11.8□□□□□ -0.52
MRPL40-201ENST00000333130 ORMDL1Q9P0S3 153 aa11.8□□□□□ -0.52
MRPL40-201ENST00000333130 H3BQ85 93 aa11.79□□□□□ -0.52
MRPL40-201ENST00000333130 ATXN8Q156A1 80 aa11.79□□□□□ -0.52
MRPL40-201ENST00000333130 IGLV8-61A0A075B6I0 122 aa11.79□□□□□ -0.52
MRPL40-201ENST00000333130 A0A1W2PPM0 123 aa11.78□□□□□ -0.52
MRPL40-201ENST00000333130 TRBV20-1A0A075B6N2 111 aa11.77□□□□□ -0.53
MRPL40-201ENST00000333130 TMEM256-PLSCR3K7ERE1 68 aa11.75□□□□□ -0.53
MRPL40-201ENST00000333130 NDUFV3P56181 108 aaKnown RBP11.75□□□□□ -0.53
MRPL40-201ENST00000333130 CD164Q04900 197 aa11.75□□□□□ -0.53
MRPL40-201ENST00000333130 LIMD2Q9BT23 127 aa11.75□□□□□ -0.53
MRPL40-201ENST00000333130 FABP2P12104 132 aa11.74□□□□□ -0.53
MRPL40-201ENST00000333130 RETNLBQ9BQ08 111 aa11.74□□□□□ -0.53
MRPL40-201ENST00000333130 Q6JHZ5 121 aa11.73□□□□□ -0.53
MRPL40-201ENST00000333130 HRCT1Q6UXD1 115 aa11.72□□□□□ -0.53
MRPL40-201ENST00000333130 UBE2V1Q13404 147 aa11.7□□□□□ -0.54
MRPL40-201ENST00000333130 IGFL1Q6UW32 110 aa11.69□□□□□ -0.54
MRPL40-201ENST00000333130 FP248Q71RG6 208 aaPredicted RBP11.69□□□□□ -0.54
MRPL40-201ENST00000333130 A0A0G2JQZ4 141 aa11.68□□□□□ -0.54
MRPL40-201ENST00000333130 H3BMG7 143 aa11.67□□□□□ -0.54
MRPL40-201ENST00000333130 BAALC-AS2P0C853 105 aa11.67□□□□□ -0.54
MRPL40-201ENST00000333130 IGLV7-46A0A075B6I9 117 aa11.66□□□□□ -0.54
MRPL40-201ENST00000333130 SPCS1Q9Y6A9 102 aa11.64□□□□□ -0.55
MRPL40-201ENST00000333130 C9JAW5 83 aa11.63□□□□□ -0.55
MRPL40-201ENST00000333130 ANKRD29Q8N6D5 301 aa11.63□□□□□ -0.55
MRPL40-201ENST00000333130 LRP2P98164 4655 aa11.6□□□□□ -0.55
MRPL40-201ENST00000333130 Q5XG85 94 aa11.6□□□□□ -0.55
MRPL40-201ENST00000333130 Q6Q795 121 aa11.59□□□□□ -0.55
MRPL40-201ENST00000333130 TPRXLQ17RH7 258 aa11.58□□□□□ -0.56
MRPL40-201ENST00000333130 H3BT86 120 aa11.57□□□□□ -0.56
MRPL40-201ENST00000333130 K7EP34 96 aa11.57□□□□□ -0.56
MRPL40-201ENST00000333130 TRBV7-7A0A0K0K1E9 115 aa11.56□□□□□ -0.56
MRPL40-201ENST00000333130 A0A1B0GV72 72 aa11.56□□□□□ -0.56
MRPL40-201ENST00000333130 TRBV7-4A0A0J9YYF1 115 aa11.55□□□□□ -0.56
MRPL40-201ENST00000333130 RBM3P98179 157 aaKnown RBP11.54□□□□□ -0.56
MRPL40-201ENST00000333130 TEN1Q86WV5 123 aa11.54□□□□□ -0.56
MRPL40-201ENST00000333130 LPAP08519 4548 aa11.54□□□□□ -0.56
MRPL40-201ENST00000333130 CDIP1Q9H305 208 aa11.54□□□□□ -0.56
MRPL40-201ENST00000333130 A0A1W2PNM2 257 aa11.53□□□□□ -0.56
MRPL40-201ENST00000333130 MTURNQ8N3F0 131 aa11.53□□□□□ -0.56
MRPL40-201ENST00000333130 JMJD7-PLA2G4BH0Y9G9 81 aa11.52□□□□□ -0.57
MRPL40-201ENST00000333130 OBSCN-AS1Q96MR7 158 aa11.52□□□□□ -0.57
MRPL40-201ENST00000333130 SS18L2Q9UHA2 77 aa11.51□□□□□ -0.57
MRPL40-201ENST00000333130 DSCR8Q96T75 97 aa11.5□□□□□ -0.57
MRPL40-201ENST00000333130 ASB16-AS1Q495Z4 193 aa11.49□□□□□ -0.57
MRPL40-201ENST00000333130 PRO0461Q9UI25 63 aa11.49□□□□□ -0.57
MRPL40-201ENST00000333130 GTF2H5Q6ZYL4 71 aa11.48□□□□□ -0.57
MRPL40-201ENST00000333130 CCKP06307 115 aa11.46□□□□□ -0.57
MRPL40-201ENST00000333130 SMCPP49901 116 aaPredicted RBP11.46□□□□□ -0.57
MRPL40-201ENST00000333130 LOC110117498A0A087WWA1 95 aa11.45□□□□□ -0.58
MRPL40-201ENST00000333130 KRTAP13-3Q3SY46 172 aa11.45□□□□□ -0.58
MRPL40-201ENST00000333130 C1orf195Q5TG92 126 aa11.45□□□□□ -0.58
MRPL40-201ENST00000333130 A0A087WSZ3 146 aa11.43□□□□□ -0.58
MRPL40-201ENST00000333130 Q6ZQT0 140 aa11.43□□□□□ -0.58
MRPL40-201ENST00000333130 UBR4Q5T4S7 5183 aa11.43□□□□□ -0.58
MRPL40-201ENST00000333130 PDE6GP18545 87 aa11.41□□□□□ -0.58
MRPL40-201ENST00000333130 C14orf132Q9NPU4 83 aa11.41□□□□□ -0.58
MRPL40-201ENST00000333130 VPS25Q9BRG1 176 aa11.38□□□□□ -0.59
MRPL40-201ENST00000333130 F8W1H4 67 aa11.36□□□□□ -0.59
MRPL40-201ENST00000333130 C21orf62-AS1Q17RA5 79 aa11.36□□□□□ -0.59
MRPL40-201ENST00000333130 A0A1B0GW54 56 aa11.34□□□□□ -0.59
MRPL40-201ENST00000333130 Q96NJ1 140 aa11.33□□□□□ -0.6
MRPL40-201ENST00000333130 C9orf92A6NGG3 77 aa11.31□□□□□ -0.6
MRPL40-201ENST00000333130 A0A1B0GV90 55 aa11.29□□□□□ -0.6
MRPL40-201ENST00000333130 XP32Q5T750 250 aa11.27□□□□□ -0.61
MRPL40-201ENST00000333130 LINC00472Q9H8W2 130 aa11.27□□□□□ -0.61
MRPL40-201ENST00000333130 SEC61BP60468 96 aaKnown RBP11.25□□□□□ -0.61
MRPL40-201ENST00000333130 ETDBQ3ZM63 59 aa11.24□□□□□ -0.61
MRPL40-201ENST00000333130 SIGMAR1Q99720 223 aa11.24□□□□□ -0.61
MRPL40-201ENST00000333130 IGKV4-1P06312 121 aa11.19□□□□□ -0.62
MRPL40-201ENST00000333130 MUC17Q685J3 4493 aa11.16□□□□□ -0.62
MRPL40-201ENST00000333130 DEFB116Q30KQ4 102 aa11.16□□□□□ -0.62
MRPL40-201ENST00000333130 RNF213Q63HN8 5207 aa11.15□□□□□ -0.62
MRPL40-201ENST00000333130 J3KT08 172 aa11.14□□□□□ -0.63
MRPL40-201ENST00000333130 NREPQ16612 68 aa11.12□□□□□ -0.63
MRPL40-201ENST00000333130 A0A0U1RQV1 116 aa11.1□□□□□ -0.63
MRPL40-201ENST00000333130 RPL37P61927 97 aaKnown RBP11.09□□□□□ -0.63
MRPL40-201ENST00000333130 Q6ZVQ6 151 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms