RNA–Protein interactions for RNA: ENST00000299440.5

RAG1-201, Transcript of recombination activating 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAG1, Length 6,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-201ENST00000299440 CSAG1Q6PB30 78 aa4.37□□□□□ -1.71
RAG1-201ENST00000299440 FAM104AQ969W3 186 aa4.37□□□□□ -1.71
RAG1-201ENST00000299440 BRCA2P51587 3418 aa4.37□□□□□ -1.71
RAG1-201ENST00000299440 UQCR11O14957 56 aa4.37□□□□□ -1.71
RAG1-201ENST00000299440 CHD9Q3L8U1 2897 aa4.37□□□□□ -1.71
RAG1-201ENST00000299440 KRTAP21-3Q3LHN1 58 aa4.36□□□□□ -1.71
RAG1-201ENST00000299440 S4R3F8 94 aa4.36□□□□□ -1.71
RAG1-201ENST00000299440 DMBT1Q9UGM3 2413 aaPredicted RBP4.35□□□□□ -1.71
RAG1-201ENST00000299440 PRUNE2Q8WUY3 3088 aa4.35□□□□□ -1.71
RAG1-201ENST00000299440 STAB2Q8WWQ8 2551 aa4.35□□□□□ -1.71
RAG1-201ENST00000299440 HTTP42858 3142 aa4.35□□□□□ -1.71
RAG1-201ENST00000299440 WDFY4Q6ZS81 3184 aa4.34□□□□□ -1.71
RAG1-201ENST00000299440 ZCCHC13Q8WW36 166 aaKnown RBP4.34□□□□□ -1.72
RAG1-201ENST00000299440 MIR22HGQ0VDD5 57 aa4.34□□□□□ -1.72
RAG1-201ENST00000299440 FLG2Q5D862 2391 aaPredicted RBP4.33□□□□□ -1.72
RAG1-201ENST00000299440 HRES1P13985 223 aa4.32□□□□□ -1.72
RAG1-201ENST00000299440 Q6ZR54 194 aa4.32□□□□□ -1.72
RAG1-201ENST00000299440 FRYQ5TBA9 3013 aa4.31□□□□□ -1.72
RAG1-201ENST00000299440 SPINK7P58062 85 aa4.31□□□□□ -1.72
RAG1-201ENST00000299440 R4GN34 69 aa4.31□□□□□ -1.72
RAG1-201ENST00000299440 TRANK1O15050 2925 aa4.31□□□□□ -1.72
RAG1-201ENST00000299440 UBR5O95071 2799 aaPredicted RBP4.3□□□□□ -1.72
RAG1-201ENST00000299440 A8MUN3 132 aa4.3□□□□□ -1.72
RAG1-201ENST00000299440 PANO1I0J062 215 aa4.29□□□□□ -1.72
RAG1-201ENST00000299440 CDC42SE1Q9NRR8 79 aa4.28□□□□□ -1.72
RAG1-201ENST00000299440 MAP1AP78559 2803 aaPredicted RBP4.28□□□□□ -1.73
RAG1-201ENST00000299440 CFAP54Q96N23 3096 aa4.27□□□□□ -1.73
RAG1-201ENST00000299440 FP248Q71RG6 208 aaPredicted RBP4.27□□□□□ -1.73
RAG1-201ENST00000299440 PLAC4Q8WY50 150 aa4.27□□□□□ -1.73
RAG1-201ENST00000299440 XIRP2A4UGR9 3374 aa4.27□□□□□ -1.73
RAG1-201ENST00000299440 TRIOO75962 3097 aa4.26□□□□□ -1.73
RAG1-201ENST00000299440 ITPR2Q14571 2701 aa4.26□□□□□ -1.73
RAG1-201ENST00000299440 LCA10Q71F78 164 aa4.25□□□□□ -1.73
RAG1-201ENST00000299440 NSD1Q96L73 2696 aaPredicted RBP4.25□□□□□ -1.73
RAG1-201ENST00000299440 Q8N9P0 234 aaPredicted RBP4.24□□□□□ -1.73
RAG1-201ENST00000299440 CRYBG3Q68DQ2 2970 aa4.24□□□□□ -1.73
RAG1-201ENST00000299440 LINC00483Q53H64 154 aa4.24□□□□□ -1.73
RAG1-201ENST00000299440 Q8NDZ9 215 aa4.24□□□□□ -1.73
RAG1-201ENST00000299440 TENM4Q6N022 2769 aa4.23□□□□□ -1.73
RAG1-201ENST00000299440 A0A087X002 238 aa4.23□□□□□ -1.73
RAG1-201ENST00000299440 A0A1B0GU33 70 aa4.22□□□□□ -1.73
RAG1-201ENST00000299440 M0QZ58 72 aa4.22□□□□□ -1.73
RAG1-201ENST00000299440 SPRR1AP35321 89 aa4.22□□□□□ -1.73
RAG1-201ENST00000299440 KRTAP26-1Q6PEX3 210 aa4.21□□□□□ -1.74
RAG1-201ENST00000299440 MMP24-AS1A0A0U1RRL7 71 aa4.2□□□□□ -1.74
RAG1-201ENST00000299440 Q5W150 140 aa4.2□□□□□ -1.74
RAG1-201ENST00000299440 FLNCQ14315 2725 aa4.2□□□□□ -1.74
RAG1-201ENST00000299440 CYP4F30PQ9H0H9 118 aa4.19□□□□□ -1.74
RAG1-201ENST00000299440 UNC80Q8N2C7 3258 aa4.19□□□□□ -1.74
RAG1-201ENST00000299440 TACC2O95359 2948 aa4.18□□□□□ -1.74
RAG1-201ENST00000299440 NBEAL2Q6ZNJ1 2754 aa4.18□□□□□ -1.74
RAG1-201ENST00000299440 SPRR1BP22528 89 aa4.17□□□□□ -1.74
RAG1-201ENST00000299440 ITPR1Q14643 2758 aa4.17□□□□□ -1.74
RAG1-201ENST00000299440 KLKP1Q107X0 134 aa4.17□□□□□ -1.74
RAG1-201ENST00000299440 HIVEP1P15822 2718 aa4.17□□□□□ -1.74
RAG1-201ENST00000299440 LAMA2P24043 3122 aaKnown RBP4.16□□□□□ -1.74
RAG1-201ENST00000299440 KMT2BQ9UMN6 2715 aaPredicted RBP4.16□□□□□ -1.74
RAG1-201ENST00000299440 Q6ZRN7 208 aaPredicted RBP4.15□□□□□ -1.74
RAG1-201ENST00000299440 LUZP6Q538Z0 58 aa4.15□□□□□ -1.75
RAG1-201ENST00000299440 SPANXA2-OT1Q8N9U9 137 aa4.15□□□□□ -1.75
RAG1-201ENST00000299440 ADM2Q7Z4H4 148 aa4.15□□□□□ -1.75
RAG1-201ENST00000299440 CDH23Q9H251 3354 aa4.15□□□□□ -1.75
RAG1-201ENST00000299440 C20orf166-AS1Q96NR2 134 aa4.14□□□□□ -1.75
RAG1-201ENST00000299440 VPS13AQ96RL7 3174 aa4.14□□□□□ -1.75
RAG1-201ENST00000299440 LINC00472Q9H8W2 130 aa4.14□□□□□ -1.75
RAG1-201ENST00000299440 H7BZZ5 65 aa4.13□□□□□ -1.75
RAG1-201ENST00000299440 Q1T7F1 81 aa4.12□□□□□ -1.75
RAG1-201ENST00000299440 Q5XG85 94 aa4.12□□□□□ -1.75
RAG1-201ENST00000299440 DMAC1Q96GE9 116 aa4.12□□□□□ -1.75
RAG1-201ENST00000299440 COL12A1Q99715 3063 aa4.12□□□□□ -1.75
RAG1-201ENST00000299440 SZT2Q5T011 3432 aa4.11□□□□□ -1.75
RAG1-201ENST00000299440 FRYLO94915 3013 aa4.1□□□□□ -1.75
RAG1-201ENST00000299440 OCR1Q9BZK8 76 aa4.1□□□□□ -1.75
RAG1-201ENST00000299440 ATMQ13315 3056 aa4.1□□□□□ -1.75
RAG1-201ENST00000299440 LAMA1P25391 3075 aa4.09□□□□□ -1.75
RAG1-201ENST00000299440 KRTAP11-1Q8IUC1 163 aa4.09□□□□□ -1.76
RAG1-201ENST00000299440 VCANP13611 3396 aa4.08□□□□□ -1.76
RAG1-201ENST00000299440 H1FX-AS1Q4G0G2 97 aa4.07□□□□□ -1.76
RAG1-201ENST00000299440 UTP20O75691 2785 aaKnown RBP4.07□□□□□ -1.76
RAG1-201ENST00000299440 DMXL2Q8TDJ6 3036 aa4.07□□□□□ -1.76
RAG1-201ENST00000299440 CELSR3Q9NYQ7 3312 aa4.06□□□□□ -1.76
RAG1-201ENST00000299440 COL6A3P12111 3177 aa4.06□□□□□ -1.76
RAG1-201ENST00000299440 KRTAP13-2Q52LG2 175 aa4.05□□□□□ -1.76
RAG1-201ENST00000299440 KTN1-AS1Q86SY8 53 aa4.05□□□□□ -1.76
RAG1-201ENST00000299440 A0A1B0GVY2 172 aa4.04□□□□□ -1.76
RAG1-201ENST00000299440 RPL37P61927 97 aaKnown RBP4.04□□□□□ -1.76
RAG1-201ENST00000299440 A8MUU9 505 aa4.02□□□□□ -1.77
RAG1-201ENST00000299440 RPS29P62273 56 aaKnown RBP4.02□□□□□ -1.77
RAG1-201ENST00000299440 NOTCH2NLQ7Z3S9 236 aa4.02□□□□□ -1.77
RAG1-201ENST00000299440 CYSTM1Q9H1C7 97 aa4.02□□□□□ -1.77
RAG1-201ENST00000299440 KRTAP4-16G5E9R7 235 aaPredicted RBP4.02□□□□□ -1.77
RAG1-201ENST00000299440 EYSQ5T1H1 3165 aa4.02□□□□□ -1.77
RAG1-201ENST00000299440 Q75L30 129 aa4.01□□□□□ -1.77
RAG1-201ENST00000299440 BOD1L1Q8NFC6 3051 aa4.01□□□□□ -1.77
RAG1-201ENST00000299440 SPATA8Q6RVD6 105 aa4.01□□□□□ -1.77
RAG1-201ENST00000299440 FREM2Q5SZK8 3169 aa3.99□□□□□ -1.77
RAG1-201ENST00000299440 LRBAP50851 2863 aa3.98□□□□□ -1.77
RAG1-201ENST00000299440 APCP25054 2843 aa3.98□□□□□ -1.77
RAG1-201ENST00000299440 CFAP47Q6ZTR5 3102 aa3.97□□□□□ -1.77
RAG1-201ENST00000299440 NBEAQ8NFP9 2946 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms