RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 Q5VSD8 79 aa6.88□□□□□ -1.31
COL4A5-201ENST00000328300 RPS29P62273 56 aaKnown RBP6.87□□□□□ -1.31
COL4A5-201ENST00000328300 Q8N9P0 234 aaPredicted RBP6.87□□□□□ -1.31
COL4A5-201ENST00000328300 LINC01558Q9Y6Z2 57 aa6.86□□□□□ -1.31
COL4A5-201ENST00000328300 SEC61BP60468 96 aaKnown RBP6.86□□□□□ -1.31
COL4A5-201ENST00000328300 LINC01554Q52M75 96 aa6.86□□□□□ -1.31
COL4A5-201ENST00000328300 BPTFQ12830 3046 aa6.85□□□□□ -1.31
COL4A5-201ENST00000328300 IGSF10Q6WRI0 2623 aa6.85□□□□□ -1.31
COL4A5-201ENST00000328300 HRES1P13985 223 aa6.85□□□□□ -1.31
COL4A5-201ENST00000328300 KRTAP10-2P60368 255 aa6.85□□□□□ -1.31
COL4A5-201ENST00000328300 LUZP6Q538Z0 58 aa6.83□□□□□ -1.32
COL4A5-201ENST00000328300 Q6ZRN7 208 aaPredicted RBP6.83□□□□□ -1.32
COL4A5-201ENST00000328300 ASB16-AS1Q495Z4 193 aa6.82□□□□□ -1.32
COL4A5-201ENST00000328300 OXTP01178 125 aa6.82□□□□□ -1.32
COL4A5-201ENST00000328300 A0A1B0GU33 70 aa6.82□□□□□ -1.32
COL4A5-201ENST00000328300 Q5VV11 94 aa6.8□□□□□ -1.32
COL4A5-201ENST00000328300 PRAC1Q96KF2 57 aa6.8□□□□□ -1.32
COL4A5-201ENST00000328300 Q5W150 140 aa6.8□□□□□ -1.32
COL4A5-201ENST00000328300 CEP350Q5VT06 3117 aa6.79□□□□□ -1.32
COL4A5-201ENST00000328300 AKAP13Q12802 2813 aa6.78□□□□□ -1.32
COL4A5-201ENST00000328300 CSAG1Q6PB30 78 aa6.78□□□□□ -1.32
COL4A5-201ENST00000328300 S4R3F8 94 aa6.74□□□□□ -1.33
COL4A5-201ENST00000328300 SPINK7P58062 85 aa6.73□□□□□ -1.33
COL4A5-201ENST00000328300 PANO1I0J062 215 aa6.73□□□□□ -1.33
COL4A5-201ENST00000328300 DMAC1Q96GE9 116 aa6.7□□□□□ -1.34
COL4A5-201ENST00000328300 C5orf42Q9H799 3197 aa6.7□□□□□ -1.34
COL4A5-201ENST00000328300 KMT2BQ9UMN6 2715 aaPredicted RBP6.69□□□□□ -1.34
COL4A5-201ENST00000328300 KRTAP29-1A8MX34 341 aaPredicted RBP6.69□□□□□ -1.34
COL4A5-201ENST00000328300 UTRNP46939 3433 aa6.68□□□□□ -1.34
COL4A5-201ENST00000328300 KRTAP13-1Q8IUC0 172 aa6.68□□□□□ -1.34
COL4A5-201ENST00000328300 CENPEQ02224 2701 aa6.67□□□□□ -1.34
COL4A5-201ENST00000328300 BAHCC1Q9P281 2608 aa6.66□□□□□ -1.34
COL4A5-201ENST00000328300 TEP1Q99973 2627 aaKnown RBP6.65□□□□□ -1.35
COL4A5-201ENST00000328300 CAMK2N1Q7Z7J9 78 aa6.64□□□□□ -1.35
COL4A5-201ENST00000328300 COL6A5A8TX70 2615 aa6.64□□□□□ -1.35
COL4A5-201ENST00000328300 MGAQ8IWI9 3026 aa6.64□□□□□ -1.35
COL4A5-201ENST00000328300 RANBP2P49792 3224 aaKnown RBP6.63□□□□□ -1.35
COL4A5-201ENST00000328300 A0A087X002 238 aa6.62□□□□□ -1.35
COL4A5-201ENST00000328300 M0R2T5 61 aa6.62□□□□□ -1.35
COL4A5-201ENST00000328300 STAB1Q9NY15 2570 aa6.61□□□□□ -1.35
COL4A5-201ENST00000328300 KRTAP7-1Q8IUC3 87 aa6.61□□□□□ -1.35
COL4A5-201ENST00000328300 A0A0A0MQY5 61 aa6.6□□□□□ -1.35
COL4A5-201ENST00000328300 SETXQ7Z333 2677 aaKnown RBP6.59□□□□□ -1.35
COL4A5-201ENST00000328300 TEX15Q9BXT5 2789 aa6.57□□□□□ -1.36
COL4A5-201ENST00000328300 KRTAP11-1Q8IUC1 163 aa6.56□□□□□ -1.36
COL4A5-201ENST00000328300 DSPP15924 2871 aaKnown RBP6.54□□□□□ -1.36
COL4A5-201ENST00000328300 ROMO1P60602 79 aa6.54□□□□□ -1.36
COL4A5-201ENST00000328300 RPL37P61927 97 aaKnown RBP6.53□□□□□ -1.36
COL4A5-201ENST00000328300 NSD1Q96L73 2696 aaPredicted RBP6.52□□□□□ -1.37
COL4A5-201ENST00000328300 KRTAP13-2Q52LG2 175 aa6.52□□□□□ -1.37
COL4A5-201ENST00000328300 R4GN34 69 aa6.52□□□□□ -1.37
COL4A5-201ENST00000328300 CHD6Q8TD26 2715 aa6.52□□□□□ -1.37
COL4A5-201ENST00000328300 ITPR2Q14571 2701 aa6.51□□□□□ -1.37
COL4A5-201ENST00000328300 GCN1Q92616 2671 aaKnown RBP6.5□□□□□ -1.37
COL4A5-201ENST00000328300 H1FX-AS1Q4G0G2 97 aa6.49□□□□□ -1.37
COL4A5-201ENST00000328300 NOTCH1P46531 2555 aa6.46□□□□□ -1.37
COL4A5-201ENST00000328300 NOTCH2NLQ7Z3S9 236 aa6.45□□□□□ -1.38
COL4A5-201ENST00000328300 SPATA8Q6RVD6 105 aa6.43□□□□□ -1.38
COL4A5-201ENST00000328300 UBR5O95071 2799 aaPredicted RBP6.42□□□□□ -1.38
COL4A5-201ENST00000328300 A6NN06 94 aa6.41□□□□□ -1.38
COL4A5-201ENST00000328300 FLNCQ14315 2725 aa6.4□□□□□ -1.38
COL4A5-201ENST00000328300 LAMA3Q16787 3333 aa6.4□□□□□ -1.38
COL4A5-201ENST00000328300 KRTAP16-1A8MUX0 517 aa6.39□□□□□ -1.39
COL4A5-201ENST00000328300 NBEAL1Q6ZS30 2694 aa6.39□□□□□ -1.39
COL4A5-201ENST00000328300 A8MUU9 505 aa6.39□□□□□ -1.39
COL4A5-201ENST00000328300 HIVEP1P15822 2718 aa6.39□□□□□ -1.39
COL4A5-201ENST00000328300 M0QZ58 72 aa6.38□□□□□ -1.39
COL4A5-201ENST00000328300 C20orf166-AS1Q96NR2 134 aa6.38□□□□□ -1.39
COL4A5-201ENST00000328300 ITPR1Q14643 2758 aa6.37□□□□□ -1.39
COL4A5-201ENST00000328300 MAP1AP78559 2803 aaPredicted RBP6.36□□□□□ -1.39
COL4A5-201ENST00000328300 ADM2Q7Z4H4 148 aa6.35□□□□□ -1.39
COL4A5-201ENST00000328300 MKI67P46013 3256 aaKnown RBP6.34□□□□□ -1.39
COL4A5-201ENST00000328300 TNRC18O15417 2968 aaPredicted RBP6.34□□□□□ -1.39
COL4A5-201ENST00000328300 PLAC4Q8WY50 150 aa6.34□□□□□ -1.4
COL4A5-201ENST00000328300 KRTAP25-1Q3LHN0 102 aa6.33□□□□□ -1.4
COL4A5-201ENST00000328300 APCP25054 2843 aa6.32□□□□□ -1.4
COL4A5-201ENST00000328300 KRTAP1-4P0C5Y4 121 aa6.32□□□□□ -1.4
COL4A5-201ENST00000328300 WDFY4Q6ZS81 3184 aa6.31□□□□□ -1.4
COL4A5-201ENST00000328300 UTP20O75691 2785 aaKnown RBP6.3□□□□□ -1.4
COL4A5-201ENST00000328300 PCNTO95613 3336 aa6.27□□□□□ -1.41
COL4A5-201ENST00000328300 NBEAL2Q6ZNJ1 2754 aa6.27□□□□□ -1.41
COL4A5-201ENST00000328300 FLG2Q5D862 2391 aaPredicted RBP6.26□□□□□ -1.41
COL4A5-201ENST00000328300 PRUNE2Q8WUY3 3088 aa6.25□□□□□ -1.41
COL4A5-201ENST00000328300 A8MU10 97 aa6.23□□□□□ -1.41
COL4A5-201ENST00000328300 TPRXLQ17RH7 258 aa6.22□□□□□ -1.41
COL4A5-201ENST00000328300 NIPBLQ6KC79 2804 aaeCLIP6.22□□□□□ -1.41
COL4A5-201ENST00000328300 CFAP54Q96N23 3096 aa6.21□□□□□ -1.42
COL4A5-201ENST00000328300 DMBT1Q9UGM3 2413 aaPredicted RBP6.2□□□□□ -1.42
COL4A5-201ENST00000328300 A0A0C4DFX4 3053 aa6.18□□□□□ -1.42
COL4A5-201ENST00000328300 XP32Q5T750 250 aa6.18□□□□□ -1.42
COL4A5-201ENST00000328300 NDUFAF8A1L188 74 aa6.17□□□□□ -1.42
COL4A5-201ENST00000328300 A0A1B0GVY2 172 aa6.17□□□□□ -1.42
COL4A5-201ENST00000328300 STAB2Q8WWQ8 2551 aa6.16□□□□□ -1.42
COL4A5-201ENST00000328300 EYSQ5T1H1 3165 aa6.16□□□□□ -1.42
COL4A5-201ENST00000328300 FRYQ5TBA9 3013 aa6.15□□□□□ -1.42
COL4A5-201ENST00000328300 BRCA2P51587 3418 aa6.15□□□□□ -1.42
COL4A5-201ENST00000328300 ATMQ13315 3056 aa6.15□□□□□ -1.42
COL4A5-201ENST00000328300 TRIOO75962 3097 aa6.15□□□□□ -1.43
COL4A5-201ENST00000328300 TENM4Q6N022 2769 aa6.12□□□□□ -1.43
COL4A5-201ENST00000328300 VPS13AQ96RL7 3174 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms