RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 FP248Q71RG6 208 aaPredicted RBP5.08□□□□□ -1.6
CIITA-201ENST00000324288 A0A1B0GU33 70 aa5.08□□□□□ -1.6
CIITA-201ENST00000324288 Q75L30 129 aa5.07□□□□□ -1.6
CIITA-201ENST00000324288 IGLV7-43P04211 117 aa5.07□□□□□ -1.6
CIITA-201ENST00000324288 M0R2T5 61 aa5.06□□□□□ -1.6
CIITA-201ENST00000324288 SPINK7P58062 85 aa5.06□□□□□ -1.6
CIITA-201ENST00000324288 FLNCQ14315 2725 aa5.06□□□□□ -1.6
CIITA-201ENST00000324288 C5orf42Q9H799 3197 aa5.06□□□□□ -1.6
CIITA-201ENST00000324288 HRES1P13985 223 aa5.05□□□□□ -1.6
CIITA-201ENST00000324288 KRTAP10-3P60369 221 aa5.05□□□□□ -1.6
CIITA-201ENST00000324288 SPRR4Q96PI1 79 aa5.04□□□□□ -1.6
CIITA-201ENST00000324288 PLA2G2DQ9UNK4 145 aa5.04□□□□□ -1.6
CIITA-201ENST00000324288 GIG44P09565 113 aaPredicted RBP5.04□□□□□ -1.6
CIITA-201ENST00000324288 CAMK2N1Q7Z7J9 78 aa5.04□□□□□ -1.6
CIITA-201ENST00000324288 CNBPP62633 177 aaKnown RBP5.02□□□□□ -1.61
CIITA-201ENST00000324288 ASH1LQ9NR48 2969 aaKnown RBP5.02□□□□□ -1.61
CIITA-201ENST00000324288 PRR34Q9NV39 138 aa5.02□□□□□ -1.61
CIITA-201ENST00000324288 Q8N9P0 234 aaPredicted RBP5.01□□□□□ -1.61
CIITA-201ENST00000324288 CHD7Q9P2D1 2997 aa5.01□□□□□ -1.61
CIITA-201ENST00000324288 LINC00483Q53H64 154 aa5.01□□□□□ -1.61
CIITA-201ENST00000324288 Q5VV11 94 aa5.01□□□□□ -1.61
CIITA-201ENST00000324288 Q6ZSA8 131 aa5□□□□□ -1.61
CIITA-201ENST00000324288 LAMA2P24043 3122 aaKnown RBP5□□□□□ -1.61
CIITA-201ENST00000324288 A0A0A0MQY5 61 aa5□□□□□ -1.61
CIITA-201ENST00000324288 OXTP01178 125 aa5□□□□□ -1.61
CIITA-201ENST00000324288 C19orf73Q9NVV2 129 aa4.99□□□□□ -1.61
CIITA-201ENST00000324288 MGAQ8IWI9 3026 aa4.99□□□□□ -1.61
CIITA-201ENST00000324288 KALRNO60229 2985 aa4.99□□□□□ -1.61
CIITA-201ENST00000324288 NF1P21359 2839 aa4.99□□□□□ -1.61
CIITA-201ENST00000324288 LINC00612Q8N6U2 182 aa4.98□□□□□ -1.61
CIITA-201ENST00000324288 LINC01558Q9Y6Z2 57 aa4.98□□□□□ -1.61
CIITA-201ENST00000324288 TRIOO75962 3097 aa4.97□□□□□ -1.61
CIITA-201ENST00000324288 A0A096LNT2 108 aa4.97□□□□□ -1.61
CIITA-201ENST00000324288 IGLV7-46A0A075B6I9 117 aa4.97□□□□□ -1.61
CIITA-201ENST00000324288 TENM1Q9UKZ4 2725 aa4.97□□□□□ -1.61
CIITA-201ENST00000324288 NIPBLQ6KC79 2804 aaeCLIP4.96□□□□□ -1.62
CIITA-201ENST00000324288 TLX1NBP0CAT3 122 aa4.96□□□□□ -1.62
CIITA-201ENST00000324288 PCNTO95613 3336 aa4.95□□□□□ -1.62
CIITA-201ENST00000324288 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.95□□□□□ -1.62
CIITA-201ENST00000324288 TNP2Q05952 138 aa4.94□□□□□ -1.62
CIITA-201ENST00000324288 DMAC1Q96GE9 116 aa4.94□□□□□ -1.62
CIITA-201ENST00000324288 CRYBG3Q68DQ2 2970 aa4.93□□□□□ -1.62
CIITA-201ENST00000324288 TENM3Q9P273 2699 aa4.93□□□□□ -1.62
CIITA-201ENST00000324288 S4R3F8 94 aa4.93□□□□□ -1.62
CIITA-201ENST00000324288 FRYQ5TBA9 3013 aa4.91□□□□□ -1.62
CIITA-201ENST00000324288 KLK9Q2XQG4 91 aa4.91□□□□□ -1.62
CIITA-201ENST00000324288 PRUNE2Q8WUY3 3088 aa4.9□□□□□ -1.62
CIITA-201ENST00000324288 MMP24-AS1A0A0U1RRL7 71 aa4.9□□□□□ -1.62
CIITA-201ENST00000324288 DMXL2Q8TDJ6 3036 aa4.9□□□□□ -1.62
CIITA-201ENST00000324288 Q5W150 140 aa4.9□□□□□ -1.63
CIITA-201ENST00000324288 NBEAQ8NFP9 2946 aa4.89□□□□□ -1.63
CIITA-201ENST00000324288 PDZD2O15018 2839 aa4.89□□□□□ -1.63
CIITA-201ENST00000324288 UTRNP46939 3433 aa4.88□□□□□ -1.63
CIITA-201ENST00000324288 ZCCHC13Q8WW36 166 aaKnown RBP4.88□□□□□ -1.63
CIITA-201ENST00000324288 Q8NDZ9 215 aa4.87□□□□□ -1.63
CIITA-201ENST00000324288 FRYLO94915 3013 aa4.86□□□□□ -1.63
CIITA-201ENST00000324288 ROMO1P60602 79 aa4.85□□□□□ -1.63
CIITA-201ENST00000324288 TACC2O95359 2948 aa4.85□□□□□ -1.63
CIITA-201ENST00000324288 FREM2Q5SZK8 3169 aa4.84□□□□□ -1.64
CIITA-201ENST00000324288 H1FX-AS1Q4G0G2 97 aa4.83□□□□□ -1.64
CIITA-201ENST00000324288 SPATA8Q6RVD6 105 aa4.83□□□□□ -1.64
CIITA-201ENST00000324288 COL12A1Q99715 3063 aa4.82□□□□□ -1.64
CIITA-201ENST00000324288 KRTAP1-3Q8IUG1 177 aa4.82□□□□□ -1.64
CIITA-201ENST00000324288 KRTAP16-1A8MUX0 517 aa4.82□□□□□ -1.64
CIITA-201ENST00000324288 R4GN34 69 aa4.81□□□□□ -1.64
CIITA-201ENST00000324288 KRTAP1-1Q07627 177 aa4.79□□□□□ -1.64
CIITA-201ENST00000324288 RPL37P61927 97 aaKnown RBP4.78□□□□□ -1.64
CIITA-201ENST00000324288 ADM2Q7Z4H4 148 aa4.78□□□□□ -1.64
CIITA-201ENST00000324288 M0QZ58 72 aa4.77□□□□□ -1.65
CIITA-201ENST00000324288 NDUFAF8A1L188 74 aa4.77□□□□□ -1.65
CIITA-201ENST00000324288 Q5VSD8 79 aa4.75□□□□□ -1.65
CIITA-201ENST00000324288 DCHS2Q6V1P9 2916 aa4.75□□□□□ -1.65
CIITA-201ENST00000324288 LINC00472Q9H8W2 130 aa4.75□□□□□ -1.65
CIITA-201ENST00000324288 ZANQ9Y493 2812 aa4.74□□□□□ -1.65
CIITA-201ENST00000324288 A8MU10 97 aa4.74□□□□□ -1.65
CIITA-201ENST00000324288 SRRM2Q9UQ35 2752 aaKnown RBP4.74□□□□□ -1.65
CIITA-201ENST00000324288 PKD1L1Q8TDX9 2849 aa4.72□□□□□ -1.65
CIITA-201ENST00000324288 PLAC4Q8WY50 150 aa4.72□□□□□ -1.65
CIITA-201ENST00000324288 TGP01266 2768 aa4.72□□□□□ -1.65
CIITA-201ENST00000324288 PLAC8Q9NZF1 115 aa4.72□□□□□ -1.65
CIITA-201ENST00000324288 KRTAP26-1Q6PEX3 210 aa4.72□□□□□ -1.65
CIITA-201ENST00000324288 VWFP04275 2813 aa4.72□□□□□ -1.65
CIITA-201ENST00000324288 ZZEF1O43149 2961 aa4.71□□□□□ -1.66
CIITA-201ENST00000324288 TNRC18O15417 2968 aaPredicted RBP4.71□□□□□ -1.66
CIITA-201ENST00000324288 FBN2P35556 2912 aa4.71□□□□□ -1.66
CIITA-201ENST00000324288 KRTAP1-5Q9BYS1 174 aa4.7□□□□□ -1.66
CIITA-201ENST00000324288 KRTAP10-1P60331 282 aa4.7□□□□□ -1.66
CIITA-201ENST00000324288 WDFY4Q6ZS81 3184 aa4.69□□□□□ -1.66
CIITA-201ENST00000324288 VPS13AQ96RL7 3174 aa4.69□□□□□ -1.66
CIITA-201ENST00000324288 A6NN06 94 aa4.69□□□□□ -1.66
CIITA-201ENST00000324288 SEC61BP60468 96 aaKnown RBP4.69□□□□□ -1.66
CIITA-201ENST00000324288 SPRR1AP35321 89 aa4.68□□□□□ -1.66
CIITA-201ENST00000324288 KRTAP10-2P60368 255 aa4.68□□□□□ -1.66
CIITA-201ENST00000324288 TENM4Q6N022 2769 aa4.67□□□□□ -1.66
CIITA-201ENST00000324288 C20orf166-AS1Q96NR2 134 aa4.67□□□□□ -1.66
CIITA-201ENST00000324288 KRTAP25-1Q3LHN0 102 aa4.66□□□□□ -1.66
CIITA-201ENST00000324288 Q6ZR54 194 aa4.65□□□□□ -1.66
CIITA-201ENST00000324288 A0A087X002 238 aa4.65□□□□□ -1.67
CIITA-201ENST00000324288 NOTCH2NLQ7Z3S9 236 aa4.65□□□□□ -1.67
CIITA-201ENST00000324288 RANBP2P49792 3224 aaKnown RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms