RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 KRTAP10-11P60412 298 aa7.11□□□□□ -1.27
GCN1-201ENST00000300648 Q6ZSA8 131 aa7.1□□□□□ -1.27
GCN1-201ENST00000300648 ZCCHC13Q8WW36 166 aaKnown RBP7.09□□□□□ -1.27
GCN1-201ENST00000300648 MMP24-AS1A0A0U1RRL7 71 aa7.08□□□□□ -1.28
GCN1-201ENST00000300648 PRAC1Q96KF2 57 aa7.08□□□□□ -1.28
GCN1-201ENST00000300648 MAP1AP78559 2803 aaPredicted RBP7.07□□□□□ -1.28
GCN1-201ENST00000300648 SPRR1AP35321 89 aa7.06□□□□□ -1.28
GCN1-201ENST00000300648 SPINK7P58062 85 aa7.06□□□□□ -1.28
GCN1-201ENST00000300648 A0A0G2JQZ4 141 aa7.06□□□□□ -1.28
GCN1-201ENST00000300648 S4R3F8 94 aa7.05□□□□□ -1.28
GCN1-201ENST00000300648 SPRR1BP22528 89 aa7.05□□□□□ -1.28
GCN1-201ENST00000300648 ROMO1P60602 79 aa7.03□□□□□ -1.28
GCN1-201ENST00000300648 ANAPC11Q9NYG5 84 aa7.02□□□□□ -1.29
GCN1-201ENST00000300648 SEC61BP60468 96 aaKnown RBP7.02□□□□□ -1.29
GCN1-201ENST00000300648 LINC00472Q9H8W2 130 aa7.02□□□□□ -1.29
GCN1-201ENST00000300648 RPL37P61927 97 aaKnown RBP7□□□□□ -1.29
GCN1-201ENST00000300648 Q5W150 140 aa6.99□□□□□ -1.29
GCN1-201ENST00000300648 PLAC8Q9NZF1 115 aa6.99□□□□□ -1.29
GCN1-201ENST00000300648 TRANK1O15050 2925 aa6.98□□□□□ -1.29
GCN1-201ENST00000300648 IGSF10Q6WRI0 2623 aa6.98□□□□□ -1.29
GCN1-201ENST00000300648 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.97□□□□□ -1.29
GCN1-201ENST00000300648 KRTAP1-3Q8IUG1 177 aa6.96□□□□□ -1.3
GCN1-201ENST00000300648 R4GN34 69 aa6.95□□□□□ -1.3
GCN1-201ENST00000300648 UBR5O95071 2799 aaPredicted RBP6.95□□□□□ -1.3
GCN1-201ENST00000300648 Q6ZR54 194 aa6.95□□□□□ -1.3
GCN1-201ENST00000300648 KRTAP1-1Q07627 177 aa6.93□□□□□ -1.3
GCN1-201ENST00000300648 CASC10Q5T4H9 136 aa6.93□□□□□ -1.3
GCN1-201ENST00000300648 CEP350Q5VT06 3117 aa6.93□□□□□ -1.3
GCN1-201ENST00000300648 KRTAP10-3P60369 221 aa6.9□□□□□ -1.3
GCN1-201ENST00000300648 H1FX-AS1Q4G0G2 97 aa6.9□□□□□ -1.31
GCN1-201ENST00000300648 SMR3BP02814 79 aaPredicted RBP6.89□□□□□ -1.31
GCN1-201ENST00000300648 A0A087X002 238 aa6.89□□□□□ -1.31
GCN1-201ENST00000300648 CYSTM1Q9H1C7 97 aa6.88□□□□□ -1.31
GCN1-201ENST00000300648 DNAH12Q6ZR08 3092 aa6.87□□□□□ -1.31
GCN1-201ENST00000300648 SRCAPQ6ZRS2 3230 aa6.86□□□□□ -1.31
GCN1-201ENST00000300648 UTP20O75691 2785 aaKnown RBP6.85□□□□□ -1.31
GCN1-201ENST00000300648 APCP25054 2843 aa6.85□□□□□ -1.31
GCN1-201ENST00000300648 SPATA8Q6RVD6 105 aa6.83□□□□□ -1.32
GCN1-201ENST00000300648 FLNCQ14315 2725 aa6.83□□□□□ -1.32
GCN1-201ENST00000300648 M0R2T5 61 aa6.83□□□□□ -1.32
GCN1-201ENST00000300648 NBEAL2Q6ZNJ1 2754 aa6.82□□□□□ -1.32
GCN1-201ENST00000300648 DSPP15924 2871 aaKnown RBP6.82□□□□□ -1.32
GCN1-201ENST00000300648 ITPR1Q14643 2758 aa6.8□□□□□ -1.32
GCN1-201ENST00000300648 KRTAP26-1Q6PEX3 210 aa6.8□□□□□ -1.32
GCN1-201ENST00000300648 OXTP01178 125 aa6.8□□□□□ -1.32
GCN1-201ENST00000300648 NIPBLQ6KC79 2804 aaeCLIP6.79□□□□□ -1.32
GCN1-201ENST00000300648 A0A0C4DFX4 3053 aa6.78□□□□□ -1.32
GCN1-201ENST00000300648 RPS29P62273 56 aaKnown RBP6.77□□□□□ -1.33
GCN1-201ENST00000300648 KRTAP25-1Q3LHN0 102 aa6.77□□□□□ -1.33
GCN1-201ENST00000300648 A6NN06 94 aa6.76□□□□□ -1.33
GCN1-201ENST00000300648 PANO1I0J062 215 aa6.76□□□□□ -1.33
GCN1-201ENST00000300648 MGAQ8IWI9 3026 aa6.75□□□□□ -1.33
GCN1-201ENST00000300648 KRTAP29-1A8MX34 341 aaPredicted RBP6.75□□□□□ -1.33
GCN1-201ENST00000300648 M0QZ58 72 aa6.75□□□□□ -1.33
GCN1-201ENST00000300648 Q8NDZ9 215 aa6.74□□□□□ -1.33
GCN1-201ENST00000300648 HIVEP1P15822 2718 aa6.72□□□□□ -1.33
GCN1-201ENST00000300648 NDUFAF8A1L188 74 aa6.71□□□□□ -1.34
GCN1-201ENST00000300648 CHD7Q9P2D1 2997 aa6.71□□□□□ -1.34
GCN1-201ENST00000300648 LCE6AA0A183 80 aa6.7□□□□□ -1.34
GCN1-201ENST00000300648 KRTAP4-16G5E9R7 235 aaPredicted RBP6.7□□□□□ -1.34
GCN1-201ENST00000300648 PLAC4Q8WY50 150 aa6.7□□□□□ -1.34
GCN1-201ENST00000300648 CHD9Q3L8U1 2897 aa6.66□□□□□ -1.34
GCN1-201ENST00000300648 ADM2Q7Z4H4 148 aa6.63□□□□□ -1.35
GCN1-201ENST00000300648 C5orf42Q9H799 3197 aa6.63□□□□□ -1.35
GCN1-201ENST00000300648 GOLGB1Q14789 3259 aaKnown RBP6.6□□□□□ -1.35
GCN1-201ENST00000300648 CFAP54Q96N23 3096 aa6.6□□□□□ -1.35
GCN1-201ENST00000300648 Q5VSD8 79 aa6.55□□□□□ -1.36
GCN1-201ENST00000300648 C20orf166-AS1Q96NR2 134 aa6.54□□□□□ -1.36
GCN1-201ENST00000300648 TENM3Q9P273 2699 aa6.53□□□□□ -1.36
GCN1-201ENST00000300648 PP632Q6XCG6 107 aa6.53□□□□□ -1.36
GCN1-201ENST00000300648 KRTAP1-5Q9BYS1 174 aa6.52□□□□□ -1.37
GCN1-201ENST00000300648 PCNTO95613 3336 aa6.51□□□□□ -1.37
GCN1-201ENST00000300648 KRTAP21-3Q3LHN1 58 aa6.51□□□□□ -1.37
GCN1-201ENST00000300648 FRYLO94915 3013 aa6.48□□□□□ -1.37
GCN1-201ENST00000300648 KALRNO60229 2985 aa6.48□□□□□ -1.37
GCN1-201ENST00000300648 TENM1Q9UKZ4 2725 aa6.47□□□□□ -1.37
GCN1-201ENST00000300648 FRYQ5TBA9 3013 aa6.47□□□□□ -1.37
GCN1-201ENST00000300648 A8MUU9 505 aa6.47□□□□□ -1.37
GCN1-201ENST00000300648 LAMA2P24043 3122 aaKnown RBP6.46□□□□□ -1.38
GCN1-201ENST00000300648 NOTCH2NLQ7Z3S9 236 aa6.45□□□□□ -1.38
GCN1-201ENST00000300648 NF1P21359 2839 aa6.45□□□□□ -1.38
GCN1-201ENST00000300648 TENM4Q6N022 2769 aa6.44□□□□□ -1.38
GCN1-201ENST00000300648 KRTAP10-1P60331 282 aa6.44□□□□□ -1.38
GCN1-201ENST00000300648 TNP1P09430 55 aa6.42□□□□□ -1.38
GCN1-201ENST00000300648 LRBAP50851 2863 aa6.41□□□□□ -1.38
GCN1-201ENST00000300648 VPS13AQ96RL7 3174 aa6.4□□□□□ -1.38
GCN1-201ENST00000300648 KRTAP11-1Q8IUC1 163 aa6.39□□□□□ -1.39
GCN1-201ENST00000300648 CELSR2Q9HCU4 2923 aa6.38□□□□□ -1.39
GCN1-201ENST00000300648 RANBP2P49792 3224 aaKnown RBP6.37□□□□□ -1.39
GCN1-201ENST00000300648 KRTAP10-2P60368 255 aa6.36□□□□□ -1.39
GCN1-201ENST00000300648 PRUNE2Q8WUY3 3088 aa6.35□□□□□ -1.39
GCN1-201ENST00000300648 KRTAP13-1Q8IUC0 172 aa6.34□□□□□ -1.39
GCN1-201ENST00000300648 ZZEF1O43149 2961 aa6.34□□□□□ -1.39
GCN1-201ENST00000300648 WDFY4Q6ZS81 3184 aa6.34□□□□□ -1.4
GCN1-201ENST00000300648 A8MU10 97 aa6.32□□□□□ -1.4
GCN1-201ENST00000300648 Q6ZRN7 208 aaPredicted RBP6.32□□□□□ -1.4
GCN1-201ENST00000300648 C10orf95Q9H7T3 257 aa6.31□□□□□ -1.4
GCN1-201ENST00000300648 UTRNP46939 3433 aa6.28□□□□□ -1.4
GCN1-201ENST00000300648 ASH1LQ9NR48 2969 aaKnown RBP6.28□□□□□ -1.4
GCN1-201ENST00000300648 ZANQ9Y493 2812 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms