RNA–Protein interactions for RNA: ENST00000325083.12

PCM1-201, Transcript of pericentriolar material 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCM1, Length 6,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-201ENST00000325083 CHD8Q9HCK8 2581 aa8.28□□□□□ -1.08
PCM1-201ENST00000325083 ANKRD11Q6UB99 2663 aaPredicted RBP8.24□□□□□ -1.09
PCM1-201ENST00000325083 A8MU10 97 aa8.24□□□□□ -1.09
PCM1-201ENST00000325083 LCE6AA0A183 80 aa8.22□□□□□ -1.09
PCM1-201ENST00000325083 PANO1I0J062 215 aa8.22□□□□□ -1.09
PCM1-201ENST00000325083 A8MUU9 505 aa8.2□□□□□ -1.1
PCM1-201ENST00000325083 A0A087X002 238 aa8.19□□□□□ -1.1
PCM1-201ENST00000325083 DNAH12Q6ZR08 3092 aa8.19□□□□□ -1.1
PCM1-201ENST00000325083 KRTAP25-1Q3LHN0 102 aa8.17□□□□□ -1.1
PCM1-201ENST00000325083 POLQO75417 2590 aa8.17□□□□□ -1.1
PCM1-201ENST00000325083 NOTCH2NLQ7Z3S9 236 aa8.16□□□□□ -1.1
PCM1-201ENST00000325083 PIEZO1Q92508 2521 aa8.15□□□□□ -1.11
PCM1-201ENST00000325083 MTORP42345 2549 aa8.14□□□□□ -1.11
PCM1-201ENST00000325083 C5orf42Q9H799 3197 aa8.12□□□□□ -1.11
PCM1-201ENST00000325083 ASB16-AS1Q495Z4 193 aa8.11□□□□□ -1.11
PCM1-201ENST00000325083 C10orf95Q9H7T3 257 aa8.11□□□□□ -1.11
PCM1-201ENST00000325083 NDUFAF8A1L188 74 aa8.1□□□□□ -1.11
PCM1-201ENST00000325083 USP9YO00507 2555 aaPredicted RBP8.1□□□□□ -1.11
PCM1-201ENST00000325083 SPTBN4Q9H254 2564 aa8.1□□□□□ -1.11
PCM1-201ENST00000325083 UTRNP46939 3433 aa8.08□□□□□ -1.12
PCM1-201ENST00000325083 KRTAP29-1A8MX34 341 aaPredicted RBP8.06□□□□□ -1.12
PCM1-201ENST00000325083 FASNP49327 2511 aaKnown RBP8.06□□□□□ -1.12
PCM1-201ENST00000325083 KRTAP4-16G5E9R7 235 aaPredicted RBP8.02□□□□□ -1.13
PCM1-201ENST00000325083 FLG2Q5D862 2391 aaPredicted RBP8□□□□□ -1.13
PCM1-201ENST00000325083 A6NN06 94 aa8□□□□□ -1.13
PCM1-201ENST00000325083 TNP1P09430 55 aa7.98□□□□□ -1.13
PCM1-201ENST00000325083 KRTAP11-1Q8IUC1 163 aa7.98□□□□□ -1.13
PCM1-201ENST00000325083 USP24Q9UPU5 2620 aa7.97□□□□□ -1.13
PCM1-201ENST00000325083 CEP295Q9C0D2 2601 aa7.86□□□□□ -1.15
PCM1-201ENST00000325083 CEP350Q5VT06 3117 aa7.85□□□□□ -1.15
PCM1-201ENST00000325083 PRRC2CQ9Y520 2896 aaKnown RBP7.85□□□□□ -1.15
PCM1-201ENST00000325083 RPS29P62273 56 aaKnown RBP7.85□□□□□ -1.15
PCM1-201ENST00000325083 A0A1B0GVY2 172 aa7.83□□□□□ -1.16
PCM1-201ENST00000325083 KRTAP13-2Q52LG2 175 aa7.82□□□□□ -1.16
PCM1-201ENST00000325083 KRTAP10-8P60410 259 aa7.81□□□□□ -1.16
PCM1-201ENST00000325083 KRTAP7-1Q8IUC3 87 aa7.74□□□□□ -1.17
PCM1-201ENST00000325083 MGAM2Q2M2H8 2515 aa7.73□□□□□ -1.17
PCM1-201ENST00000325083 Q6ZRN7 208 aaPredicted RBP7.72□□□□□ -1.17
PCM1-201ENST00000325083 FLNAP21333 2647 aaKnown RBP7.7□□□□□ -1.18
PCM1-201ENST00000325083 CFAP54Q96N23 3096 aa7.7□□□□□ -1.18
PCM1-201ENST00000325083 ITPR3Q14573 2671 aa7.69□□□□□ -1.18
PCM1-201ENST00000325083 PCNTO95613 3336 aa7.69□□□□□ -1.18
PCM1-201ENST00000325083 DMBT1Q9UGM3 2413 aaPredicted RBP7.68□□□□□ -1.18
PCM1-201ENST00000325083 HECTD1Q9ULT8 2610 aa7.62□□□□□ -1.19
PCM1-201ENST00000325083 MKI67P46013 3256 aaKnown RBP7.62□□□□□ -1.19
PCM1-201ENST00000325083 KRTAP13-1Q8IUC0 172 aa7.62□□□□□ -1.19
PCM1-201ENST00000325083 XIRP2A4UGR9 3374 aa7.59□□□□□ -1.19
PCM1-201ENST00000325083 A0A0C4DFX4 3053 aa7.59□□□□□ -1.19
PCM1-201ENST00000325083 CFAP46Q8IYW2 2715 aa7.58□□□□□ -1.2
PCM1-201ENST00000325083 PP632Q6XCG6 107 aa7.57□□□□□ -1.2
PCM1-201ENST00000325083 ATRQ13535 2644 aa7.53□□□□□ -1.2
PCM1-201ENST00000325083 EPG5Q9HCE0 2579 aa7.53□□□□□ -1.2
PCM1-201ENST00000325083 UNC80Q8N2C7 3258 aa7.52□□□□□ -1.21
PCM1-201ENST00000325083 KRTAP10-10P60014 251 aa7.52□□□□□ -1.21
PCM1-201ENST00000325083 CELSR3Q9NYQ7 3312 aa7.52□□□□□ -1.21
PCM1-201ENST00000325083 P0C880 135 aa7.5□□□□□ -1.21
PCM1-201ENST00000325083 TRIOO75962 3097 aa7.49□□□□□ -1.21
PCM1-201ENST00000325083 XP32Q5T750 250 aa7.49□□□□□ -1.21
PCM1-201ENST00000325083 H0YAA0 97 aa7.48□□□□□ -1.21
PCM1-201ENST00000325083 NBEAL1Q6ZS30 2694 aa7.48□□□□□ -1.21
PCM1-201ENST00000325083 CENPEQ02224 2701 aa7.45□□□□□ -1.22
PCM1-201ENST00000325083 AKAP13Q12802 2813 aa7.44□□□□□ -1.22
PCM1-201ENST00000325083 CHD6Q8TD26 2715 aa7.44□□□□□ -1.22
PCM1-201ENST00000325083 REV3LO60673 3130 aa7.44□□□□□ -1.22
PCM1-201ENST00000325083 PRO2289Q9P1D8 64 aa7.43□□□□□ -1.22
PCM1-201ENST00000325083 CHD7Q9P2D1 2997 aa7.41□□□□□ -1.22
PCM1-201ENST00000325083 FREM2Q5SZK8 3169 aa7.4□□□□□ -1.22
PCM1-201ENST00000325083 MAST4O15021 2626 aa7.4□□□□□ -1.22
PCM1-201ENST00000325083 DNAH14Q0VDD8 3507 aa7.39□□□□□ -1.23
PCM1-201ENST00000325083 HELZ2Q9BYK8 2649 aaKnown RBP7.37□□□□□ -1.23
PCM1-201ENST00000325083 TEX15Q9BXT5 2789 aa7.36□□□□□ -1.23
PCM1-201ENST00000325083 RANBP2P49792 3224 aaKnown RBP7.35□□□□□ -1.23
PCM1-201ENST00000325083 LAMA2P24043 3122 aaKnown RBP7.34□□□□□ -1.23
PCM1-201ENST00000325083 MGAQ8IWI9 3026 aa7.31□□□□□ -1.24
PCM1-201ENST00000325083 COL6A3P12111 3177 aa7.27□□□□□ -1.25
PCM1-201ENST00000325083 KRTAP1-4P0C5Y4 121 aa7.27□□□□□ -1.25
PCM1-201ENST00000325083 FLNBO75369 2602 aaKnown RBP7.26□□□□□ -1.25
PCM1-201ENST00000325083 WDFY4Q6ZS81 3184 aa7.24□□□□□ -1.25
PCM1-201ENST00000325083 TPRXLQ17RH7 258 aa7.24□□□□□ -1.25
PCM1-201ENST00000325083 GCN1Q92616 2671 aaKnown RBP7.23□□□□□ -1.25
PCM1-201ENST00000325083 STAB1Q9NY15 2570 aa7.23□□□□□ -1.25
PCM1-201ENST00000325083 BRCA2P51587 3418 aa7.23□□□□□ -1.25
PCM1-201ENST00000325083 NBEAL2Q6ZNJ1 2754 aa7.19□□□□□ -1.26
PCM1-201ENST00000325083 COL6A5A8TX70 2615 aa7.18□□□□□ -1.26
PCM1-201ENST00000325083 SZT2Q5T011 3432 aa7.17□□□□□ -1.26
PCM1-201ENST00000325083 VPS13AQ96RL7 3174 aa7.17□□□□□ -1.26
PCM1-201ENST00000325083 CDH23Q9H251 3354 aa7.17□□□□□ -1.26
PCM1-201ENST00000325083 KMT2BQ9UMN6 2715 aaPredicted RBP7.16□□□□□ -1.26
PCM1-201ENST00000325083 UNC79Q9P2D8 2635 aa7.16□□□□□ -1.26
PCM1-201ENST00000325083 STAB2Q8WWQ8 2551 aa7.16□□□□□ -1.26
PCM1-201ENST00000325083 FRYQ5TBA9 3013 aa7.15□□□□□ -1.26
PCM1-201ENST00000325083 LAMA3Q16787 3333 aa7.15□□□□□ -1.27
PCM1-201ENST00000325083 PRUNE2Q8WUY3 3088 aa7.12□□□□□ -1.27
PCM1-201ENST00000325083 KRTAP12-2P59991 146 aa7.12□□□□□ -1.27
PCM1-201ENST00000325083 KALRNO60229 2985 aa7.11□□□□□ -1.27
PCM1-201ENST00000325083 KRTAP13-3Q3SY46 172 aa7.11□□□□□ -1.27
PCM1-201ENST00000325083 APCP25054 2843 aa7.11□□□□□ -1.27
PCM1-201ENST00000325083 CRYBG3Q68DQ2 2970 aa7.1□□□□□ -1.27
PCM1-201ENST00000325083 TEP1Q99973 2627 aaKnown RBP7.09□□□□□ -1.27
PCM1-201ENST00000325083 ITPR2Q14571 2701 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms