RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 COX6CP09669 75 aa11.36□□□□□ -0.59
VEGFB-201ENST00000309422 LINC01547P58512 204 aaPredicted RBP11.35□□□□□ -0.59
VEGFB-201ENST00000309422 OCIAD2Q56VL3 154 aa11.35□□□□□ -0.59
VEGFB-201ENST00000309422 Q8N377 158 aa11.35□□□□□ -0.59
VEGFB-201ENST00000309422 HRCT1Q6UXD1 115 aa11.34□□□□□ -0.59
VEGFB-201ENST00000309422 SNHG12Q9BXW3 62 aa11.33□□□□□ -0.6
VEGFB-201ENST00000309422 A0A1B0GX51 115 aa11.32□□□□□ -0.6
VEGFB-201ENST00000309422 LRP2P98164 4655 aa11.32□□□□□ -0.6
VEGFB-201ENST00000309422 CD164Q04900 197 aa11.32□□□□□ -0.6
VEGFB-201ENST00000309422 SMIM29Q86T20 159 aa11.32□□□□□ -0.6
VEGFB-201ENST00000309422 K7ERJ3 54 aa11.31□□□□□ -0.6
VEGFB-201ENST00000309422 M0R143 59 aa11.31□□□□□ -0.6
VEGFB-201ENST00000309422 DNAL4O96015 105 aa11.31□□□□□ -0.6
VEGFB-201ENST00000309422 TSTD3H0UI37 97 aa11.3□□□□□ -0.6
VEGFB-201ENST00000309422 Q6JHZ5 121 aa11.29□□□□□ -0.6
VEGFB-201ENST00000309422 CDIP1Q9H305 208 aa11.29□□□□□ -0.6
VEGFB-201ENST00000309422 UBR4Q5T4S7 5183 aa11.29□□□□□ -0.6
VEGFB-201ENST00000309422 TRIAP1O43715 76 aa11.28□□□□□ -0.6
VEGFB-201ENST00000309422 TPRXLQ17RH7 258 aa11.28□□□□□ -0.6
VEGFB-201ENST00000309422 LPAP08519 4548 aa11.25□□□□□ -0.61
VEGFB-201ENST00000309422 SCGB1C2P0DMR2 95 aa11.24□□□□□ -0.61
VEGFB-201ENST00000309422 CLEC2BQ92478 149 aa11.24□□□□□ -0.61
VEGFB-201ENST00000309422 FAM218AQ96MZ4 157 aa11.24□□□□□ -0.61
VEGFB-201ENST00000309422 H3BQ85 93 aa11.23□□□□□ -0.61
VEGFB-201ENST00000309422 TCL1BO95988 128 aa11.22□□□□□ -0.61
VEGFB-201ENST00000309422 FABP2P12104 132 aa11.22□□□□□ -0.61
VEGFB-201ENST00000309422 ORMDL1Q9P0S3 153 aa11.2□□□□□ -0.62
VEGFB-201ENST00000309422 IGLV8-61A0A075B6I0 122 aa11.18□□□□□ -0.62
VEGFB-201ENST00000309422 LOC105371267A0A1B0GV96 52 aa11.16□□□□□ -0.62
VEGFB-201ENST00000309422 NDUFV3P56181 108 aaKnown RBP11.16□□□□□ -0.62
VEGFB-201ENST00000309422 Q5XG85 94 aa11.16□□□□□ -0.62
VEGFB-201ENST00000309422 IGFL1Q6UW32 110 aa11.16□□□□□ -0.62
VEGFB-201ENST00000309422 A0A0G2JQZ4 141 aa11.15□□□□□ -0.63
VEGFB-201ENST00000309422 H3BUT2 72 aa11.15□□□□□ -0.63
VEGFB-201ENST00000309422 H3BMG7 143 aa11.13□□□□□ -0.63
VEGFB-201ENST00000309422 TMEM256-PLSCR3K7ERE1 68 aa11.13□□□□□ -0.63
VEGFB-201ENST00000309422 LYRM7Q5U5X0 104 aa11.13□□□□□ -0.63
VEGFB-201ENST00000309422 TRBV7-7A0A0K0K1E9 115 aa11.11□□□□□ -0.63
VEGFB-201ENST00000309422 TRACP01848 142 aa11.11□□□□□ -0.63
VEGFB-201ENST00000309422 BATFQ16520 125 aa11.11□□□□□ -0.63
VEGFB-201ENST00000309422 KRTAP13-3Q3SY46 172 aa11.1□□□□□ -0.63
VEGFB-201ENST00000309422 SS18L2Q9UHA2 77 aa11.1□□□□□ -0.63
VEGFB-201ENST00000309422 LST1O00453 97 aa11.08□□□□□ -0.64
VEGFB-201ENST00000309422 ATXN8Q156A1 80 aa11.05□□□□□ -0.64
VEGFB-201ENST00000309422 TEN1Q86WV5 123 aa11.05□□□□□ -0.64
VEGFB-201ENST00000309422 C1orf195Q5TG92 126 aa11.03□□□□□ -0.64
VEGFB-201ENST00000309422 UBE2V1Q13404 147 aa11.03□□□□□ -0.64
VEGFB-201ENST00000309422 ANKRD29Q8N6D5 301 aa11.03□□□□□ -0.64
VEGFB-201ENST00000309422 A0A1B0GV72 72 aa11.02□□□□□ -0.65
VEGFB-201ENST00000309422 ASB16-AS1Q495Z4 193 aa11.02□□□□□ -0.65
VEGFB-201ENST00000309422 Q6Q795 121 aa11.02□□□□□ -0.65
VEGFB-201ENST00000309422 A0A0U1RQV1 116 aa11□□□□□ -0.65
VEGFB-201ENST00000309422 SEC61BP60468 96 aaKnown RBP11□□□□□ -0.65
VEGFB-201ENST00000309422 NAA38Q9BRA0 125 aaKnown RBP10.99□□□□□ -0.65
VEGFB-201ENST00000309422 RNF213Q63HN8 5207 aa10.99□□□□□ -0.65
VEGFB-201ENST00000309422 C9orf92A6NGG3 77 aa10.98□□□□□ -0.65
VEGFB-201ENST00000309422 A0A087WSZ3 146 aa10.97□□□□□ -0.65
VEGFB-201ENST00000309422 DSCR8Q96T75 97 aa10.96□□□□□ -0.65
VEGFB-201ENST00000309422 TRBV20-1A0A075B6N2 111 aa10.95□□□□□ -0.66
VEGFB-201ENST00000309422 BAALC-AS2P0C853 105 aa10.95□□□□□ -0.66
VEGFB-201ENST00000309422 RBM3P98179 157 aaKnown RBP10.94□□□□□ -0.66
VEGFB-201ENST00000309422 XP32Q5T750 250 aa10.93□□□□□ -0.66
VEGFB-201ENST00000309422 MUC17Q685J3 4493 aa10.93□□□□□ -0.66
VEGFB-201ENST00000309422 TRBV7-4A0A0J9YYF1 115 aa10.92□□□□□ -0.66
VEGFB-201ENST00000309422 CCKP06307 115 aa10.91□□□□□ -0.66
VEGFB-201ENST00000309422 VPS25Q9BRG1 176 aa10.9□□□□□ -0.66
VEGFB-201ENST00000309422 A0A1W2PNM2 257 aa10.89□□□□□ -0.67
VEGFB-201ENST00000309422 C9orf118A6NHY6 69 aa10.89□□□□□ -0.67
VEGFB-201ENST00000309422 JMJD7-PLA2G4BH0Y9G9 81 aa10.88□□□□□ -0.67
VEGFB-201ENST00000309422 C21orf62-AS1Q17RA5 79 aa10.88□□□□□ -0.67
VEGFB-201ENST00000309422 C9JAW5 83 aa10.87□□□□□ -0.67
VEGFB-201ENST00000309422 SIGMAR1Q99720 223 aa10.85□□□□□ -0.67
VEGFB-201ENST00000309422 A0A1W2PPM0 123 aa10.83□□□□□ -0.68
VEGFB-201ENST00000309422 TAX1BP3O14907 124 aa10.82□□□□□ -0.68
VEGFB-201ENST00000309422 PDE6GP18545 87 aa10.81□□□□□ -0.68
VEGFB-201ENST00000309422 COL5A1-AS1Q5SY13 56 aa10.8□□□□□ -0.68
VEGFB-201ENST00000309422 OBSCN-AS1Q96MR7 158 aa10.78□□□□□ -0.68
VEGFB-201ENST00000309422 MUC2Q02817 5179 aa10.77□□□□□ -0.68
VEGFB-201ENST00000309422 H3BT86 120 aa10.77□□□□□ -0.69
VEGFB-201ENST00000309422 IGKV4-1P06312 121 aa10.77□□□□□ -0.69
VEGFB-201ENST00000309422 RPL37P61927 97 aaKnown RBP10.76□□□□□ -0.69
VEGFB-201ENST00000309422 SPCS1Q9Y6A9 102 aa10.76□□□□□ -0.69
VEGFB-201ENST00000309422 PCOTHQ58A44 107 aa10.74□□□□□ -0.69
VEGFB-201ENST00000309422 LOC110117498A0A087WWA1 95 aa10.73□□□□□ -0.69
VEGFB-201ENST00000309422 A0A1B0GW54 56 aa10.73□□□□□ -0.69
VEGFB-201ENST00000309422 Q96NJ1 140 aa10.73□□□□□ -0.69
VEGFB-201ENST00000309422 C14orf132Q9NPU4 83 aa10.72□□□□□ -0.69
VEGFB-201ENST00000309422 PCP4L1A6NKN8 68 aa10.71□□□□□ -0.69
VEGFB-201ENST00000309422 Q6ZQT0 140 aa10.7□□□□□ -0.7
VEGFB-201ENST00000309422 J3KT08 172 aa10.68□□□□□ -0.7
VEGFB-201ENST00000309422 ATP11AUNQ6ZP68 121 aa10.68□□□□□ -0.7
VEGFB-201ENST00000309422 Q75L30 129 aa10.67□□□□□ -0.7
VEGFB-201ENST00000309422 MTURNQ8N3F0 131 aa10.67□□□□□ -0.7
VEGFB-201ENST00000309422 DEFB116Q30KQ4 102 aa10.66□□□□□ -0.7
VEGFB-201ENST00000309422 LINC00472Q9H8W2 130 aa10.66□□□□□ -0.7
VEGFB-201ENST00000309422 DSCR10P59022 87 aa10.65□□□□□ -0.71
VEGFB-201ENST00000309422 LINC00313P59037 77 aa10.65□□□□□ -0.71
VEGFB-201ENST00000309422 NDUFB1O75438 58 aa10.64□□□□□ -0.71
VEGFB-201ENST00000309422 IGHV6-1A0A0B4J1U7 121 aa10.63□□□□□ -0.71
VEGFB-201ENST00000309422 C8orf87E5RJ46 101 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms