RNA–Protein interactions for RNA: ENST00000308249.3

PPM1E-201, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPM1E, Length 6,542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1E-201ENST00000308249 MGAM2Q2M2H8 2515 aa9.53□□□□□ -0.88
PPM1E-201ENST00000308249 PCSK5Q92824 1860 aa9.52□□□□□ -0.88
PPM1E-201ENST00000308249 Q8NDZ9 215 aa9.5□□□□□ -0.89
PPM1E-201ENST00000308249 LINC00472Q9H8W2 130 aa9.5□□□□□ -0.89
PPM1E-201ENST00000308249 CEP295Q9C0D2 2601 aa9.48□□□□□ -0.89
PPM1E-201ENST00000308249 KRTAP1-3Q8IUG1 177 aa9.43□□□□□ -0.9
PPM1E-201ENST00000308249 KRTAP26-1Q6PEX3 210 aa9.41□□□□□ -0.9
PPM1E-201ENST00000308249 KRTAP1-1Q07627 177 aa9.4□□□□□ -0.9
PPM1E-201ENST00000308249 SPRR1AP35321 89 aa9.39□□□□□ -0.91
PPM1E-201ENST00000308249 Q6ZR54 194 aa9.39□□□□□ -0.91
PPM1E-201ENST00000308249 KRTAP10-1P60331 282 aa9.38□□□□□ -0.91
PPM1E-201ENST00000308249 BPTFQ12830 3046 aa9.36□□□□□ -0.91
PPM1E-201ENST00000308249 EPG5Q9HCE0 2579 aa9.35□□□□□ -0.91
PPM1E-201ENST00000308249 KRTAP10-2P60368 255 aa9.33□□□□□ -0.92
PPM1E-201ENST00000308249 SPRR1BP22528 89 aa9.33□□□□□ -0.92
PPM1E-201ENST00000308249 PANO1I0J062 215 aa9.32□□□□□ -0.92
PPM1E-201ENST00000308249 A8MU10 97 aa9.3□□□□□ -0.92
PPM1E-201ENST00000308249 NDUFAF8A1L188 74 aa9.28□□□□□ -0.92
PPM1E-201ENST00000308249 KRTAP1-5Q9BYS1 174 aa9.28□□□□□ -0.92
PPM1E-201ENST00000308249 OXTP01178 125 aa9.27□□□□□ -0.93
PPM1E-201ENST00000308249 A8MUU9 505 aa9.25□□□□□ -0.93
PPM1E-201ENST00000308249 ATRQ13535 2644 aa9.25□□□□□ -0.93
PPM1E-201ENST00000308249 KRTAP25-1Q3LHN0 102 aa9.23□□□□□ -0.93
PPM1E-201ENST00000308249 C10orf95Q9H7T3 257 aa9.23□□□□□ -0.93
PPM1E-201ENST00000308249 LCE6AA0A183 80 aa9.22□□□□□ -0.93
PPM1E-201ENST00000308249 MKI67P46013 3256 aaKnown RBP9.21□□□□□ -0.94
PPM1E-201ENST00000308249 LAMA2P24043 3122 aaKnown RBP9.17□□□□□ -0.94
PPM1E-201ENST00000308249 DMBT1Q9UGM3 2413 aaPredicted RBP9.17□□□□□ -0.94
PPM1E-201ENST00000308249 BRCA2P51587 3418 aa9.16□□□□□ -0.94
PPM1E-201ENST00000308249 ASB16-AS1Q495Z4 193 aa9.16□□□□□ -0.94
PPM1E-201ENST00000308249 HECTD1Q9ULT8 2610 aa9.16□□□□□ -0.94
PPM1E-201ENST00000308249 A0A087X002 238 aa9.15□□□□□ -0.94
PPM1E-201ENST00000308249 MAST4O15021 2626 aa9.13□□□□□ -0.95
PPM1E-201ENST00000308249 FLNBO75369 2602 aaKnown RBP9.12□□□□□ -0.95
PPM1E-201ENST00000308249 NOTCH2NLQ7Z3S9 236 aa9.12□□□□□ -0.95
PPM1E-201ENST00000308249 TNP1P09430 55 aa9.08□□□□□ -0.96
PPM1E-201ENST00000308249 STAB1Q9NY15 2570 aa9.07□□□□□ -0.96
PPM1E-201ENST00000308249 RANBP2P49792 3224 aaKnown RBP9.06□□□□□ -0.96
PPM1E-201ENST00000308249 LAMA3Q16787 3333 aa9.04□□□□□ -0.96
PPM1E-201ENST00000308249 HTTP42858 3142 aa9.04□□□□□ -0.96
PPM1E-201ENST00000308249 KRTAP29-1A8MX34 341 aaPredicted RBP9.03□□□□□ -0.96
PPM1E-201ENST00000308249 C5orf42Q9H799 3197 aa9.01□□□□□ -0.97
PPM1E-201ENST00000308249 A6NN06 94 aa8.99□□□□□ -0.97
PPM1E-201ENST00000308249 STAB2Q8WWQ8 2551 aa8.97□□□□□ -0.97
PPM1E-201ENST00000308249 ITPR3Q14573 2671 aa8.94□□□□□ -0.98
PPM1E-201ENST00000308249 A0A0C4DFX4 3053 aa8.93□□□□□ -0.98
PPM1E-201ENST00000308249 NBEAL1Q6ZS30 2694 aa8.9□□□□□ -0.98
PPM1E-201ENST00000308249 KRTAP4-16G5E9R7 235 aaPredicted RBP8.9□□□□□ -0.98
PPM1E-201ENST00000308249 KRTAP10-8P60410 259 aa8.89□□□□□ -0.99
PPM1E-201ENST00000308249 PRUNE2Q8WUY3 3088 aa8.88□□□□□ -0.99
PPM1E-201ENST00000308249 UNC80Q8N2C7 3258 aa8.88□□□□□ -0.99
PPM1E-201ENST00000308249 CHD7Q9P2D1 2997 aa8.88□□□□□ -0.99
PPM1E-201ENST00000308249 CFAP46Q8IYW2 2715 aa8.87□□□□□ -0.99
PPM1E-201ENST00000308249 FLNAP21333 2647 aaKnown RBP8.85□□□□□ -0.99
PPM1E-201ENST00000308249 KRTAP11-1Q8IUC1 163 aa8.82□□□□□ -1
PPM1E-201ENST00000308249 A0A1B0GVY2 172 aa8.8□□□□□ -1
PPM1E-201ENST00000308249 PRRC2CQ9Y520 2896 aaKnown RBP8.76□□□□□ -1.01
PPM1E-201ENST00000308249 AKAP13Q12802 2813 aa8.76□□□□□ -1.01
PPM1E-201ENST00000308249 CDH23Q9H251 3354 aa8.76□□□□□ -1.01
PPM1E-201ENST00000308249 RPS29P62273 56 aaKnown RBP8.75□□□□□ -1.01
PPM1E-201ENST00000308249 KRTAP13-2Q52LG2 175 aa8.73□□□□□ -1.01
PPM1E-201ENST00000308249 TRIOO75962 3097 aa8.69□□□□□ -1.02
PPM1E-201ENST00000308249 XIRP2A4UGR9 3374 aa8.68□□□□□ -1.02
PPM1E-201ENST00000308249 P0C880 135 aa8.65□□□□□ -1.02
PPM1E-201ENST00000308249 Q6ZRN7 208 aaPredicted RBP8.64□□□□□ -1.03
PPM1E-201ENST00000308249 CHD9Q3L8U1 2897 aa8.64□□□□□ -1.03
PPM1E-201ENST00000308249 HELZ2Q9BYK8 2649 aaKnown RBP8.63□□□□□ -1.03
PPM1E-201ENST00000308249 PP632Q6XCG6 107 aa8.63□□□□□ -1.03
PPM1E-201ENST00000308249 CHD6Q8TD26 2715 aa8.61□□□□□ -1.03
PPM1E-201ENST00000308249 TEX15Q9BXT5 2789 aa8.56□□□□□ -1.04
PPM1E-201ENST00000308249 SZT2Q5T011 3432 aa8.56□□□□□ -1.04
PPM1E-201ENST00000308249 CENPEQ02224 2701 aa8.55□□□□□ -1.04
PPM1E-201ENST00000308249 KRTAP7-1Q8IUC3 87 aa8.55□□□□□ -1.04
PPM1E-201ENST00000308249 KRTAP10-10P60014 251 aa8.53□□□□□ -1.04
PPM1E-201ENST00000308249 NOTCH1P46531 2555 aa8.52□□□□□ -1.05
PPM1E-201ENST00000308249 SETXQ7Z333 2677 aaKnown RBP8.5□□□□□ -1.05
PPM1E-201ENST00000308249 UNC79Q9P2D8 2635 aa8.5□□□□□ -1.05
PPM1E-201ENST00000308249 TEP1Q99973 2627 aaKnown RBP8.49□□□□□ -1.05
PPM1E-201ENST00000308249 TRANK1O15050 2925 aa8.49□□□□□ -1.05
PPM1E-201ENST00000308249 VCANP13611 3396 aa8.46□□□□□ -1.05
PPM1E-201ENST00000308249 DNAH14Q0VDD8 3507 aa8.46□□□□□ -1.05
PPM1E-201ENST00000308249 KRTAP13-1Q8IUC0 172 aa8.44□□□□□ -1.06
PPM1E-201ENST00000308249 PRO2289Q9P1D8 64 aa8.43□□□□□ -1.06
PPM1E-201ENST00000308249 EYSQ5T1H1 3165 aa8.43□□□□□ -1.06
PPM1E-201ENST00000308249 VPS13AQ96RL7 3174 aa8.43□□□□□ -1.06
PPM1E-201ENST00000308249 COL6A5A8TX70 2615 aa8.42□□□□□ -1.06
PPM1E-201ENST00000308249 LAMA1P25391 3075 aa8.42□□□□□ -1.06
PPM1E-201ENST00000308249 CFAP54Q96N23 3096 aa8.41□□□□□ -1.06
PPM1E-201ENST00000308249 BAHCC1Q9P281 2608 aa8.41□□□□□ -1.06
PPM1E-201ENST00000308249 WDFY4Q6ZS81 3184 aa8.4□□□□□ -1.07
PPM1E-201ENST00000308249 SPEGQ15772 3267 aa8.39□□□□□ -1.07
PPM1E-201ENST00000308249 XP32Q5T750 250 aa8.38□□□□□ -1.07
PPM1E-201ENST00000308249 H0YAA0 97 aa8.35□□□□□ -1.07
PPM1E-201ENST00000308249 CELSR3Q9NYQ7 3312 aa8.35□□□□□ -1.07
PPM1E-201ENST00000308249 GCN1Q92616 2671 aaKnown RBP8.32□□□□□ -1.08
PPM1E-201ENST00000308249 COL6A3P12111 3177 aa8.32□□□□□ -1.08
PPM1E-201ENST00000308249 IGSF10Q6WRI0 2623 aa8.26□□□□□ -1.09
PPM1E-201ENST00000308249 KMT2BQ9UMN6 2715 aaPredicted RBP8.25□□□□□ -1.09
PPM1E-201ENST00000308249 REV3LO60673 3130 aa8.23□□□□□ -1.09
PPM1E-201ENST00000308249 FREM2Q5SZK8 3169 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms