RNA–Protein interactions for RNA: ENST00000269217.10

LAMA3-201, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best) BASIC

Gene LAMA3, Length 5,671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-201ENST00000269217 Q75L30 129 aa6.32□□□□□ -1.4
LAMA3-201ENST00000269217 VPS13AQ96RL7 3174 aa6.31□□□□□ -1.4
LAMA3-201ENST00000269217 PLAC8Q9NZF1 115 aa6.31□□□□□ -1.4
LAMA3-201ENST00000269217 SPRR1BP22528 89 aa6.3□□□□□ -1.4
LAMA3-201ENST00000269217 LINC01554Q52M75 96 aa6.29□□□□□ -1.4
LAMA3-201ENST00000269217 LINC01558Q9Y6Z2 57 aa6.29□□□□□ -1.4
LAMA3-201ENST00000269217 ZNF292O60281 2723 aa6.29□□□□□ -1.4
LAMA3-201ENST00000269217 Q5XG85 94 aa6.28□□□□□ -1.4
LAMA3-201ENST00000269217 Q8N9P0 234 aaPredicted RBP6.28□□□□□ -1.4
LAMA3-201ENST00000269217 CYSTM1Q9H1C7 97 aa6.28□□□□□ -1.4
LAMA3-201ENST00000269217 A0A1B0GU33 70 aa6.27□□□□□ -1.41
LAMA3-201ENST00000269217 LINC00472Q9H8W2 130 aa6.27□□□□□ -1.41
LAMA3-201ENST00000269217 CFAP46Q8IYW2 2715 aa6.26□□□□□ -1.41
LAMA3-201ENST00000269217 FP248Q71RG6 208 aaPredicted RBP6.25□□□□□ -1.41
LAMA3-201ENST00000269217 ZCCHC13Q8WW36 166 aaKnown RBP6.25□□□□□ -1.41
LAMA3-201ENST00000269217 DSPP15924 2871 aaKnown RBP6.25□□□□□ -1.41
LAMA3-201ENST00000269217 Q6ZSA8 131 aa6.25□□□□□ -1.41
LAMA3-201ENST00000269217 KRTAP26-1Q6PEX3 210 aa6.23□□□□□ -1.41
LAMA3-201ENST00000269217 HELZ2Q9BYK8 2649 aaKnown RBP6.23□□□□□ -1.41
LAMA3-201ENST00000269217 Q5W150 140 aa6.21□□□□□ -1.41
LAMA3-201ENST00000269217 SZT2Q5T011 3432 aa6.2□□□□□ -1.42
LAMA3-201ENST00000269217 Q5VV11 94 aa6.19□□□□□ -1.42
LAMA3-201ENST00000269217 KRTAP1-5Q9BYS1 174 aa6.19□□□□□ -1.42
LAMA3-201ENST00000269217 AKAP13Q12802 2813 aa6.18□□□□□ -1.42
LAMA3-201ENST00000269217 TEP1Q99973 2627 aaKnown RBP6.18□□□□□ -1.42
LAMA3-201ENST00000269217 DMAC1Q96GE9 116 aa6.17□□□□□ -1.42
LAMA3-201ENST00000269217 LUZP6Q538Z0 58 aa6.16□□□□□ -1.42
LAMA3-201ENST00000269217 LAMA1P25391 3075 aa6.15□□□□□ -1.42
LAMA3-201ENST00000269217 VCANP13611 3396 aa6.15□□□□□ -1.43
LAMA3-201ENST00000269217 CELSR3Q9NYQ7 3312 aa6.15□□□□□ -1.43
LAMA3-201ENST00000269217 CAMK2N1Q7Z7J9 78 aa6.14□□□□□ -1.43
LAMA3-201ENST00000269217 S4R3F8 94 aa6.13□□□□□ -1.43
LAMA3-201ENST00000269217 CSAG1Q6PB30 78 aa6.13□□□□□ -1.43
LAMA3-201ENST00000269217 SETXQ7Z333 2677 aaKnown RBP6.13□□□□□ -1.43
LAMA3-201ENST00000269217 SPINK7P58062 85 aa6.12□□□□□ -1.43
LAMA3-201ENST00000269217 LINC00483Q53H64 154 aa6.12□□□□□ -1.43
LAMA3-201ENST00000269217 KRTAP4-16G5E9R7 235 aaPredicted RBP6.12□□□□□ -1.43
LAMA3-201ENST00000269217 OXTP01178 125 aa6.11□□□□□ -1.43
LAMA3-201ENST00000269217 PRAC1Q96KF2 57 aa6.09□□□□□ -1.43
LAMA3-201ENST00000269217 CHD6Q8TD26 2715 aa6.09□□□□□ -1.43
LAMA3-201ENST00000269217 COL6A3P12111 3177 aa6.08□□□□□ -1.44
LAMA3-201ENST00000269217 Q6ZR54 194 aa6.08□□□□□ -1.44
LAMA3-201ENST00000269217 KRTAP29-1A8MX34 341 aaPredicted RBP6.06□□□□□ -1.44
LAMA3-201ENST00000269217 FREM2Q5SZK8 3169 aa6.06□□□□□ -1.44
LAMA3-201ENST00000269217 FRYQ5TBA9 3013 aa6.06□□□□□ -1.44
LAMA3-201ENST00000269217 FRYLO94915 3013 aa6.06□□□□□ -1.44
LAMA3-201ENST00000269217 STAB1Q9NY15 2570 aa6.05□□□□□ -1.44
LAMA3-201ENST00000269217 KRTAP10-1P60331 282 aa6.05□□□□□ -1.44
LAMA3-201ENST00000269217 DNAH14Q0VDD8 3507 aa6.03□□□□□ -1.44
LAMA3-201ENST00000269217 KRTAP10-2P60368 255 aa6.03□□□□□ -1.44
LAMA3-201ENST00000269217 NBEAQ8NFP9 2946 aa6.02□□□□□ -1.45
LAMA3-201ENST00000269217 TEX15Q9BXT5 2789 aa6.02□□□□□ -1.45
LAMA3-201ENST00000269217 PANO1I0J062 215 aa6.02□□□□□ -1.45
LAMA3-201ENST00000269217 BOD1L1Q8NFC6 3051 aa6.02□□□□□ -1.45
LAMA3-201ENST00000269217 M0R2T5 61 aa6.01□□□□□ -1.45
LAMA3-201ENST00000269217 GCN1Q92616 2671 aaKnown RBP6.01□□□□□ -1.45
LAMA3-201ENST00000269217 R4GN34 69 aa6.01□□□□□ -1.45
LAMA3-201ENST00000269217 NBEAL1Q6ZS30 2694 aa6.01□□□□□ -1.45
LAMA3-201ENST00000269217 FLNCQ14315 2725 aa6.01□□□□□ -1.45
LAMA3-201ENST00000269217 RPL37P61927 97 aaKnown RBP6□□□□□ -1.45
LAMA3-201ENST00000269217 UNC79Q9P2D8 2635 aa5.99□□□□□ -1.45
LAMA3-201ENST00000269217 SEC61BP60468 96 aaKnown RBP5.99□□□□□ -1.45
LAMA3-201ENST00000269217 SPEGQ15772 3267 aa5.99□□□□□ -1.45
LAMA3-201ENST00000269217 H1FX-AS1Q4G0G2 97 aa5.99□□□□□ -1.45
LAMA3-201ENST00000269217 Q5VSD8 79 aa5.99□□□□□ -1.45
LAMA3-201ENST00000269217 COL6A5A8TX70 2615 aa5.98□□□□□ -1.45
LAMA3-201ENST00000269217 LCE6AA0A183 80 aa5.98□□□□□ -1.45
LAMA3-201ENST00000269217 IGSF10Q6WRI0 2623 aa5.97□□□□□ -1.45
LAMA3-201ENST00000269217 NOTCH1P46531 2555 aa5.97□□□□□ -1.45
LAMA3-201ENST00000269217 ATMQ13315 3056 aa5.97□□□□□ -1.45
LAMA3-201ENST00000269217 REV3LO60673 3130 aa5.97□□□□□ -1.45
LAMA3-201ENST00000269217 ROMO1P60602 79 aa5.97□□□□□ -1.45
LAMA3-201ENST00000269217 EYSQ5T1H1 3165 aa5.96□□□□□ -1.45
LAMA3-201ENST00000269217 TACC2O95359 2948 aa5.96□□□□□ -1.46
LAMA3-201ENST00000269217 UBR5O95071 2799 aaPredicted RBP5.95□□□□□ -1.46
LAMA3-201ENST00000269217 ZZEF1O43149 2961 aa5.95□□□□□ -1.46
LAMA3-201ENST00000269217 ASB16-AS1Q495Z4 193 aa5.95□□□□□ -1.46
LAMA3-201ENST00000269217 ADGRG4Q8IZF6 3080 aa5.95□□□□□ -1.46
LAMA3-201ENST00000269217 DMXL2Q8TDJ6 3036 aa5.94□□□□□ -1.46
LAMA3-201ENST00000269217 COL12A1Q99715 3063 aa5.94□□□□□ -1.46
LAMA3-201ENST00000269217 A0A087X002 238 aa5.94□□□□□ -1.46
LAMA3-201ENST00000269217 CFAP47Q6ZTR5 3102 aa5.91□□□□□ -1.46
LAMA3-201ENST00000269217 NOTCH2NLQ7Z3S9 236 aa5.91□□□□□ -1.46
LAMA3-201ENST00000269217 H3BS24 57 aa5.9□□□□□ -1.47
LAMA3-201ENST00000269217 KRTAP11-1Q8IUC1 163 aa5.9□□□□□ -1.47
LAMA3-201ENST00000269217 M0QZ58 72 aa5.9□□□□□ -1.47
LAMA3-201ENST00000269217 FLG2Q5D862 2391 aaPredicted RBP5.89□□□□□ -1.47
LAMA3-201ENST00000269217 SPATA8Q6RVD6 105 aa5.88□□□□□ -1.47
LAMA3-201ENST00000269217 KRTAP7-1Q8IUC3 87 aa5.88□□□□□ -1.47
LAMA3-201ENST00000269217 NBEAL2Q6ZNJ1 2754 aa5.88□□□□□ -1.47
LAMA3-201ENST00000269217 Q6ZRN7 208 aaPredicted RBP5.88□□□□□ -1.47
LAMA3-201ENST00000269217 A0A0A0MQY5 61 aa5.87□□□□□ -1.47
LAMA3-201ENST00000269217 RPS29P62273 56 aaKnown RBP5.87□□□□□ -1.47
LAMA3-201ENST00000269217 BAHCC1Q9P281 2608 aa5.87□□□□□ -1.47
LAMA3-201ENST00000269217 KALRNO60229 2985 aa5.86□□□□□ -1.47
LAMA3-201ENST00000269217 ADM2Q7Z4H4 148 aa5.85□□□□□ -1.47
LAMA3-201ENST00000269217 DMBT1Q9UGM3 2413 aaPredicted RBP5.85□□□□□ -1.47
LAMA3-201ENST00000269217 ITPR1Q14643 2758 aa5.85□□□□□ -1.47
LAMA3-201ENST00000269217 KRTAP13-1Q8IUC0 172 aa5.83□□□□□ -1.48
LAMA3-201ENST00000269217 NSD1Q96L73 2696 aaPredicted RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms