RNA–Protein interactions for RNA: ENST00000263665.6

CNTN3-201, Transcript of contactin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTN3, Length 4,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3-201ENST00000263665 PP632Q6XCG6 107 aa3.93□□□□□ -1.78
CNTN3-201ENST00000263665 PKD1L2Q7Z442 2459 aa3.92□□□□□ -1.78
CNTN3-201ENST00000263665 H0YAA0 97 aa3.92□□□□□ -1.78
CNTN3-201ENST00000263665 CEP295Q9C0D2 2601 aa3.9□□□□□ -1.78
CNTN3-201ENST00000263665 M0QZ58 72 aa3.88□□□□□ -1.79
CNTN3-201ENST00000263665 SPTBN4Q9H254 2564 aa3.86□□□□□ -1.79
CNTN3-201ENST00000263665 SETD2Q9BYW2 2564 aaPredicted RBP3.85□□□□□ -1.79
CNTN3-201ENST00000263665 ANKRD17O75179 2603 aaKnown RBP3.85□□□□□ -1.79
CNTN3-201ENST00000263665 KRTAP10-11P60412 298 aa3.84□□□□□ -1.79
CNTN3-201ENST00000263665 KRTAP13-1Q8IUC0 172 aa3.84□□□□□ -1.79
CNTN3-201ENST00000263665 KRTAP15-1Q3LI76 137 aa3.84□□□□□ -1.79
CNTN3-201ENST00000263665 C9orf92A6NGG3 77 aa3.84□□□□□ -1.79
CNTN3-201ENST00000263665 RPS29P62273 56 aaKnown RBP3.83□□□□□ -1.8
CNTN3-201ENST00000263665 POLQO75417 2590 aa3.83□□□□□ -1.8
CNTN3-201ENST00000263665 C10orf95Q9H7T3 257 aa3.82□□□□□ -1.8
CNTN3-201ENST00000263665 KRTAP7-1Q8IUC3 87 aa3.81□□□□□ -1.8
CNTN3-201ENST00000263665 EPG5Q9HCE0 2579 aa3.81□□□□□ -1.8
CNTN3-201ENST00000263665 R4GN34 69 aa3.81□□□□□ -1.8
CNTN3-201ENST00000263665 KRTAP10-3P60369 221 aa3.8□□□□□ -1.8
CNTN3-201ENST00000263665 ACANP16112 2415 aa3.79□□□□□ -1.8
CNTN3-201ENST00000263665 INE1O15225 51 aa3.79□□□□□ -1.8
CNTN3-201ENST00000263665 KRTAP13-3Q3SY46 172 aa3.78□□□□□ -1.8
CNTN3-201ENST00000263665 PRO2289Q9P1D8 64 aa3.78□□□□□ -1.8
CNTN3-201ENST00000263665 FLNBO75369 2602 aaKnown RBP3.77□□□□□ -1.81
CNTN3-201ENST00000263665 KRTAP1-3Q8IUG1 177 aa3.76□□□□□ -1.81
CNTN3-201ENST00000263665 KRTAP1-1Q07627 177 aa3.76□□□□□ -1.81
CNTN3-201ENST00000263665 SMR3BP02814 79 aaPredicted RBP3.75□□□□□ -1.81
CNTN3-201ENST00000263665 SRCAPQ6ZRS2 3230 aa3.75□□□□□ -1.81
CNTN3-201ENST00000263665 TPRXLQ17RH7 258 aa3.73□□□□□ -1.81
CNTN3-201ENST00000263665 A0A0C4DFX4 3053 aa3.73□□□□□ -1.81
CNTN3-201ENST00000263665 EP400Q96L91 3159 aa3.71□□□□□ -1.82
CNTN3-201ENST00000263665 MGAM2Q2M2H8 2515 aa3.71□□□□□ -1.82
CNTN3-201ENST00000263665 KRTAP23-1A1A580 65 aa3.7□□□□□ -1.82
CNTN3-201ENST00000263665 M0R2T5 61 aa3.7□□□□□ -1.82
CNTN3-201ENST00000263665 HECTD1Q9ULT8 2610 aa3.67□□□□□ -1.82
CNTN3-201ENST00000263665 USP24Q9UPU5 2620 aa3.65□□□□□ -1.83
CNTN3-201ENST00000263665 TNP1P09430 55 aa3.65□□□□□ -1.83
CNTN3-201ENST00000263665 KRTAP1-5Q9BYS1 174 aa3.65□□□□□ -1.83
CNTN3-201ENST00000263665 KRTAP21-3Q3LHN1 58 aa3.64□□□□□ -1.83
CNTN3-201ENST00000263665 MAST4O15021 2626 aa3.63□□□□□ -1.83
CNTN3-201ENST00000263665 HELZ2Q9BYK8 2649 aaKnown RBP3.63□□□□□ -1.83
CNTN3-201ENST00000263665 Q6ZRN7 208 aaPredicted RBP3.62□□□□□ -1.83
CNTN3-201ENST00000263665 STAB1Q9NY15 2570 aa3.61□□□□□ -1.83
CNTN3-201ENST00000263665 Q5VSD8 79 aa3.61□□□□□ -1.83
CNTN3-201ENST00000263665 FLG2Q5D862 2391 aaPredicted RBP3.6□□□□□ -1.83
CNTN3-201ENST00000263665 KRTAP10-8P60410 259 aa3.59□□□□□ -1.84
CNTN3-201ENST00000263665 KMT2BQ9UMN6 2715 aaPredicted RBP3.58□□□□□ -1.84
CNTN3-201ENST00000263665 CENPFP49454 3210 aa3.57□□□□□ -1.84
CNTN3-201ENST00000263665 DNAH12Q6ZR08 3092 aa3.57□□□□□ -1.84
CNTN3-201ENST00000263665 ATRQ13535 2644 aa3.56□□□□□ -1.84
CNTN3-201ENST00000263665 FLNAP21333 2647 aaKnown RBP3.55□□□□□ -1.84
CNTN3-201ENST00000263665 KRTAP13-2Q52LG2 175 aa3.55□□□□□ -1.84
CNTN3-201ENST00000263665 TRANK1O15050 2925 aa3.54□□□□□ -1.84
CNTN3-201ENST00000263665 UNC79Q9P2D8 2635 aa3.54□□□□□ -1.84
CNTN3-201ENST00000263665 XP32Q5T750 250 aa3.53□□□□□ -1.84
CNTN3-201ENST00000263665 ITPR3Q14573 2671 aa3.52□□□□□ -1.85
CNTN3-201ENST00000263665 CHD9Q3L8U1 2897 aa3.52□□□□□ -1.85
CNTN3-201ENST00000263665 PRRC2CQ9Y520 2896 aaKnown RBP3.51□□□□□ -1.85
CNTN3-201ENST00000263665 KRTAP10-1P60331 282 aa3.5□□□□□ -1.85
CNTN3-201ENST00000263665 KRTAP12-2P59991 146 aa3.5□□□□□ -1.85
CNTN3-201ENST00000263665 CHD7Q9P2D1 2997 aa3.5□□□□□ -1.85
CNTN3-201ENST00000263665 KRTAP13-4Q3LI77 160 aa3.49□□□□□ -1.85
CNTN3-201ENST00000263665 CENPEQ02224 2701 aa3.49□□□□□ -1.85
CNTN3-201ENST00000263665 CEP350Q5VT06 3117 aa3.49□□□□□ -1.85
CNTN3-201ENST00000263665 KRTAP12-1P59990 96 aa3.47□□□□□ -1.85
CNTN3-201ENST00000263665 UTRNP46939 3433 aa3.46□□□□□ -1.86
CNTN3-201ENST00000263665 CFAP46Q8IYW2 2715 aa3.45□□□□□ -1.86
CNTN3-201ENST00000263665 KRTAP10-2P60368 255 aa3.45□□□□□ -1.86
CNTN3-201ENST00000263665 SETXQ7Z333 2677 aaKnown RBP3.44□□□□□ -1.86
CNTN3-201ENST00000263665 GCN1Q92616 2671 aaKnown RBP3.43□□□□□ -1.86
CNTN3-201ENST00000263665 ITPR1Q14643 2758 aa3.42□□□□□ -1.86
CNTN3-201ENST00000263665 MAP1AP78559 2803 aaPredicted RBP3.42□□□□□ -1.86
CNTN3-201ENST00000263665 TEP1Q99973 2627 aaKnown RBP3.42□□□□□ -1.86
CNTN3-201ENST00000263665 CHD6Q8TD26 2715 aa3.41□□□□□ -1.86
CNTN3-201ENST00000263665 KRTAP1-4P0C5Y4 121 aa3.41□□□□□ -1.86
CNTN3-201ENST00000263665 BAHCC1Q9P281 2608 aa3.4□□□□□ -1.87
CNTN3-201ENST00000263665 USP34Q70CQ2 3546 aa3.4□□□□□ -1.87
CNTN3-201ENST00000263665 COL6A5A8TX70 2615 aa3.38□□□□□ -1.87
CNTN3-201ENST00000263665 GOLGB1Q14789 3259 aaKnown RBP3.37□□□□□ -1.87
CNTN3-201ENST00000263665 DMBT1Q9UGM3 2413 aaPredicted RBP3.36□□□□□ -1.87
CNTN3-201ENST00000263665 ZZEF1O43149 2961 aa3.36□□□□□ -1.87
CNTN3-201ENST00000263665 NBEAL1Q6ZS30 2694 aa3.36□□□□□ -1.87
CNTN3-201ENST00000263665 KRTAP10-6P60371 365 aaPredicted RBP3.36□□□□□ -1.87
CNTN3-201ENST00000263665 HTTP42858 3142 aa3.35□□□□□ -1.87
CNTN3-201ENST00000263665 KRTAP3-1Q9BYR8 98 aa3.34□□□□□ -1.88
CNTN3-201ENST00000263665 PCNTO95613 3336 aa3.33□□□□□ -1.88
CNTN3-201ENST00000263665 TEX15Q9BXT5 2789 aa3.32□□□□□ -1.88
CNTN3-201ENST00000263665 NBEAQ8NFP9 2946 aa3.31□□□□□ -1.88
CNTN3-201ENST00000263665 NSD1Q96L73 2696 aaPredicted RBP3.3□□□□□ -1.88
CNTN3-201ENST00000263665 C5orf42Q9H799 3197 aa3.3□□□□□ -1.88
CNTN3-201ENST00000263665 CFAP54Q96N23 3096 aa3.29□□□□□ -1.88
CNTN3-201ENST00000263665 NOTCH1P46531 2555 aa3.28□□□□□ -1.88
CNTN3-201ENST00000263665 TNRC18O15417 2968 aaPredicted RBP3.28□□□□□ -1.88
CNTN3-201ENST00000263665 FRYQ5TBA9 3013 aa3.27□□□□□ -1.89
CNTN3-201ENST00000263665 ZFHX3Q15911 3703 aa3.27□□□□□ -1.89
CNTN3-201ENST00000263665 STAB2Q8WWQ8 2551 aa3.27□□□□□ -1.89
CNTN3-201ENST00000263665 NBEAL2Q6ZNJ1 2754 aa3.27□□□□□ -1.89
CNTN3-201ENST00000263665 DSPP15924 2871 aaKnown RBP3.26□□□□□ -1.89
CNTN3-201ENST00000263665 AKAP13Q12802 2813 aa3.24□□□□□ -1.89
CNTN3-201ENST00000263665 KRTAP3-2Q9BYR7 98 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 148.4 ms