RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 Q8NDZ9 215 aa5.29□□□□□ -1.56
SCUBE3-201ENST00000274938 MTORP42345 2549 aa5.28□□□□□ -1.56
SCUBE3-201ENST00000274938 LAMA2P24043 3122 aaKnown RBP5.28□□□□□ -1.56
SCUBE3-201ENST00000274938 CHD7Q9P2D1 2997 aa5.28□□□□□ -1.56
SCUBE3-201ENST00000274938 KRTAP26-1Q6PEX3 210 aa5.27□□□□□ -1.57
SCUBE3-201ENST00000274938 RANBP2P49792 3224 aaKnown RBP5.27□□□□□ -1.57
SCUBE3-201ENST00000274938 Q6ZR54 194 aa5.27□□□□□ -1.57
SCUBE3-201ENST00000274938 FASNP49327 2511 aaKnown RBP5.27□□□□□ -1.57
SCUBE3-201ENST00000274938 PRUNE2Q8WUY3 3088 aa5.26□□□□□ -1.57
SCUBE3-201ENST00000274938 KRTAP16-1A8MUX0 517 aa5.26□□□□□ -1.57
SCUBE3-201ENST00000274938 KRTAP1-3Q8IUG1 177 aa5.25□□□□□ -1.57
SCUBE3-201ENST00000274938 KRTAP1-1Q07627 177 aa5.24□□□□□ -1.57
SCUBE3-201ENST00000274938 SPATA8Q6RVD6 105 aa5.24□□□□□ -1.57
SCUBE3-201ENST00000274938 ACANP16112 2415 aa5.24□□□□□ -1.57
SCUBE3-201ENST00000274938 SEC61BP60468 96 aaKnown RBP5.23□□□□□ -1.57
SCUBE3-201ENST00000274938 DNAH14Q0VDD8 3507 aa5.22□□□□□ -1.57
SCUBE3-201ENST00000274938 POLQO75417 2590 aa5.22□□□□□ -1.57
SCUBE3-201ENST00000274938 M0QZ58 72 aa5.21□□□□□ -1.57
SCUBE3-201ENST00000274938 UNC80Q8N2C7 3258 aa5.21□□□□□ -1.58
SCUBE3-201ENST00000274938 KRTAP29-1A8MX34 341 aaPredicted RBP5.21□□□□□ -1.58
SCUBE3-201ENST00000274938 PLAC4Q8WY50 150 aa5.19□□□□□ -1.58
SCUBE3-201ENST00000274938 FLG2Q5D862 2391 aaPredicted RBP5.19□□□□□ -1.58
SCUBE3-201ENST00000274938 A6NN06 94 aa5.18□□□□□ -1.58
SCUBE3-201ENST00000274938 SZT2Q5T011 3432 aa5.18□□□□□ -1.58
SCUBE3-201ENST00000274938 KRTAP25-1Q3LHN0 102 aa5.18□□□□□ -1.58
SCUBE3-201ENST00000274938 SPTBN5Q9NRC6 3674 aaKnown RBP5.17□□□□□ -1.58
SCUBE3-201ENST00000274938 BPTFQ12830 3046 aa5.17□□□□□ -1.58
SCUBE3-201ENST00000274938 PRRC2CQ9Y520 2896 aaKnown RBP5.14□□□□□ -1.59
SCUBE3-201ENST00000274938 ADM2Q7Z4H4 148 aa5.13□□□□□ -1.59
SCUBE3-201ENST00000274938 PANO1I0J062 215 aa5.13□□□□□ -1.59
SCUBE3-201ENST00000274938 KRTAP4-16G5E9R7 235 aaPredicted RBP5.13□□□□□ -1.59
SCUBE3-201ENST00000274938 A0A087X002 238 aa5.13□□□□□ -1.59
SCUBE3-201ENST00000274938 CHD9Q3L8U1 2897 aa5.11□□□□□ -1.59
SCUBE3-201ENST00000274938 EPG5Q9HCE0 2579 aa5.1□□□□□ -1.59
SCUBE3-201ENST00000274938 LCE6AA0A183 80 aa5.1□□□□□ -1.59
SCUBE3-201ENST00000274938 NDUFAF8A1L188 74 aa5.09□□□□□ -1.59
SCUBE3-201ENST00000274938 TRANK1O15050 2925 aa5.08□□□□□ -1.6
SCUBE3-201ENST00000274938 KRTAP1-5Q9BYS1 174 aa5.07□□□□□ -1.6
SCUBE3-201ENST00000274938 A8MU10 97 aa5.07□□□□□ -1.6
SCUBE3-201ENST00000274938 EYSQ5T1H1 3165 aa5.07□□□□□ -1.6
SCUBE3-201ENST00000274938 USP34Q70CQ2 3546 aa5.06□□□□□ -1.6
SCUBE3-201ENST00000274938 RPS29P62273 56 aaKnown RBP5.05□□□□□ -1.6
SCUBE3-201ENST00000274938 CELSR3Q9NYQ7 3312 aa5.05□□□□□ -1.6
SCUBE3-201ENST00000274938 Q5VSD8 79 aa5.05□□□□□ -1.6
SCUBE3-201ENST00000274938 A0A0C4DFX4 3053 aa5.03□□□□□ -1.6
SCUBE3-201ENST00000274938 KRTAP10-1P60331 282 aa5.03□□□□□ -1.6
SCUBE3-201ENST00000274938 C20orf166-AS1Q96NR2 134 aa5.03□□□□□ -1.6
SCUBE3-201ENST00000274938 TRIOO75962 3097 aa5.02□□□□□ -1.61
SCUBE3-201ENST00000274938 VCANP13611 3396 aa5.02□□□□□ -1.61
SCUBE3-201ENST00000274938 COL6A3P12111 3177 aa5.02□□□□□ -1.61
SCUBE3-201ENST00000274938 CFAP54Q96N23 3096 aa5.01□□□□□ -1.61
SCUBE3-201ENST00000274938 USP24Q9UPU5 2620 aa5.01□□□□□ -1.61
SCUBE3-201ENST00000274938 REV3LO60673 3130 aa5.01□□□□□ -1.61
SCUBE3-201ENST00000274938 FREM2Q5SZK8 3169 aa5□□□□□ -1.61
SCUBE3-201ENST00000274938 MYO15AQ9UKN7 3530 aa4.99□□□□□ -1.61
SCUBE3-201ENST00000274938 LAMA1P25391 3075 aa4.99□□□□□ -1.61
SCUBE3-201ENST00000274938 NOTCH2NLQ7Z3S9 236 aa4.99□□□□□ -1.61
SCUBE3-201ENST00000274938 FLNBO75369 2602 aaKnown RBP4.98□□□□□ -1.61
SCUBE3-201ENST00000274938 KRTAP10-2P60368 255 aa4.98□□□□□ -1.61
SCUBE3-201ENST00000274938 WDFY4Q6ZS81 3184 aa4.97□□□□□ -1.61
SCUBE3-201ENST00000274938 HECTD1Q9ULT8 2610 aa4.97□□□□□ -1.61
SCUBE3-201ENST00000274938 A8MUU9 505 aa4.97□□□□□ -1.61
SCUBE3-201ENST00000274938 FLNAP21333 2647 aaKnown RBP4.95□□□□□ -1.62
SCUBE3-201ENST00000274938 VPS13AQ96RL7 3174 aa4.95□□□□□ -1.62
SCUBE3-201ENST00000274938 MGAM2Q2M2H8 2515 aa4.95□□□□□ -1.62
SCUBE3-201ENST00000274938 ITPR3Q14573 2671 aa4.93□□□□□ -1.62
SCUBE3-201ENST00000274938 SPEGQ15772 3267 aa4.93□□□□□ -1.62
SCUBE3-201ENST00000274938 KRTAP11-1Q8IUC1 163 aa4.93□□□□□ -1.62
SCUBE3-201ENST00000274938 HELZ2Q9BYK8 2649 aaKnown RBP4.92□□□□□ -1.62
SCUBE3-201ENST00000274938 TNRC18O15417 2968 aaPredicted RBP4.91□□□□□ -1.62
SCUBE3-201ENST00000274938 TNP1P09430 55 aa4.91□□□□□ -1.62
SCUBE3-201ENST00000274938 PP632Q6XCG6 107 aa4.89□□□□□ -1.63
SCUBE3-201ENST00000274938 MGAQ8IWI9 3026 aa4.89□□□□□ -1.63
SCUBE3-201ENST00000274938 CFAP46Q8IYW2 2715 aa4.89□□□□□ -1.63
SCUBE3-201ENST00000274938 ATRQ13535 2644 aa4.87□□□□□ -1.63
SCUBE3-201ENST00000274938 KRTAP13-1Q8IUC0 172 aa4.86□□□□□ -1.63
SCUBE3-201ENST00000274938 C10orf95Q9H7T3 257 aa4.86□□□□□ -1.63
SCUBE3-201ENST00000274938 BAHCC1Q9P281 2608 aa4.83□□□□□ -1.64
SCUBE3-201ENST00000274938 KRTAP7-1Q8IUC3 87 aa4.83□□□□□ -1.64
SCUBE3-201ENST00000274938 KRTAP13-2Q52LG2 175 aa4.83□□□□□ -1.64
SCUBE3-201ENST00000274938 MAST4O15021 2626 aa4.82□□□□□ -1.64
SCUBE3-201ENST00000274938 Q6ZRN7 208 aaPredicted RBP4.82□□□□□ -1.64
SCUBE3-201ENST00000274938 AKAP13Q12802 2813 aa4.81□□□□□ -1.64
SCUBE3-201ENST00000274938 WDFY3Q8IZQ1 3526 aa4.79□□□□□ -1.64
SCUBE3-201ENST00000274938 DMBT1Q9UGM3 2413 aaPredicted RBP4.77□□□□□ -1.65
SCUBE3-201ENST00000274938 DMDP11532 3685 aa4.76□□□□□ -1.65
SCUBE3-201ENST00000274938 CENPEQ02224 2701 aa4.76□□□□□ -1.65
SCUBE3-201ENST00000274938 FRYLO94915 3013 aa4.75□□□□□ -1.65
SCUBE3-201ENST00000274938 P0C880 135 aa4.75□□□□□ -1.65
SCUBE3-201ENST00000274938 BOD1L1Q8NFC6 3051 aa4.75□□□□□ -1.65
SCUBE3-201ENST00000274938 ZNF292O60281 2723 aa4.73□□□□□ -1.65
SCUBE3-201ENST00000274938 ASPMQ8IZT6 3477 aa4.72□□□□□ -1.65
SCUBE3-201ENST00000274938 DSPP15924 2871 aaKnown RBP4.72□□□□□ -1.65
SCUBE3-201ENST00000274938 CHD6Q8TD26 2715 aa4.71□□□□□ -1.66
SCUBE3-201ENST00000274938 KMT2BQ9UMN6 2715 aaPredicted RBP4.71□□□□□ -1.66
SCUBE3-201ENST00000274938 TEX15Q9BXT5 2789 aa4.7□□□□□ -1.66
SCUBE3-201ENST00000274938 DMXL1Q9Y485 3027 aa4.69□□□□□ -1.66
SCUBE3-201ENST00000274938 STAB1Q9NY15 2570 aa4.69□□□□□ -1.66
SCUBE3-201ENST00000274938 FRYQ5TBA9 3013 aa4.67□□□□□ -1.66
SCUBE3-201ENST00000274938 H0YAA0 97 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms