RNA–Protein interactions for RNA: ENST00000316087.12

SPATA9-202, Transcript of spermatogenesis associated 9, humanhuman

TSL 1 (best)

Gene SPATA9, Length 1,583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA9-202ENST00000316087 PRR15Q8IV56 129 aa3.97□□□□□ -1.77
SPATA9-202ENST00000316087 LINC00474Q9P2X8 69 aa3.97□□□□□ -1.77
SPATA9-202ENST00000316087 LINC00588Q9Y4M8 146 aa3.97□□□□□ -1.77
SPATA9-202ENST00000316087 HIVEP2P31629 2446 aa3.96□□□□□ -1.78
SPATA9-202ENST00000316087 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.96□□□□□ -1.78
SPATA9-202ENST00000316087 SPRR1BP22528 89 aa3.96□□□□□ -1.78
SPATA9-202ENST00000316087 C1orf64Q8NEQ6 169 aa3.96□□□□□ -1.78
SPATA9-202ENST00000316087 LIMD2Q9BT23 127 aa3.96□□□□□ -1.78
SPATA9-202ENST00000316087 RPL37AP61513 92 aaKnown RBP3.95□□□□□ -1.78
SPATA9-202ENST00000316087 IGFL1Q6UW32 110 aa3.95□□□□□ -1.78
SPATA9-202ENST00000316087 ST20-AS1Q8NBB2 130 aa3.95□□□□□ -1.78
SPATA9-202ENST00000316087 PRAC1Q96KF2 57 aa3.95□□□□□ -1.78
SPATA9-202ENST00000316087 PDZD2O15018 2839 aa3.95□□□□□ -1.78
SPATA9-202ENST00000316087 TRAV22A0A0B4J277 110 aa3.94□□□□□ -1.78
SPATA9-202ENST00000316087 UBE2AP49459 152 aa3.94□□□□□ -1.78
SPATA9-202ENST00000316087 TP53AIP1Q9HCN2 124 aa3.94□□□□□ -1.78
SPATA9-202ENST00000316087 SONP18583 2426 aaKnown RBP3.94□□□□□ -1.78
SPATA9-202ENST00000316087 GCN1Q92616 2671 aaKnown RBP3.94□□□□□ -1.78
SPATA9-202ENST00000316087 A8MWP4 228 aa3.93□□□□□ -1.78
SPATA9-202ENST00000316087 KRTAP10-11P60412 298 aa3.93□□□□□ -1.78
SPATA9-202ENST00000316087 CASC2Q6XLA1 102 aa3.93□□□□□ -1.78
SPATA9-202ENST00000316087 B9D2Q9BPU9 175 aa3.93□□□□□ -1.78
SPATA9-202ENST00000316087 NF1P21359 2839 aa3.93□□□□□ -1.78
SPATA9-202ENST00000316087 A0A087WSZ3 146 aa3.93□□□□□ -1.78
SPATA9-202ENST00000316087 FAM168BA1KXE4 195 aa3.93□□□□□ -1.78
SPATA9-202ENST00000316087 FAM229BQ4G0N7 80 aa3.93□□□□□ -1.78
SPATA9-202ENST00000316087 KRTAP29-1A8MX34 341 aaPredicted RBP3.92□□□□□ -1.78
SPATA9-202ENST00000316087 KMT2BQ9UMN6 2715 aaPredicted RBP3.92□□□□□ -1.78
SPATA9-202ENST00000316087 NBPF19A0A087WUL8 3843 aa3.91□□□□□ -1.78
SPATA9-202ENST00000316087 H0Y9P7 68 aa3.91□□□□□ -1.78
SPATA9-202ENST00000316087 LINC00208Q96KT6 92 aa3.91□□□□□ -1.78
SPATA9-202ENST00000316087 FN1P02751 2386 aaKnown RBP3.91□□□□□ -1.78
SPATA9-202ENST00000316087 CCDC168Q8NDH2 2452 aa3.9□□□□□ -1.78
SPATA9-202ENST00000316087 MOBPQ13875 183 aa3.9□□□□□ -1.78
SPATA9-202ENST00000316087 KRTAP7-1Q8IUC3 87 aa3.9□□□□□ -1.78
SPATA9-202ENST00000316087 WFDC13Q8IUB5 93 aa3.89□□□□□ -1.79
SPATA9-202ENST00000316087 ZNF706Q9Y5V0 76 aaPredicted RBP3.89□□□□□ -1.79
SPATA9-202ENST00000316087 NIPBLQ6KC79 2804 aaeCLIP3.89□□□□□ -1.79
SPATA9-202ENST00000316087 A0A096LNI7 61 aa3.89□□□□□ -1.79
SPATA9-202ENST00000316087 LINC00472Q9H8W2 130 aa3.89□□□□□ -1.79
SPATA9-202ENST00000316087 ZFYVE26Q68DK2 2539 aa3.88□□□□□ -1.79
SPATA9-202ENST00000316087 ZNF469Q96JG9 3925 aaPredicted RBP3.88□□□□□ -1.79
SPATA9-202ENST00000316087 PRLHP81277 87 aa3.88□□□□□ -1.79
SPATA9-202ENST00000316087 IGLV7-46A0A075B6I9 117 aa3.87□□□□□ -1.79
SPATA9-202ENST00000316087 PMAIP1Q13794 54 aa3.87□□□□□ -1.79
SPATA9-202ENST00000316087 UBE2DNLQ8IWF7 75 aa3.87□□□□□ -1.79
SPATA9-202ENST00000316087 C9orf163Q8N9P6 203 aa3.87□□□□□ -1.79
SPATA9-202ENST00000316087 NBEAL2Q6ZNJ1 2754 aa3.87□□□□□ -1.79
SPATA9-202ENST00000316087 SETD2Q9BYW2 2564 aaPredicted RBP3.87□□□□□ -1.79
SPATA9-202ENST00000316087 IGKV2-24A0A0C4DH68 120 aa3.86□□□□□ -1.79
SPATA9-202ENST00000316087 NDUFS5O43920 106 aa3.86□□□□□ -1.79
SPATA9-202ENST00000316087 MTORP42345 2549 aa3.86□□□□□ -1.79
SPATA9-202ENST00000316087 C8orf87E5RJ46 101 aa3.85□□□□□ -1.79
SPATA9-202ENST00000316087 CASC10Q5T4H9 136 aa3.85□□□□□ -1.79
SPATA9-202ENST00000316087 NOTCH2Q04721 2471 aa3.85□□□□□ -1.79
SPATA9-202ENST00000316087 UNC79Q9P2D8 2635 aa3.85□□□□□ -1.79
SPATA9-202ENST00000316087 LOC101927531A0A1B0GV80 90 aa3.85□□□□□ -1.79
SPATA9-202ENST00000316087 A0A1W2PNN7 141 aa3.85□□□□□ -1.79
SPATA9-202ENST00000316087 PSPHP1O15172 72 aa3.85□□□□□ -1.79
SPATA9-202ENST00000316087 Q8N9P0 234 aaPredicted RBP3.85□□□□□ -1.79
SPATA9-202ENST00000316087 CUBNO60494 3623 aa3.84□□□□□ -1.79
SPATA9-202ENST00000316087 MMP24-AS1A0A0U1RRL7 71 aa3.84□□□□□ -1.8
SPATA9-202ENST00000316087 ASB16-AS1Q495Z4 193 aa3.84□□□□□ -1.8
SPATA9-202ENST00000316087 ATP11AUNQ6ZP68 121 aa3.84□□□□□ -1.8
SPATA9-202ENST00000316087 Q6ZR54 194 aa3.84□□□□□ -1.8
SPATA9-202ENST00000316087 ACANP16112 2415 aa3.83□□□□□ -1.8
SPATA9-202ENST00000316087 TENM4Q6N022 2769 aa3.83□□□□□ -1.8
SPATA9-202ENST00000316087 ANK3Q12955 4377 aaKnown RBP3.83□□□□□ -1.8
SPATA9-202ENST00000316087 LRCOL1A6NCL2 159 aa3.83□□□□□ -1.8
SPATA9-202ENST00000316087 CHKB-CPT1BH3BT56 60 aa3.83□□□□□ -1.8
SPATA9-202ENST00000316087 DEFB116Q30KQ4 102 aa3.83□□□□□ -1.8
SPATA9-202ENST00000316087 KRTAP24-1Q3LI83 254 aa3.83□□□□□ -1.8
SPATA9-202ENST00000316087 LINC00483Q53H64 154 aa3.83□□□□□ -1.8
SPATA9-202ENST00000316087 A8MUN3 132 aa3.82□□□□□ -1.8
SPATA9-202ENST00000316087 Q5VV11 94 aa3.82□□□□□ -1.8
SPATA9-202ENST00000316087 KRTAP13-1Q8IUC0 172 aa3.82□□□□□ -1.8
SPATA9-202ENST00000316087 TEP1Q99973 2627 aaKnown RBP3.82□□□□□ -1.8
SPATA9-202ENST00000316087 HIVEP1P15822 2718 aa3.81□□□□□ -1.8
SPATA9-202ENST00000316087 PRR4Q16378 134 aa3.81□□□□□ -1.8
SPATA9-202ENST00000316087 PHF5AQ7RTV0 110 aaKnown RBP3.81□□□□□ -1.8
SPATA9-202ENST00000316087 COA5Q86WW8 74 aa3.81□□□□□ -1.8
SPATA9-202ENST00000316087 NSD1Q96L73 2696 aaPredicted RBP3.81□□□□□ -1.8
SPATA9-202ENST00000316087 A0A1B0GVX0 72 aa3.8□□□□□ -1.8
SPATA9-202ENST00000316087 NUPR2A6NF83 97 aa3.8□□□□□ -1.8
SPATA9-202ENST00000316087 PRR15LQ9BU68 103 aa3.8□□□□□ -1.8
SPATA9-202ENST00000316087 C8orf17Q9NRJ1 99 aa3.8□□□□□ -1.8
SPATA9-202ENST00000316087 LINC01558Q9Y6Z2 57 aa3.8□□□□□ -1.8
SPATA9-202ENST00000316087 NOTCH2NLQ7Z3S9 236 aa3.8□□□□□ -1.8
SPATA9-202ENST00000316087 MRPL34Q9BQ48 92 aaKnown RBP3.8□□□□□ -1.8
SPATA9-202ENST00000316087 KRTAP3-1Q9BYR8 98 aa3.8□□□□□ -1.8
SPATA9-202ENST00000316087 CDC42SE1Q9NRR8 79 aa3.8□□□□□ -1.8
SPATA9-202ENST00000316087 RBM12B-AS1Q9P1G2 102 aa3.8□□□□□ -1.8
SPATA9-202ENST00000316087 APLNQ9ULZ1 77 aa3.8□□□□□ -1.8
SPATA9-202ENST00000316087 VWFP04275 2813 aa3.8□□□□□ -1.8
SPATA9-202ENST00000316087 ITPR2Q14571 2701 aa3.79□□□□□ -1.8
SPATA9-202ENST00000316087 NBDYA0A0U1RRE5 68 aa3.79□□□□□ -1.8
SPATA9-202ENST00000316087 A6NED7 52 aa3.79□□□□□ -1.8
SPATA9-202ENST00000316087 K7EIL1 84 aa3.79□□□□□ -1.8
SPATA9-202ENST00000316087 KTN1-AS1Q86SY8 53 aa3.78□□□□□ -1.8
SPATA9-202ENST00000316087 SPACA4Q8TDM5 124 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms