RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 PRR4Q16378 134 aa11.39□□□□□ -0.59
TIMP4-201ENST00000287814 FAM218AQ96MZ4 157 aa11.39□□□□□ -0.59
TIMP4-201ENST00000287814 RETNLBQ9BQ08 111 aa11.39□□□□□ -0.59
TIMP4-201ENST00000287814 LPAP08519 4548 aa11.38□□□□□ -0.59
TIMP4-201ENST00000287814 NAA38Q9BRA0 125 aaKnown RBP11.37□□□□□ -0.59
TIMP4-201ENST00000287814 H0YGX0 51 aa11.36□□□□□ -0.59
TIMP4-201ENST00000287814 TRIAP1O43715 76 aa11.36□□□□□ -0.59
TIMP4-201ENST00000287814 C9orf118A6NHY6 69 aa11.36□□□□□ -0.59
TIMP4-201ENST00000287814 SPINK1P00995 79 aa11.36□□□□□ -0.59
TIMP4-201ENST00000287814 H3BUT2 72 aa11.35□□□□□ -0.59
TIMP4-201ENST00000287814 UBR4Q5T4S7 5183 aa11.35□□□□□ -0.59
TIMP4-201ENST00000287814 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.34□□□□□ -0.59
TIMP4-201ENST00000287814 A0A0G2JQZ4 141 aa11.3□□□□□ -0.6
TIMP4-201ENST00000287814 HRCT1Q6UXD1 115 aa11.29□□□□□ -0.6
TIMP4-201ENST00000287814 CLEC2BQ92478 149 aa11.29□□□□□ -0.6
TIMP4-201ENST00000287814 PSMB2P49721 201 aa11.28□□□□□ -0.6
TIMP4-201ENST00000287814 A0A1W2PPM0 123 aa11.27□□□□□ -0.6
TIMP4-201ENST00000287814 RPS29P62273 56 aaKnown RBP11.27□□□□□ -0.6
TIMP4-201ENST00000287814 A0A1B0GX51 115 aa11.25□□□□□ -0.61
TIMP4-201ENST00000287814 SNCGO76070 127 aa11.24□□□□□ -0.61
TIMP4-201ENST00000287814 FABP2P12104 132 aa11.24□□□□□ -0.61
TIMP4-201ENST00000287814 PPDPFLQ8WWR9 84 aa11.24□□□□□ -0.61
TIMP4-201ENST00000287814 F8WEM9 126 aa11.23□□□□□ -0.61
TIMP4-201ENST00000287814 IGLV7-46A0A075B6I9 117 aa11.22□□□□□ -0.61
TIMP4-201ENST00000287814 IGLV8-61A0A075B6I0 122 aa11.21□□□□□ -0.61
TIMP4-201ENST00000287814 COX6CP09669 75 aa11.21□□□□□ -0.61
TIMP4-201ENST00000287814 OCIAD2Q56VL3 154 aa11.21□□□□□ -0.61
TIMP4-201ENST00000287814 SCGB1C2P0DMR2 95 aa11.2□□□□□ -0.62
TIMP4-201ENST00000287814 CD164Q04900 197 aa11.2□□□□□ -0.62
TIMP4-201ENST00000287814 SPCS1Q9Y6A9 102 aa11.2□□□□□ -0.62
TIMP4-201ENST00000287814 IGFL1Q6UW32 110 aa11.17□□□□□ -0.62
TIMP4-201ENST00000287814 FP248Q71RG6 208 aaPredicted RBP11.17□□□□□ -0.62
TIMP4-201ENST00000287814 LYRM7Q5U5X0 104 aa11.17□□□□□ -0.62
TIMP4-201ENST00000287814 K7EP34 96 aa11.16□□□□□ -0.62
TIMP4-201ENST00000287814 NDUFV3P56181 108 aaKnown RBP11.15□□□□□ -0.62
TIMP4-201ENST00000287814 UBE2V1Q13404 147 aa11.15□□□□□ -0.62
TIMP4-201ENST00000287814 Q6JHZ5 121 aa11.15□□□□□ -0.62
TIMP4-201ENST00000287814 GTF2H5Q6ZYL4 71 aa11.14□□□□□ -0.63
TIMP4-201ENST00000287814 LIMD2Q9BT23 127 aa11.14□□□□□ -0.63
TIMP4-201ENST00000287814 TCL1BO95988 128 aa11.14□□□□□ -0.63
TIMP4-201ENST00000287814 DNAL4O96015 105 aa11.14□□□□□ -0.63
TIMP4-201ENST00000287814 TPRXLQ17RH7 258 aa11.14□□□□□ -0.63
TIMP4-201ENST00000287814 LST1O00453 97 aa11.12□□□□□ -0.63
TIMP4-201ENST00000287814 H3BMG7 143 aa11.11□□□□□ -0.63
TIMP4-201ENST00000287814 Q5XG85 94 aa11.11□□□□□ -0.63
TIMP4-201ENST00000287814 ORMDL1Q9P0S3 153 aa11.11□□□□□ -0.63
TIMP4-201ENST00000287814 TRBV20-1A0A075B6N2 111 aa11.11□□□□□ -0.63
TIMP4-201ENST00000287814 GHRHP01286 108 aa11.1□□□□□ -0.63
TIMP4-201ENST00000287814 TRACP01848 142 aa11.1□□□□□ -0.63
TIMP4-201ENST00000287814 RNF213Q63HN8 5207 aa11.08□□□□□ -0.64
TIMP4-201ENST00000287814 KRTAP13-3Q3SY46 172 aa11.08□□□□□ -0.64
TIMP4-201ENST00000287814 ATXN8Q156A1 80 aa11.07□□□□□ -0.64
TIMP4-201ENST00000287814 TRBV7-7A0A0K0K1E9 115 aa11.06□□□□□ -0.64
TIMP4-201ENST00000287814 CDIP1Q9H305 208 aa11.06□□□□□ -0.64
TIMP4-201ENST00000287814 TMEM256-PLSCR3K7ERE1 68 aa11.05□□□□□ -0.64
TIMP4-201ENST00000287814 C1orf195Q5TG92 126 aa11.05□□□□□ -0.64
TIMP4-201ENST00000287814 H3BQ85 93 aa11.04□□□□□ -0.64
TIMP4-201ENST00000287814 A0A1B0GV72 72 aa11.03□□□□□ -0.64
TIMP4-201ENST00000287814 MTURNQ8N3F0 131 aa11.03□□□□□ -0.64
TIMP4-201ENST00000287814 C9JAW5 83 aa10.99□□□□□ -0.65
TIMP4-201ENST00000287814 Q6Q795 121 aa10.99□□□□□ -0.65
TIMP4-201ENST00000287814 BAALC-AS2P0C853 105 aa10.98□□□□□ -0.65
TIMP4-201ENST00000287814 A0A1W2PNM2 257 aa10.98□□□□□ -0.65
TIMP4-201ENST00000287814 TEN1Q86WV5 123 aa10.98□□□□□ -0.65
TIMP4-201ENST00000287814 PRO0461Q9UI25 63 aa10.98□□□□□ -0.65
TIMP4-201ENST00000287814 ASB16-AS1Q495Z4 193 aa10.97□□□□□ -0.65
TIMP4-201ENST00000287814 F8W1H4 67 aa10.96□□□□□ -0.65
TIMP4-201ENST00000287814 ANKRD29Q8N6D5 301 aa10.95□□□□□ -0.66
TIMP4-201ENST00000287814 SMCPP49901 116 aaPredicted RBP10.94□□□□□ -0.66
TIMP4-201ENST00000287814 A0A087WSZ3 146 aa10.92□□□□□ -0.66
TIMP4-201ENST00000287814 MUC2Q02817 5179 aa10.92□□□□□ -0.66
TIMP4-201ENST00000287814 C9orf92A6NGG3 77 aa10.91□□□□□ -0.66
TIMP4-201ENST00000287814 TRBV7-4A0A0J9YYF1 115 aa10.89□□□□□ -0.67
TIMP4-201ENST00000287814 XP32Q5T750 250 aa10.89□□□□□ -0.67
TIMP4-201ENST00000287814 RBM3P98179 157 aaKnown RBP10.89□□□□□ -0.67
TIMP4-201ENST00000287814 MUC17Q685J3 4493 aa10.89□□□□□ -0.67
TIMP4-201ENST00000287814 H3BT86 120 aa10.88□□□□□ -0.67
TIMP4-201ENST00000287814 CCKP06307 115 aa10.86□□□□□ -0.67
TIMP4-201ENST00000287814 ETDBQ3ZM63 59 aa10.86□□□□□ -0.67
TIMP4-201ENST00000287814 SS18L2Q9UHA2 77 aa10.86□□□□□ -0.67
TIMP4-201ENST00000287814 DSCR8Q96T75 97 aa10.84□□□□□ -0.67
TIMP4-201ENST00000287814 Q96NJ1 140 aa10.83□□□□□ -0.68
TIMP4-201ENST00000287814 K7ERU9 68 aa10.81□□□□□ -0.68
TIMP4-201ENST00000287814 VPS25Q9BRG1 176 aa10.81□□□□□ -0.68
TIMP4-201ENST00000287814 JMJD7-PLA2G4BH0Y9G9 81 aa10.79□□□□□ -0.68
TIMP4-201ENST00000287814 OBSCN-AS1Q96MR7 158 aa10.77□□□□□ -0.69
TIMP4-201ENST00000287814 Q6ZQT0 140 aa10.76□□□□□ -0.69
TIMP4-201ENST00000287814 SEC61BP60468 96 aaKnown RBP10.75□□□□□ -0.69
TIMP4-201ENST00000287814 LOC110117498A0A087WWA1 95 aa10.74□□□□□ -0.69
TIMP4-201ENST00000287814 C14orf132Q9NPU4 83 aa10.74□□□□□ -0.69
TIMP4-201ENST00000287814 KRTAP4-1Q9BYQ7 146 aa10.73□□□□□ -0.69
TIMP4-201ENST00000287814 LINC00472Q9H8W2 130 aa10.73□□□□□ -0.69
TIMP4-201ENST00000287814 DEFB116Q30KQ4 102 aa10.72□□□□□ -0.69
TIMP4-201ENST00000287814 IGKV4-1P06312 121 aa10.69□□□□□ -0.7
TIMP4-201ENST00000287814 J3QR89 54 aa10.68□□□□□ -0.7
TIMP4-201ENST00000287814 PDE6GP18545 87 aa10.68□□□□□ -0.7
TIMP4-201ENST00000287814 PCOTHQ58A44 107 aa10.68□□□□□ -0.7
TIMP4-201ENST00000287814 SIGMAR1Q99720 223 aa10.67□□□□□ -0.7
TIMP4-201ENST00000287814 RPL37P61927 97 aaKnown RBP10.66□□□□□ -0.7
TIMP4-201ENST00000287814 DSCR10P59022 87 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms