RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 M0R143 59 aa5.26□□□□□ -1.57
PDE4D-201ENST00000309641 PSMB2P49721 201 aa5.26□□□□□ -1.57
PDE4D-201ENST00000309641 BATFQ16520 125 aa5.26□□□□□ -1.57
PDE4D-201ENST00000309641 C9orf153Q5TBE3 101 aa5.26□□□□□ -1.57
PDE4D-201ENST00000309641 NAA38Q9BRA0 125 aaKnown RBP5.26□□□□□ -1.57
PDE4D-201ENST00000309641 H0YGX0 51 aa5.25□□□□□ -1.57
PDE4D-201ENST00000309641 A0A0G2JQZ4 141 aa5.24□□□□□ -1.57
PDE4D-201ENST00000309641 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.24□□□□□ -1.57
PDE4D-201ENST00000309641 LAMTOR3Q9UHA4 124 aa5.24□□□□□ -1.57
PDE4D-201ENST00000309641 SSBP3-AS1Q7Z2R9 100 aa5.23□□□□□ -1.57
PDE4D-201ENST00000309641 RETNLBQ9BQ08 111 aa5.22□□□□□ -1.57
PDE4D-201ENST00000309641 LRP2P98164 4655 aa5.21□□□□□ -1.58
PDE4D-201ENST00000309641 LPAP08519 4548 aa5.2□□□□□ -1.58
PDE4D-201ENST00000309641 COX6CP09669 75 aa5.2□□□□□ -1.58
PDE4D-201ENST00000309641 SCGB1C2P0DMR2 95 aa5.2□□□□□ -1.58
PDE4D-201ENST00000309641 LCE2AQ5TA79 106 aaPredicted RBP5.2□□□□□ -1.58
PDE4D-201ENST00000309641 HRCT1Q6UXD1 115 aa5.2□□□□□ -1.58
PDE4D-201ENST00000309641 SNHG12Q9BXW3 62 aa5.2□□□□□ -1.58
PDE4D-201ENST00000309641 C4orf48Q5BLP8 95 aa5.19□□□□□ -1.58
PDE4D-201ENST00000309641 A0A1B0GX51 115 aa5.19□□□□□ -1.58
PDE4D-201ENST00000309641 PCP4L1A6NKN8 68 aa5.19□□□□□ -1.58
PDE4D-201ENST00000309641 SPAG11AQ6PDA7 123 aa5.19□□□□□ -1.58
PDE4D-201ENST00000309641 H3BUT2 72 aa5.18□□□□□ -1.58
PDE4D-201ENST00000309641 LST1O00453 97 aa5.18□□□□□ -1.58
PDE4D-201ENST00000309641 SPINK1P00995 79 aa5.18□□□□□ -1.58
PDE4D-201ENST00000309641 TAX1BP3O14907 124 aa5.18□□□□□ -1.58
PDE4D-201ENST00000309641 SNCGO76070 127 aa5.18□□□□□ -1.58
PDE4D-201ENST00000309641 TCL1BO95988 128 aa5.18□□□□□ -1.58
PDE4D-201ENST00000309641 PRR4Q16378 134 aa5.18□□□□□ -1.58
PDE4D-201ENST00000309641 FABP2P12104 132 aa5.17□□□□□ -1.58
PDE4D-201ENST00000309641 OCIAD2Q56VL3 154 aa5.17□□□□□ -1.58
PDE4D-201ENST00000309641 IGLV8-61A0A075B6I0 122 aa5.16□□□□□ -1.58
PDE4D-201ENST00000309641 F8WEM9 126 aa5.16□□□□□ -1.58
PDE4D-201ENST00000309641 DNAL4O96015 105 aa5.16□□□□□ -1.58
PDE4D-201ENST00000309641 NDUFV3P56181 108 aaKnown RBP5.16□□□□□ -1.58
PDE4D-201ENST00000309641 IGFL1Q6UW32 110 aa5.16□□□□□ -1.58
PDE4D-201ENST00000309641 PPDPFLQ8WWR9 84 aa5.16□□□□□ -1.58
PDE4D-201ENST00000309641 A0A1B0GV72 72 aa5.16□□□□□ -1.58
PDE4D-201ENST00000309641 TRACP01848 142 aa5.16□□□□□ -1.58
PDE4D-201ENST00000309641 ORMDL1Q9P0S3 153 aa5.16□□□□□ -1.58
PDE4D-201ENST00000309641 C9orf118A6NHY6 69 aa5.14□□□□□ -1.59
PDE4D-201ENST00000309641 H3BMG7 143 aa5.13□□□□□ -1.59
PDE4D-201ENST00000309641 RPS29P62273 56 aaKnown RBP5.13□□□□□ -1.59
PDE4D-201ENST00000309641 CD164Q04900 197 aa5.13□□□□□ -1.59
PDE4D-201ENST00000309641 UBR4Q5T4S7 5183 aa5.12□□□□□ -1.59
PDE4D-201ENST00000309641 A0A1W2PPM0 123 aa5.12□□□□□ -1.59
PDE4D-201ENST00000309641 ATXN8Q156A1 80 aa5.12□□□□□ -1.59
PDE4D-201ENST00000309641 Q6JHZ5 121 aa5.12□□□□□ -1.59
PDE4D-201ENST00000309641 TMEM256-PLSCR3K7ERE1 68 aa5.11□□□□□ -1.59
PDE4D-201ENST00000309641 BAALC-AS2P0C853 105 aa5.11□□□□□ -1.59
PDE4D-201ENST00000309641 IGLV7-46A0A075B6I9 117 aa5.11□□□□□ -1.59
PDE4D-201ENST00000309641 GHRHP01286 108 aa5.1□□□□□ -1.59
PDE4D-201ENST00000309641 COL5A1-AS1Q5SY13 56 aa5.1□□□□□ -1.59
PDE4D-201ENST00000309641 UBE2V1Q13404 147 aa5.09□□□□□ -1.59
PDE4D-201ENST00000309641 MTURNQ8N3F0 131 aa5.09□□□□□ -1.59
PDE4D-201ENST00000309641 TRBV20-1A0A075B6N2 111 aa5.09□□□□□ -1.6
PDE4D-201ENST00000309641 TRBV7-7A0A0K0K1E9 115 aa5.09□□□□□ -1.6
PDE4D-201ENST00000309641 A0A1W2PNM2 257 aa5.09□□□□□ -1.6
PDE4D-201ENST00000309641 C9JAW5 83 aa5.09□□□□□ -1.6
PDE4D-201ENST00000309641 LYRM7Q5U5X0 104 aa5.09□□□□□ -1.6
PDE4D-201ENST00000309641 LIMD2Q9BT23 127 aa5.09□□□□□ -1.6
PDE4D-201ENST00000309641 ANKRD29Q8N6D5 301 aa5.08□□□□□ -1.6
PDE4D-201ENST00000309641 H3BQ85 93 aa5.07□□□□□ -1.6
PDE4D-201ENST00000309641 C1orf195Q5TG92 126 aa5.07□□□□□ -1.6
PDE4D-201ENST00000309641 Q5XG85 94 aa5.07□□□□□ -1.6
PDE4D-201ENST00000309641 FP248Q71RG6 208 aaPredicted RBP5.07□□□□□ -1.6
PDE4D-201ENST00000309641 TEN1Q86WV5 123 aa5.06□□□□□ -1.6
PDE4D-201ENST00000309641 SPCS1Q9Y6A9 102 aa5.06□□□□□ -1.6
PDE4D-201ENST00000309641 TPRXLQ17RH7 258 aa5.06□□□□□ -1.6
PDE4D-201ENST00000309641 A0A087WSZ3 146 aa5.05□□□□□ -1.6
PDE4D-201ENST00000309641 TRBV7-4A0A0J9YYF1 115 aa5.05□□□□□ -1.6
PDE4D-201ENST00000309641 KRTAP13-3Q3SY46 172 aa5.05□□□□□ -1.6
PDE4D-201ENST00000309641 Q6Q795 121 aa5.05□□□□□ -1.6
PDE4D-201ENST00000309641 RBM3P98179 157 aaKnown RBP5.04□□□□□ -1.6
PDE4D-201ENST00000309641 CCKP06307 115 aa5.04□□□□□ -1.6
PDE4D-201ENST00000309641 KRTAP4-8Q9BYQ9 185 aa5.03□□□□□ -1.6
PDE4D-201ENST00000309641 RNF213Q63HN8 5207 aa5.03□□□□□ -1.6
PDE4D-201ENST00000309641 SMCPP49901 116 aaPredicted RBP5.02□□□□□ -1.61
PDE4D-201ENST00000309641 VPS25Q9BRG1 176 aa5.02□□□□□ -1.61
PDE4D-201ENST00000309641 CDIP1Q9H305 208 aa5.02□□□□□ -1.61
PDE4D-201ENST00000309641 ASB16-AS1Q495Z4 193 aa5.02□□□□□ -1.61
PDE4D-201ENST00000309641 DSCR8Q96T75 97 aa5.02□□□□□ -1.61
PDE4D-201ENST00000309641 C14orf132Q9NPU4 83 aa5.02□□□□□ -1.61
PDE4D-201ENST00000309641 K7EP34 96 aa5.01□□□□□ -1.61
PDE4D-201ENST00000309641 OBSCN-AS1Q96MR7 158 aa5.01□□□□□ -1.61
PDE4D-201ENST00000309641 C9orf92A6NGG3 77 aa5.01□□□□□ -1.61
PDE4D-201ENST00000309641 H3BT86 120 aa5.01□□□□□ -1.61
PDE4D-201ENST00000309641 Q96NJ1 140 aa5.01□□□□□ -1.61
PDE4D-201ENST00000309641 PRO0461Q9UI25 63 aa5.01□□□□□ -1.61
PDE4D-201ENST00000309641 JMJD7-PLA2G4BH0Y9G9 81 aa5□□□□□ -1.61
PDE4D-201ENST00000309641 Q6ZQT0 140 aa5□□□□□ -1.61
PDE4D-201ENST00000309641 SS18L2Q9UHA2 77 aa4.99□□□□□ -1.61
PDE4D-201ENST00000309641 MUC2Q02817 5179 aa4.98□□□□□ -1.61
PDE4D-201ENST00000309641 LOC110117498A0A087WWA1 95 aa4.98□□□□□ -1.61
PDE4D-201ENST00000309641 DEFB116Q30KQ4 102 aa4.98□□□□□ -1.61
PDE4D-201ENST00000309641 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.97□□□□□ -1.61
PDE4D-201ENST00000309641 XP32Q5T750 250 aa4.97□□□□□ -1.61
PDE4D-201ENST00000309641 LINC00472Q9H8W2 130 aa4.96□□□□□ -1.62
PDE4D-201ENST00000309641 GTF2H5Q6ZYL4 71 aa4.95□□□□□ -1.62
PDE4D-201ENST00000309641 IGKV4-1P06312 121 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms