RNA–Protein interactions for RNA: ENST00000303538.12

PDS5A-201, Transcript of PDS5 cohesin associated factor A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDS5A, Length 7,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5A-201ENST00000303538 TEX15Q9BXT5 2789 aa10.26□□□□□ -0.77
PDS5A-201ENST00000303538 MKI67P46013 3256 aaKnown RBP10.25□□□□□ -0.77
PDS5A-201ENST00000303538 OCR1Q9BZK8 76 aa10.22□□□□□ -0.77
PDS5A-201ENST00000303538 KRTAP10-2P60368 255 aa10.21□□□□□ -0.77
PDS5A-201ENST00000303538 TEP1Q99973 2627 aaKnown RBP10.21□□□□□ -0.78
PDS5A-201ENST00000303538 DMAC1Q96GE9 116 aa10.2□□□□□ -0.78
PDS5A-201ENST00000303538 CENPEQ02224 2701 aa10.2□□□□□ -0.78
PDS5A-201ENST00000303538 CHD6Q8TD26 2715 aa10.19□□□□□ -0.78
PDS5A-201ENST00000303538 KRTAP10-1P60331 282 aa10.19□□□□□ -0.78
PDS5A-201ENST00000303538 NBEAL1Q6ZS30 2694 aa10.18□□□□□ -0.78
PDS5A-201ENST00000303538 PLAC4Q8WY50 150 aa10.17□□□□□ -0.78
PDS5A-201ENST00000303538 MMP24-AS1A0A0U1RRL7 71 aa10.16□□□□□ -0.78
PDS5A-201ENST00000303538 Q5W150 140 aa10.16□□□□□ -0.78
PDS5A-201ENST00000303538 BRCA2P51587 3418 aa10.15□□□□□ -0.78
PDS5A-201ENST00000303538 M0QZ58 72 aa10.14□□□□□ -0.79
PDS5A-201ENST00000303538 KRTAP1-5Q9BYS1 174 aa10.12□□□□□ -0.79
PDS5A-201ENST00000303538 CFAP54Q96N23 3096 aa10.12□□□□□ -0.79
PDS5A-201ENST00000303538 Q8NDZ9 215 aa10.08□□□□□ -0.8
PDS5A-201ENST00000303538 SZT2Q5T011 3432 aa10.06□□□□□ -0.8
PDS5A-201ENST00000303538 PRAC1Q96KF2 57 aa10.05□□□□□ -0.8
PDS5A-201ENST00000303538 DMBT1Q9UGM3 2413 aaPredicted RBP10.04□□□□□ -0.8
PDS5A-201ENST00000303538 UNC79Q9P2D8 2635 aa10.03□□□□□ -0.8
PDS5A-201ENST00000303538 H1FX-AS1Q4G0G2 97 aa10.02□□□□□ -0.81
PDS5A-201ENST00000303538 A0A0C4DFX4 3053 aa10.01□□□□□ -0.81
PDS5A-201ENST00000303538 Q75L30 129 aa10.01□□□□□ -0.81
PDS5A-201ENST00000303538 ADM2Q7Z4H4 148 aa10□□□□□ -0.81
PDS5A-201ENST00000303538 STAB2Q8WWQ8 2551 aa9.99□□□□□ -0.81
PDS5A-201ENST00000303538 OXTP01178 125 aa9.98□□□□□ -0.81
PDS5A-201ENST00000303538 SPRR1AP35321 89 aa9.98□□□□□ -0.81
PDS5A-201ENST00000303538 DNAH14Q0VDD8 3507 aa9.98□□□□□ -0.81
PDS5A-201ENST00000303538 LINC00472Q9H8W2 130 aa9.97□□□□□ -0.81
PDS5A-201ENST00000303538 CELSR3Q9NYQ7 3312 aa9.96□□□□□ -0.81
PDS5A-201ENST00000303538 CDH23Q9H251 3354 aa9.96□□□□□ -0.82
PDS5A-201ENST00000303538 LINC01558Q9Y6Z2 57 aa9.95□□□□□ -0.82
PDS5A-201ENST00000303538 A0A0A0MQY5 61 aa9.95□□□□□ -0.82
PDS5A-201ENST00000303538 RPL37P61927 97 aaKnown RBP9.94□□□□□ -0.82
PDS5A-201ENST00000303538 COL6A5A8TX70 2615 aa9.91□□□□□ -0.82
PDS5A-201ENST00000303538 NOTCH1P46531 2555 aa9.9□□□□□ -0.82
PDS5A-201ENST00000303538 MGAQ8IWI9 3026 aa9.9□□□□□ -0.83
PDS5A-201ENST00000303538 LAMA3Q16787 3333 aa9.89□□□□□ -0.83
PDS5A-201ENST00000303538 SPATA8Q6RVD6 105 aa9.89□□□□□ -0.83
PDS5A-201ENST00000303538 LAMA2P24043 3122 aaKnown RBP9.88□□□□□ -0.83
PDS5A-201ENST00000303538 PANO1I0J062 215 aa9.87□□□□□ -0.83
PDS5A-201ENST00000303538 SPRR1BP22528 89 aa9.87□□□□□ -0.83
PDS5A-201ENST00000303538 KRTAP26-1Q6PEX3 210 aa9.87□□□□□ -0.83
PDS5A-201ENST00000303538 ROMO1P60602 79 aa9.86□□□□□ -0.83
PDS5A-201ENST00000303538 FP248Q71RG6 208 aaPredicted RBP9.86□□□□□ -0.83
PDS5A-201ENST00000303538 PRUNE2Q8WUY3 3088 aa9.86□□□□□ -0.83
PDS5A-201ENST00000303538 BAHCC1Q9P281 2608 aa9.86□□□□□ -0.83
PDS5A-201ENST00000303538 A0A087X002 238 aa9.84□□□□□ -0.83
PDS5A-201ENST00000303538 CHD7Q9P2D1 2997 aa9.82□□□□□ -0.84
PDS5A-201ENST00000303538 Q6ZR54 194 aa9.82□□□□□ -0.84
PDS5A-201ENST00000303538 Q5VV11 94 aa9.79□□□□□ -0.84
PDS5A-201ENST00000303538 FRYQ5TBA9 3013 aa9.79□□□□□ -0.84
PDS5A-201ENST00000303538 RANBP2P49792 3224 aaKnown RBP9.77□□□□□ -0.85
PDS5A-201ENST00000303538 GCN1Q92616 2671 aaKnown RBP9.76□□□□□ -0.85
PDS5A-201ENST00000303538 CYSTM1Q9H1C7 97 aa9.75□□□□□ -0.85
PDS5A-201ENST00000303538 WDFY4Q6ZS81 3184 aa9.73□□□□□ -0.85
PDS5A-201ENST00000303538 FREM2Q5SZK8 3169 aa9.71□□□□□ -0.85
PDS5A-201ENST00000303538 MAP1AP78559 2803 aaPredicted RBP9.7□□□□□ -0.86
PDS5A-201ENST00000303538 USP34Q70CQ2 3546 aa9.68□□□□□ -0.86
PDS5A-201ENST00000303538 H3BS24 57 aa9.67□□□□□ -0.86
PDS5A-201ENST00000303538 NBEAL2Q6ZNJ1 2754 aa9.67□□□□□ -0.86
PDS5A-201ENST00000303538 C20orf166-AS1Q96NR2 134 aa9.66□□□□□ -0.86
PDS5A-201ENST00000303538 ZNF292O60281 2723 aa9.65□□□□□ -0.86
PDS5A-201ENST00000303538 UNC80Q8N2C7 3258 aa9.65□□□□□ -0.86
PDS5A-201ENST00000303538 TRIOO75962 3097 aa9.65□□□□□ -0.86
PDS5A-201ENST00000303538 A8MUU9 505 aa9.65□□□□□ -0.87
PDS5A-201ENST00000303538 COL6A3P12111 3177 aa9.64□□□□□ -0.87
PDS5A-201ENST00000303538 NOTCH2NLQ7Z3S9 236 aa9.63□□□□□ -0.87
PDS5A-201ENST00000303538 Q5XG85 94 aa9.63□□□□□ -0.87
PDS5A-201ENST00000303538 VCANP13611 3396 aa9.59□□□□□ -0.87
PDS5A-201ENST00000303538 CRYBG3Q68DQ2 2970 aa9.58□□□□□ -0.88
PDS5A-201ENST00000303538 REV3LO60673 3130 aa9.58□□□□□ -0.88
PDS5A-201ENST00000303538 ITPR2Q14571 2701 aa9.56□□□□□ -0.88
PDS5A-201ENST00000303538 A0A1B0GVY2 172 aa9.55□□□□□ -0.88
PDS5A-201ENST00000303538 SPTBN5Q9NRC6 3674 aaKnown RBP9.53□□□□□ -0.88
PDS5A-201ENST00000303538 A8MU10 97 aa9.53□□□□□ -0.88
PDS5A-201ENST00000303538 DSPP15924 2871 aaKnown RBP9.52□□□□□ -0.88
PDS5A-201ENST00000303538 UBR5O95071 2799 aaPredicted RBP9.52□□□□□ -0.88
PDS5A-201ENST00000303538 KRTAP11-1Q8IUC1 163 aa9.52□□□□□ -0.88
PDS5A-201ENST00000303538 IGSF10Q6WRI0 2623 aa9.52□□□□□ -0.89
PDS5A-201ENST00000303538 KRTAP4-16G5E9R7 235 aaPredicted RBP9.51□□□□□ -0.89
PDS5A-201ENST00000303538 KMT2BQ9UMN6 2715 aaPredicted RBP9.5□□□□□ -0.89
PDS5A-201ENST00000303538 SPEGQ15772 3267 aa9.47□□□□□ -0.89
PDS5A-201ENST00000303538 NSD1Q96L73 2696 aaPredicted RBP9.46□□□□□ -0.89
PDS5A-201ENST00000303538 VPS13AQ96RL7 3174 aa9.42□□□□□ -0.9
PDS5A-201ENST00000303538 KRTAP29-1A8MX34 341 aaPredicted RBP9.42□□□□□ -0.9
PDS5A-201ENST00000303538 TRANK1O15050 2925 aa9.4□□□□□ -0.9
PDS5A-201ENST00000303538 DMXL2Q8TDJ6 3036 aa9.4□□□□□ -0.91
PDS5A-201ENST00000303538 Q6ZRN7 208 aaPredicted RBP9.39□□□□□ -0.91
PDS5A-201ENST00000303538 EYSQ5T1H1 3165 aa9.38□□□□□ -0.91
PDS5A-201ENST00000303538 KRTAP13-2Q52LG2 175 aa9.38□□□□□ -0.91
PDS5A-201ENST00000303538 CHD9Q3L8U1 2897 aa9.38□□□□□ -0.91
PDS5A-201ENST00000303538 RPS29P62273 56 aaKnown RBP9.34□□□□□ -0.91
PDS5A-201ENST00000303538 ASPMQ8IZT6 3477 aa9.34□□□□□ -0.91
PDS5A-201ENST00000303538 HTTP42858 3142 aa9.34□□□□□ -0.91
PDS5A-201ENST00000303538 TNP1P09430 55 aa9.33□□□□□ -0.92
PDS5A-201ENST00000303538 MYO15AQ9UKN7 3530 aa9.33□□□□□ -0.92
PDS5A-201ENST00000303538 TACC2O95359 2948 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms