RNA–Protein interactions for RNA: ENST00000236850.4

APOA1-201, Transcript of apolipoprotein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOA1, Length 1,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1-201ENST00000236850 A0A1B0GX51 115 aa8.98□□□□□ -0.97
APOA1-201ENST00000236850 LST1O00453 97 aa8.98□□□□□ -0.97
APOA1-201ENST00000236850 FABP2P12104 132 aa8.98□□□□□ -0.97
APOA1-201ENST00000236850 RNF213Q63HN8 5207 aa8.97□□□□□ -0.97
APOA1-201ENST00000236850 C4orf48Q5BLP8 95 aa8.97□□□□□ -0.97
APOA1-201ENST00000236850 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.97□□□□□ -0.97
APOA1-201ENST00000236850 C3orf22Q8N5N4 141 aa8.97□□□□□ -0.97
APOA1-201ENST00000236850 DNAL4O96015 105 aa8.96□□□□□ -0.98
APOA1-201ENST00000236850 ATXN8Q156A1 80 aa8.96□□□□□ -0.98
APOA1-201ENST00000236850 LINC00483Q53H64 154 aa8.96□□□□□ -0.98
APOA1-201ENST00000236850 TRBV20-1A0A075B6N2 111 aa8.94□□□□□ -0.98
APOA1-201ENST00000236850 TRACP01848 142 aa8.94□□□□□ -0.98
APOA1-201ENST00000236850 LINC01547P58512 204 aaPredicted RBP8.94□□□□□ -0.98
APOA1-201ENST00000236850 SPCS1Q9Y6A9 102 aa8.94□□□□□ -0.98
APOA1-201ENST00000236850 IGLV5-48A0A075B6I7 105 aa8.93□□□□□ -0.98
APOA1-201ENST00000236850 TEX49A0A1B0GTD5 131 aa8.92□□□□□ -0.98
APOA1-201ENST00000236850 Q8N377 158 aa8.92□□□□□ -0.98
APOA1-201ENST00000236850 ORMDL1Q9P0S3 153 aa8.91□□□□□ -0.98
APOA1-201ENST00000236850 SPRR1BP22528 89 aa8.9□□□□□ -0.98
APOA1-201ENST00000236850 OCIAD2Q56VL3 154 aa8.9□□□□□ -0.98
APOA1-201ENST00000236850 SSBP3-AS1Q7Z2R9 100 aa8.9□□□□□ -0.98
APOA1-201ENST00000236850 Q8NBF4 154 aa8.9□□□□□ -0.98
APOA1-201ENST00000236850 H3BMG7 143 aa8.89□□□□□ -0.99
APOA1-201ENST00000236850 IGLV9-49A0A0B4J1Y8 123 aa8.88□□□□□ -0.99
APOA1-201ENST00000236850 C9JAW5 83 aa8.88□□□□□ -0.99
APOA1-201ENST00000236850 K7EP34 96 aa8.88□□□□□ -0.99
APOA1-201ENST00000236850 SPINK1P00995 79 aa8.88□□□□□ -0.99
APOA1-201ENST00000236850 SMIM29Q86T20 159 aa8.87□□□□□ -0.99
APOA1-201ENST00000236850 MTURNQ8N3F0 131 aa8.87□□□□□ -0.99
APOA1-201ENST00000236850 LAMTOR3Q9UHA4 124 aa8.87□□□□□ -0.99
APOA1-201ENST00000236850 BAALC-AS2P0C853 105 aa8.86□□□□□ -0.99
APOA1-201ENST00000236850 MOBPQ13875 183 aa8.86□□□□□ -0.99
APOA1-201ENST00000236850 PPDPFLQ8WWR9 84 aa8.86□□□□□ -0.99
APOA1-201ENST00000236850 GHRHP01286 108 aa8.85□□□□□ -0.99
APOA1-201ENST00000236850 C9orf153Q5TBE3 101 aa8.85□□□□□ -0.99
APOA1-201ENST00000236850 RETNLBQ9BQ08 111 aa8.85□□□□□ -0.99
APOA1-201ENST00000236850 LPAP08519 4548 aa8.84□□□□□ -0.99
APOA1-201ENST00000236850 IGLV7-46A0A075B6I9 117 aa8.84□□□□□ -0.99
APOA1-201ENST00000236850 A0A1B0GV90 55 aa8.84□□□□□ -0.99
APOA1-201ENST00000236850 GTF2H5Q6ZYL4 71 aa8.84□□□□□ -0.99
APOA1-201ENST00000236850 F8WEM9 126 aa8.83□□□□□ -1
APOA1-201ENST00000236850 H3BQ85 93 aa8.83□□□□□ -1
APOA1-201ENST00000236850 TMEM256-PLSCR3K7ERE1 68 aa8.83□□□□□ -1
APOA1-201ENST00000236850 NDUFV3P56181 108 aaKnown RBP8.83□□□□□ -1
APOA1-201ENST00000236850 RPS29P62273 56 aaKnown RBP8.83□□□□□ -1
APOA1-201ENST00000236850 FP248Q71RG6 208 aaPredicted RBP8.83□□□□□ -1
APOA1-201ENST00000236850 A0A1B0GV72 72 aa8.82□□□□□ -1
APOA1-201ENST00000236850 TPRXLQ17RH7 258 aa8.81□□□□□ -1
APOA1-201ENST00000236850 H3BT86 120 aa8.79□□□□□ -1
APOA1-201ENST00000236850 UBE2V1Q13404 147 aa8.79□□□□□ -1
APOA1-201ENST00000236850 ANKRD29Q8N6D5 301 aa8.79□□□□□ -1
APOA1-201ENST00000236850 CDIP1Q9H305 208 aa8.78□□□□□ -1
APOA1-201ENST00000236850 A0A0G2JQZ4 141 aa8.77□□□□□ -1.01
APOA1-201ENST00000236850 SMCPP49901 116 aaPredicted RBP8.76□□□□□ -1.01
APOA1-201ENST00000236850 PRO0461Q9UI25 63 aa8.76□□□□□ -1.01
APOA1-201ENST00000236850 IGLV8-61A0A075B6I0 122 aa8.74□□□□□ -1.01
APOA1-201ENST00000236850 IGFL1Q6UW32 110 aa8.73□□□□□ -1.01
APOA1-201ENST00000236850 HRCT1Q6UXD1 115 aa8.72□□□□□ -1.01
APOA1-201ENST00000236850 LIMD2Q9BT23 127 aa8.72□□□□□ -1.01
APOA1-201ENST00000236850 Q6JHZ5 121 aa8.71□□□□□ -1.02
APOA1-201ENST00000236850 F8W1H4 67 aa8.7□□□□□ -1.02
APOA1-201ENST00000236850 RBM3P98179 157 aaKnown RBP8.7□□□□□ -1.02
APOA1-201ENST00000236850 JMJD7-PLA2G4BH0Y9G9 81 aa8.69□□□□□ -1.02
APOA1-201ENST00000236850 CD164Q04900 197 aa8.69□□□□□ -1.02
APOA1-201ENST00000236850 DSCR8Q96T75 97 aa8.68□□□□□ -1.02
APOA1-201ENST00000236850 A0A0U1RQV1 116 aa8.67□□□□□ -1.02
APOA1-201ENST00000236850 C14orf132Q9NPU4 83 aa8.67□□□□□ -1.02
APOA1-201ENST00000236850 KRTAP13-3Q3SY46 172 aa8.66□□□□□ -1.02
APOA1-201ENST00000236850 OBSCN-AS1Q96MR7 158 aa8.66□□□□□ -1.02
APOA1-201ENST00000236850 TRBV7-4A0A0J9YYF1 115 aa8.65□□□□□ -1.02
APOA1-201ENST00000236850 VPS25Q9BRG1 176 aa8.65□□□□□ -1.02
APOA1-201ENST00000236850 A0A1W2PNM2 257 aa8.63□□□□□ -1.03
APOA1-201ENST00000236850 ETDBQ3ZM63 59 aa8.63□□□□□ -1.03
APOA1-201ENST00000236850 CCKP06307 115 aa8.62□□□□□ -1.03
APOA1-201ENST00000236850 Q6ZQT0 140 aa8.62□□□□□ -1.03
APOA1-201ENST00000236850 TEN1Q86WV5 123 aa8.62□□□□□ -1.03
APOA1-201ENST00000236850 KRTAP9-2Q9BYQ4 174 aa8.62□□□□□ -1.03
APOA1-201ENST00000236850 LOC110117498A0A087WWA1 95 aa8.61□□□□□ -1.03
APOA1-201ENST00000236850 TRBV7-7A0A0K0K1E9 115 aa8.6□□□□□ -1.03
APOA1-201ENST00000236850 Q5XG85 94 aa8.6□□□□□ -1.03
APOA1-201ENST00000236850 Q6Q795 121 aa8.59□□□□□ -1.03
APOA1-201ENST00000236850 PDE6GP18545 87 aa8.58□□□□□ -1.04
APOA1-201ENST00000236850 SEC61BP60468 96 aaKnown RBP8.57□□□□□ -1.04
APOA1-201ENST00000236850 A0A087WSZ3 146 aa8.56□□□□□ -1.04
APOA1-201ENST00000236850 ASB16-AS1Q495Z4 193 aa8.55□□□□□ -1.04
APOA1-201ENST00000236850 C21orf62-AS1Q17RA5 79 aa8.51□□□□□ -1.05
APOA1-201ENST00000236850 XP32Q5T750 250 aa8.51□□□□□ -1.05
APOA1-201ENST00000236850 SS18L2Q9UHA2 77 aa8.51□□□□□ -1.05
APOA1-201ENST00000236850 MUC2Q02817 5179 aa8.5□□□□□ -1.05
APOA1-201ENST00000236850 MUC17Q685J3 4493 aa8.49□□□□□ -1.05
APOA1-201ENST00000236850 C1orf195Q5TG92 126 aa8.49□□□□□ -1.05
APOA1-201ENST00000236850 KRTAP9-6A0A140TA67 174 aa8.47□□□□□ -1.05
APOA1-201ENST00000236850 A0A1B0GW54 56 aa8.46□□□□□ -1.06
APOA1-201ENST00000236850 C9orf92A6NGG3 77 aa8.44□□□□□ -1.06
APOA1-201ENST00000236850 DEFB116Q30KQ4 102 aa8.43□□□□□ -1.06
APOA1-201ENST00000236850 Q96NJ1 140 aa8.43□□□□□ -1.06
APOA1-201ENST00000236850 NREPQ16612 68 aa8.42□□□□□ -1.06
APOA1-201ENST00000236850 LINC00846Q9NV44 126 aa8.42□□□□□ -1.06
APOA1-201ENST00000236850 LINC00472Q9H8W2 130 aa8.39□□□□□ -1.07
APOA1-201ENST00000236850 IGKV4-1P06312 121 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms