RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 A0A096LNT2 108 aa11.21□□□□□ -0.61
NOTCH3-201ENST00000263388 APCP25054 2843 aa11.21□□□□□ -0.62
NOTCH3-201ENST00000263388 A0A1W2PNM2 257 aa11.2□□□□□ -0.62
NOTCH3-201ENST00000263388 OCR1Q9BZK8 76 aa11.2□□□□□ -0.62
NOTCH3-201ENST00000263388 ANAPC11Q9NYG5 84 aa11.2□□□□□ -0.62
NOTCH3-201ENST00000263388 RANBP2P49792 3224 aaKnown RBP11.2□□□□□ -0.62
NOTCH3-201ENST00000263388 LAMA3Q16787 3333 aa11.19□□□□□ -0.62
NOTCH3-201ENST00000263388 A0A1B0GU33 70 aa11.17□□□□□ -0.62
NOTCH3-201ENST00000263388 CAMK2N1Q7Z7J9 78 aa11.16□□□□□ -0.62
NOTCH3-201ENST00000263388 WDFY4Q6ZS81 3184 aa11.15□□□□□ -0.62
NOTCH3-201ENST00000263388 ZNF575Q86XF7 245 aa11.15□□□□□ -0.62
NOTCH3-201ENST00000263388 DMAC1Q96GE9 116 aa11.13□□□□□ -0.63
NOTCH3-201ENST00000263388 KRTAP10-3P60369 221 aa11.12□□□□□ -0.63
NOTCH3-201ENST00000263388 BRCA2P51587 3418 aa11.12□□□□□ -0.63
NOTCH3-201ENST00000263388 FREM2Q5SZK8 3169 aa11.12□□□□□ -0.63
NOTCH3-201ENST00000263388 REV3LO60673 3130 aa11.11□□□□□ -0.63
NOTCH3-201ENST00000263388 SETXQ7Z333 2677 aaKnown RBP11.1□□□□□ -0.63
NOTCH3-201ENST00000263388 NBEAL2Q6ZNJ1 2754 aa11.1□□□□□ -0.63
NOTCH3-201ENST00000263388 IGLV7-46A0A075B6I9 117 aa11.1□□□□□ -0.63
NOTCH3-201ENST00000263388 H3BS24 57 aa11.1□□□□□ -0.63
NOTCH3-201ENST00000263388 SMR3BP02814 79 aaPredicted RBP11.1□□□□□ -0.63
NOTCH3-201ENST00000263388 DNAH14Q0VDD8 3507 aa11.09□□□□□ -0.63
NOTCH3-201ENST00000263388 KALRNO60229 2985 aa11.06□□□□□ -0.64
NOTCH3-201ENST00000263388 HRES1P13985 223 aa11.06□□□□□ -0.64
NOTCH3-201ENST00000263388 CASC10Q5T4H9 136 aa11.04□□□□□ -0.64
NOTCH3-201ENST00000263388 Q6ZSA8 131 aa11.02□□□□□ -0.65
NOTCH3-201ENST00000263388 CHD9Q3L8U1 2897 aa11□□□□□ -0.65
NOTCH3-201ENST00000263388 PRR26Q8N8Z3 221 aa11□□□□□ -0.65
NOTCH3-201ENST00000263388 FRYLO94915 3013 aa10.99□□□□□ -0.65
NOTCH3-201ENST00000263388 HTTP42858 3142 aa10.98□□□□□ -0.65
NOTCH3-201ENST00000263388 LAMA1P25391 3075 aa10.98□□□□□ -0.65
NOTCH3-201ENST00000263388 LRBAP50851 2863 aa10.95□□□□□ -0.66
NOTCH3-201ENST00000263388 FAM229BQ4G0N7 80 aa10.95□□□□□ -0.66
NOTCH3-201ENST00000263388 S4R3F8 94 aa10.93□□□□□ -0.66
NOTCH3-201ENST00000263388 CDH23Q9H251 3354 aa10.93□□□□□ -0.66
NOTCH3-201ENST00000263388 ITPR1Q14643 2758 aa10.93□□□□□ -0.66
NOTCH3-201ENST00000263388 UNC80Q8N2C7 3258 aa10.93□□□□□ -0.66
NOTCH3-201ENST00000263388 KRTAP1-3Q8IUG1 177 aa10.92□□□□□ -0.66
NOTCH3-201ENST00000263388 BAHCC1Q9P281 2608 aa10.91□□□□□ -0.66
NOTCH3-201ENST00000263388 LINC01558Q9Y6Z2 57 aa10.91□□□□□ -0.66
NOTCH3-201ENST00000263388 UTP20O75691 2785 aaKnown RBP10.89□□□□□ -0.67
NOTCH3-201ENST00000263388 CSAG1Q6PB30 78 aa10.88□□□□□ -0.67
NOTCH3-201ENST00000263388 M0R2T5 61 aa10.88□□□□□ -0.67
NOTCH3-201ENST00000263388 Q8N9P0 234 aaPredicted RBP10.87□□□□□ -0.67
NOTCH3-201ENST00000263388 SPINK7P58062 85 aa10.85□□□□□ -0.67
NOTCH3-201ENST00000263388 NSD1Q96L73 2696 aaPredicted RBP10.82□□□□□ -0.68
NOTCH3-201ENST00000263388 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.82□□□□□ -0.68
NOTCH3-201ENST00000263388 KRTAP1-1Q07627 177 aa10.81□□□□□ -0.68
NOTCH3-201ENST00000263388 Q5XG85 94 aa10.81□□□□□ -0.68
NOTCH3-201ENST00000263388 ZCCHC13Q8WW36 166 aaKnown RBP10.8□□□□□ -0.68
NOTCH3-201ENST00000263388 TNP2Q05952 138 aa10.8□□□□□ -0.68
NOTCH3-201ENST00000263388 MMP24-AS1A0A0U1RRL7 71 aa10.79□□□□□ -0.68
NOTCH3-201ENST00000263388 UBR5O95071 2799 aaPredicted RBP10.79□□□□□ -0.68
NOTCH3-201ENST00000263388 Q5VV11 94 aa10.79□□□□□ -0.68
NOTCH3-201ENST00000263388 TACC2O95359 2948 aa10.78□□□□□ -0.68
NOTCH3-201ENST00000263388 USP34Q70CQ2 3546 aa10.77□□□□□ -0.69
NOTCH3-201ENST00000263388 SPRR1AP35321 89 aa10.77□□□□□ -0.69
NOTCH3-201ENST00000263388 ROMO1P60602 79 aa10.77□□□□□ -0.69
NOTCH3-201ENST00000263388 R4GN34 69 aa10.77□□□□□ -0.69
NOTCH3-201ENST00000263388 PLAC8Q9NZF1 115 aa10.76□□□□□ -0.69
NOTCH3-201ENST00000263388 PRAC1Q96KF2 57 aa10.76□□□□□ -0.69
NOTCH3-201ENST00000263388 ASH1LQ9NR48 2969 aaKnown RBP10.75□□□□□ -0.69
NOTCH3-201ENST00000263388 NBEAQ8NFP9 2946 aa10.75□□□□□ -0.69
NOTCH3-201ENST00000263388 IGSF10Q6WRI0 2623 aa10.74□□□□□ -0.69
NOTCH3-201ENST00000263388 VCANP13611 3396 aa10.72□□□□□ -0.69
NOTCH3-201ENST00000263388 FP248Q71RG6 208 aaPredicted RBP10.72□□□□□ -0.69
NOTCH3-201ENST00000263388 ASB16-AS1Q495Z4 193 aa10.71□□□□□ -0.69
NOTCH3-201ENST00000263388 COL6A3P12111 3177 aa10.71□□□□□ -0.69
NOTCH3-201ENST00000263388 LINC00472Q9H8W2 130 aa10.71□□□□□ -0.69
NOTCH3-201ENST00000263388 DMXL2Q8TDJ6 3036 aa10.7□□□□□ -0.7
NOTCH3-201ENST00000263388 Q5W150 140 aa10.69□□□□□ -0.7
NOTCH3-201ENST00000263388 RPL37P61927 97 aaKnown RBP10.67□□□□□ -0.7
NOTCH3-201ENST00000263388 BOD1L1Q8NFC6 3051 aa10.64□□□□□ -0.71
NOTCH3-201ENST00000263388 SPRR1BP22528 89 aa10.64□□□□□ -0.71
NOTCH3-201ENST00000263388 CYSTM1Q9H1C7 97 aa10.64□□□□□ -0.71
NOTCH3-201ENST00000263388 Q8NDZ9 215 aa10.63□□□□□ -0.71
NOTCH3-201ENST00000263388 COL12A1Q99715 3063 aa10.63□□□□□ -0.71
NOTCH3-201ENST00000263388 H1FX-AS1Q4G0G2 97 aa10.57□□□□□ -0.72
NOTCH3-201ENST00000263388 KRTAP16-1A8MUX0 517 aa10.56□□□□□ -0.72
NOTCH3-201ENST00000263388 CRYBG3Q68DQ2 2970 aa10.56□□□□□ -0.72
NOTCH3-201ENST00000263388 FLNCQ14315 2725 aa10.55□□□□□ -0.72
NOTCH3-201ENST00000263388 SEC61BP60468 96 aaKnown RBP10.53□□□□□ -0.72
NOTCH3-201ENST00000263388 ZZEF1O43149 2961 aa10.52□□□□□ -0.72
NOTCH3-201ENST00000263388 ADGRG4Q8IZF6 3080 aa10.51□□□□□ -0.73
NOTCH3-201ENST00000263388 Q6ZR54 194 aa10.48□□□□□ -0.73
NOTCH3-201ENST00000263388 M0QZ58 72 aa10.48□□□□□ -0.73
NOTCH3-201ENST00000263388 CELSR2Q9HCU4 2923 aa10.48□□□□□ -0.73
NOTCH3-201ENST00000263388 PLAC4Q8WY50 150 aa10.47□□□□□ -0.73
NOTCH3-201ENST00000263388 KRTAP26-1Q6PEX3 210 aa10.46□□□□□ -0.73
NOTCH3-201ENST00000263388 SPEGQ15772 3267 aa10.46□□□□□ -0.73
NOTCH3-201ENST00000263388 SZT2Q5T011 3432 aa10.44□□□□□ -0.74
NOTCH3-201ENST00000263388 HIVEP1P15822 2718 aa10.44□□□□□ -0.74
NOTCH3-201ENST00000263388 CFAP47Q6ZTR5 3102 aa10.42□□□□□ -0.74
NOTCH3-201ENST00000263388 DMXL1Q9Y485 3027 aa10.41□□□□□ -0.74
NOTCH3-201ENST00000263388 KRTAP1-5Q9BYS1 174 aa10.36□□□□□ -0.75
NOTCH3-201ENST00000263388 TNRC18O15417 2968 aaPredicted RBP10.36□□□□□ -0.75
NOTCH3-201ENST00000263388 OXTP01178 125 aa10.35□□□□□ -0.75
NOTCH3-201ENST00000263388 ADM2Q7Z4H4 148 aa10.34□□□□□ -0.75
NOTCH3-201ENST00000263388 SPTBN5Q9NRC6 3674 aaKnown RBP10.34□□□□□ -0.75
NOTCH3-201ENST00000263388 Q5VSD8 79 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms