RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 Q5VSD8 79 aa9.93□□□□□ -0.82
UBR3-201ENST00000272793 Q5VV11 94 aa9.93□□□□□ -0.82
UBR3-201ENST00000272793 ZCCHC13Q8WW36 166 aaKnown RBP9.92□□□□□ -0.82
UBR3-201ENST00000272793 RANBP2P49792 3224 aaKnown RBP9.92□□□□□ -0.82
UBR3-201ENST00000272793 KRTAP10-11P60412 298 aa9.9□□□□□ -0.82
UBR3-201ENST00000272793 CNBPP62633 177 aaKnown RBP9.89□□□□□ -0.83
UBR3-201ENST00000272793 PRR34Q9NV39 138 aa9.88□□□□□ -0.83
UBR3-201ENST00000272793 K7EIL1 84 aa9.88□□□□□ -0.83
UBR3-201ENST00000272793 Q5XG85 94 aa9.87□□□□□ -0.83
UBR3-201ENST00000272793 A0A0C4DFX4 3053 aa9.87□□□□□ -0.83
UBR3-201ENST00000272793 CASC10Q5T4H9 136 aa9.87□□□□□ -0.83
UBR3-201ENST00000272793 ADM2Q7Z4H4 148 aa9.86□□□□□ -0.83
UBR3-201ENST00000272793 Q8NDZ9 215 aa9.86□□□□□ -0.83
UBR3-201ENST00000272793 TNP2Q05952 138 aa9.84□□□□□ -0.83
UBR3-201ENST00000272793 CELSR3Q9NYQ7 3312 aa9.84□□□□□ -0.83
UBR3-201ENST00000272793 STAB2Q8WWQ8 2551 aa9.84□□□□□ -0.83
UBR3-201ENST00000272793 ATRQ13535 2644 aa9.82□□□□□ -0.84
UBR3-201ENST00000272793 SPATA8Q6RVD6 105 aa9.81□□□□□ -0.84
UBR3-201ENST00000272793 CYSTM1Q9H1C7 97 aa9.81□□□□□ -0.84
UBR3-201ENST00000272793 GIG44P09565 113 aaPredicted RBP9.8□□□□□ -0.84
UBR3-201ENST00000272793 NDUFAF8A1L188 74 aa9.79□□□□□ -0.84
UBR3-201ENST00000272793 SEC61BP60468 96 aaKnown RBP9.79□□□□□ -0.84
UBR3-201ENST00000272793 Q5W150 140 aa9.77□□□□□ -0.84
UBR3-201ENST00000272793 MAST4O15021 2626 aa9.77□□□□□ -0.85
UBR3-201ENST00000272793 CHD6Q8TD26 2715 aa9.77□□□□□ -0.85
UBR3-201ENST00000272793 HELZ2Q9BYK8 2649 aaKnown RBP9.76□□□□□ -0.85
UBR3-201ENST00000272793 DSPP15924 2871 aaKnown RBP9.7□□□□□ -0.86
UBR3-201ENST00000272793 COL6A5A8TX70 2615 aa9.69□□□□□ -0.86
UBR3-201ENST00000272793 C10orf142B7Z368 130 aa9.68□□□□□ -0.86
UBR3-201ENST00000272793 ITPR3Q14573 2671 aa9.68□□□□□ -0.86
UBR3-201ENST00000272793 C10orf95Q9H7T3 257 aa9.67□□□□□ -0.86
UBR3-201ENST00000272793 NSD1Q96L73 2696 aaPredicted RBP9.67□□□□□ -0.86
UBR3-201ENST00000272793 VPS13AQ96RL7 3174 aa9.64□□□□□ -0.87
UBR3-201ENST00000272793 MMP24-AS1A0A0U1RRL7 71 aa9.64□□□□□ -0.87
UBR3-201ENST00000272793 TRIOO75962 3097 aa9.61□□□□□ -0.87
UBR3-201ENST00000272793 KRTAP25-1Q3LHN0 102 aa9.58□□□□□ -0.88
UBR3-201ENST00000272793 KRTAP10-3P60369 221 aa9.57□□□□□ -0.88
UBR3-201ENST00000272793 UNC80Q8N2C7 3258 aa9.57□□□□□ -0.88
UBR3-201ENST00000272793 A0A096LNT2 108 aa9.57□□□□□ -0.88
UBR3-201ENST00000272793 TEX15Q9BXT5 2789 aa9.56□□□□□ -0.88
UBR3-201ENST00000272793 DNAH14Q0VDD8 3507 aa9.54□□□□□ -0.88
UBR3-201ENST00000272793 ASB16-AS1Q495Z4 193 aa9.54□□□□□ -0.88
UBR3-201ENST00000272793 TEP1Q99973 2627 aaKnown RBP9.54□□□□□ -0.88
UBR3-201ENST00000272793 OXTP01178 125 aa9.54□□□□□ -0.88
UBR3-201ENST00000272793 UNC79Q9P2D8 2635 aa9.51□□□□□ -0.89
UBR3-201ENST00000272793 MKI67P46013 3256 aaKnown RBP9.49□□□□□ -0.89
UBR3-201ENST00000272793 APCP25054 2843 aa9.48□□□□□ -0.89
UBR3-201ENST00000272793 A8MUU9 505 aa9.46□□□□□ -0.9
UBR3-201ENST00000272793 P0C880 135 aa9.46□□□□□ -0.9
UBR3-201ENST00000272793 FLNAP21333 2647 aaKnown RBP9.45□□□□□ -0.9
UBR3-201ENST00000272793 HTTP42858 3142 aa9.44□□□□□ -0.9
UBR3-201ENST00000272793 PANO1I0J062 215 aa9.44□□□□□ -0.9
UBR3-201ENST00000272793 ASH1LQ9NR48 2969 aaKnown RBP9.43□□□□□ -0.9
UBR3-201ENST00000272793 BRCA2P51587 3418 aa9.43□□□□□ -0.9
UBR3-201ENST00000272793 MGAQ8IWI9 3026 aa9.42□□□□□ -0.9
UBR3-201ENST00000272793 LINC00472Q9H8W2 130 aa9.4□□□□□ -0.9
UBR3-201ENST00000272793 A8MU10 97 aa9.39□□□□□ -0.91
UBR3-201ENST00000272793 FLNBO75369 2602 aaKnown RBP9.39□□□□□ -0.91
UBR3-201ENST00000272793 TNP1P09430 55 aa9.38□□□□□ -0.91
UBR3-201ENST00000272793 CDH23Q9H251 3354 aa9.38□□□□□ -0.91
UBR3-201ENST00000272793 SPRR1BP22528 89 aa9.38□□□□□ -0.91
UBR3-201ENST00000272793 Q6ZR54 194 aa9.37□□□□□ -0.91
UBR3-201ENST00000272793 CHD7Q9P2D1 2997 aa9.36□□□□□ -0.91
UBR3-201ENST00000272793 WDFY4Q6ZS81 3184 aa9.36□□□□□ -0.91
UBR3-201ENST00000272793 PLAC8Q9NZF1 115 aa9.36□□□□□ -0.91
UBR3-201ENST00000272793 KMT2BQ9UMN6 2715 aaPredicted RBP9.35□□□□□ -0.91
UBR3-201ENST00000272793 KALRNO60229 2985 aa9.32□□□□□ -0.92
UBR3-201ENST00000272793 FRYQ5TBA9 3013 aa9.32□□□□□ -0.92
UBR3-201ENST00000272793 ITPR2Q14571 2701 aa9.3□□□□□ -0.92
UBR3-201ENST00000272793 KRTAP26-1Q6PEX3 210 aa9.3□□□□□ -0.92
UBR3-201ENST00000272793 IGSF10Q6WRI0 2623 aa9.29□□□□□ -0.92
UBR3-201ENST00000272793 UTP20O75691 2785 aaKnown RBP9.27□□□□□ -0.92
UBR3-201ENST00000272793 GCN1Q92616 2671 aaKnown RBP9.26□□□□□ -0.93
UBR3-201ENST00000272793 LAMA3Q16787 3333 aa9.25□□□□□ -0.93
UBR3-201ENST00000272793 CHD9Q3L8U1 2897 aa9.25□□□□□ -0.93
UBR3-201ENST00000272793 TRANK1O15050 2925 aa9.25□□□□□ -0.93
UBR3-201ENST00000272793 COL12A1Q99715 3063 aa9.23□□□□□ -0.93
UBR3-201ENST00000272793 CRYBG3Q68DQ2 2970 aa9.21□□□□□ -0.94
UBR3-201ENST00000272793 SPEGQ15772 3267 aa9.19□□□□□ -0.94
UBR3-201ENST00000272793 SPRR1AP35321 89 aa9.18□□□□□ -0.94
UBR3-201ENST00000272793 A6NN06 94 aa9.18□□□□□ -0.94
UBR3-201ENST00000272793 MAP1AP78559 2803 aaPredicted RBP9.16□□□□□ -0.94
UBR3-201ENST00000272793 LRBAP50851 2863 aa9.14□□□□□ -0.95
UBR3-201ENST00000272793 PRUNE2Q8WUY3 3088 aa9.14□□□□□ -0.95
UBR3-201ENST00000272793 LAMA1P25391 3075 aa9.13□□□□□ -0.95
UBR3-201ENST00000272793 SETXQ7Z333 2677 aaKnown RBP9.13□□□□□ -0.95
UBR3-201ENST00000272793 UBR5O95071 2799 aaPredicted RBP9.12□□□□□ -0.95
UBR3-201ENST00000272793 FRYLO94915 3013 aa9.11□□□□□ -0.95
UBR3-201ENST00000272793 KRTAP10-8P60410 259 aa9.11□□□□□ -0.95
UBR3-201ENST00000272793 COL6A3P12111 3177 aa9.09□□□□□ -0.95
UBR3-201ENST00000272793 NBEAL2Q6ZNJ1 2754 aa9.08□□□□□ -0.96
UBR3-201ENST00000272793 ATMQ13315 3056 aa9.06□□□□□ -0.96
UBR3-201ENST00000272793 CFAP47Q6ZTR5 3102 aa9.05□□□□□ -0.96
UBR3-201ENST00000272793 BOD1L1Q8NFC6 3051 aa9.04□□□□□ -0.96
UBR3-201ENST00000272793 PP632Q6XCG6 107 aa9.04□□□□□ -0.96
UBR3-201ENST00000272793 ITPR1Q14643 2758 aa9.03□□□□□ -0.96
UBR3-201ENST00000272793 KRTAP10-1P60331 282 aa9.03□□□□□ -0.96
UBR3-201ENST00000272793 A0A087X002 238 aa9.01□□□□□ -0.97
UBR3-201ENST00000272793 NOTCH2NLQ7Z3S9 236 aa9.01□□□□□ -0.97
UBR3-201ENST00000272793 SZT2Q5T011 3432 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms