RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 PPDPFLQ8WWR9 84 aa13.74□□□□□ -0.21
HOMER3-201ENST00000221222 OCIAD2Q56VL3 154 aa13.73□□□□□ -0.21
HOMER3-201ENST00000221222 C9orf153Q5TBE3 101 aa13.73□□□□□ -0.21
HOMER3-201ENST00000221222 Q8NBF4 154 aa13.73□□□□□ -0.21
HOMER3-201ENST00000221222 SCGB1C2P0DMR2 95 aa13.71□□□□□ -0.22
HOMER3-201ENST00000221222 LRP2P98164 4655 aa13.7□□□□□ -0.22
HOMER3-201ENST00000221222 SPAG11AQ6PDA7 123 aa13.69□□□□□ -0.22
HOMER3-201ENST00000221222 SNHG12Q9BXW3 62 aa13.68□□□□□ -0.22
HOMER3-201ENST00000221222 NAA38Q9BRA0 125 aaKnown RBP13.67□□□□□ -0.22
HOMER3-201ENST00000221222 LST1O00453 97 aa13.66□□□□□ -0.22
HOMER3-201ENST00000221222 DNAL4O96015 105 aa13.66□□□□□ -0.22
HOMER3-201ENST00000221222 GHRHP01286 108 aa13.66□□□□□ -0.22
HOMER3-201ENST00000221222 TRACP01848 142 aa13.64□□□□□ -0.23
HOMER3-201ENST00000221222 C4orf48Q5BLP8 95 aa13.64□□□□□ -0.23
HOMER3-201ENST00000221222 F8WEM9 126 aa13.63□□□□□ -0.23
HOMER3-201ENST00000221222 TAX1BP3O14907 124 aa13.62□□□□□ -0.23
HOMER3-201ENST00000221222 C9orf118A6NHY6 69 aa13.6□□□□□ -0.23
HOMER3-201ENST00000221222 PCP4L1A6NKN8 68 aa13.6□□□□□ -0.23
HOMER3-201ENST00000221222 H3BUT2 72 aa13.6□□□□□ -0.23
HOMER3-201ENST00000221222 SPINK1P00995 79 aa13.6□□□□□ -0.23
HOMER3-201ENST00000221222 ORMDL1Q9P0S3 153 aa13.6□□□□□ -0.23
HOMER3-201ENST00000221222 IGLV8-61A0A075B6I0 122 aa13.59□□□□□ -0.23
HOMER3-201ENST00000221222 H3BQ85 93 aa13.59□□□□□ -0.23
HOMER3-201ENST00000221222 LYRM7Q5U5X0 104 aa13.59□□□□□ -0.23
HOMER3-201ENST00000221222 TCL1BO95988 128 aa13.58□□□□□ -0.24
HOMER3-201ENST00000221222 RPS29P62273 56 aaKnown RBP13.57□□□□□ -0.24
HOMER3-201ENST00000221222 RNF213Q63HN8 5207 aa13.56□□□□□ -0.24
HOMER3-201ENST00000221222 NDUFV3P56181 108 aaKnown RBP13.56□□□□□ -0.24
HOMER3-201ENST00000221222 ATXN8Q156A1 80 aa13.56□□□□□ -0.24
HOMER3-201ENST00000221222 FABP2P12104 132 aa13.55□□□□□ -0.24
HOMER3-201ENST00000221222 COL5A1-AS1Q5SY13 56 aa13.55□□□□□ -0.24
HOMER3-201ENST00000221222 TMEM256-PLSCR3K7ERE1 68 aa13.54□□□□□ -0.24
HOMER3-201ENST00000221222 CD164Q04900 197 aa13.54□□□□□ -0.24
HOMER3-201ENST00000221222 Q6JHZ5 121 aa13.54□□□□□ -0.24
HOMER3-201ENST00000221222 TRBV20-1A0A075B6N2 111 aa13.53□□□□□ -0.24
HOMER3-201ENST00000221222 A0A1W2PPM0 123 aa13.52□□□□□ -0.25
HOMER3-201ENST00000221222 A0A0G2JQZ4 141 aa13.5□□□□□ -0.25
HOMER3-201ENST00000221222 IGFL1Q6UW32 110 aa13.49□□□□□ -0.25
HOMER3-201ENST00000221222 UBE2V1Q13404 147 aa13.48□□□□□ -0.25
HOMER3-201ENST00000221222 HRCT1Q6UXD1 115 aa13.48□□□□□ -0.25
HOMER3-201ENST00000221222 H3BMG7 143 aa13.46□□□□□ -0.25
HOMER3-201ENST00000221222 BAALC-AS2P0C853 105 aa13.45□□□□□ -0.26
HOMER3-201ENST00000221222 RETNLBQ9BQ08 111 aa13.44□□□□□ -0.26
HOMER3-201ENST00000221222 LIMD2Q9BT23 127 aa13.43□□□□□ -0.26
HOMER3-201ENST00000221222 PRR4Q16378 134 aa13.4□□□□□ -0.26
HOMER3-201ENST00000221222 Q5XG85 94 aa13.4□□□□□ -0.26
HOMER3-201ENST00000221222 ANKRD29Q8N6D5 301 aa13.39□□□□□ -0.27
HOMER3-201ENST00000221222 C9JAW5 83 aa13.37□□□□□ -0.27
HOMER3-201ENST00000221222 Q6Q795 121 aa13.36□□□□□ -0.27
HOMER3-201ENST00000221222 SPCS1Q9Y6A9 102 aa13.36□□□□□ -0.27
HOMER3-201ENST00000221222 LPAP08519 4548 aa13.36□□□□□ -0.27
HOMER3-201ENST00000221222 TRBV7-7A0A0K0K1E9 115 aa13.35□□□□□ -0.27
HOMER3-201ENST00000221222 FP248Q71RG6 208 aaPredicted RBP13.35□□□□□ -0.27
HOMER3-201ENST00000221222 A0A1B0GV72 72 aa13.33□□□□□ -0.27
HOMER3-201ENST00000221222 TEN1Q86WV5 123 aa13.32□□□□□ -0.28
HOMER3-201ENST00000221222 RBM3P98179 157 aaKnown RBP13.32□□□□□ -0.28
HOMER3-201ENST00000221222 TRBV7-4A0A0J9YYF1 115 aa13.3□□□□□ -0.28
HOMER3-201ENST00000221222 IGLV7-46A0A075B6I9 117 aa13.29□□□□□ -0.28
HOMER3-201ENST00000221222 H3BT86 120 aa13.29□□□□□ -0.28
HOMER3-201ENST00000221222 A0A1W2PNM2 257 aa13.28□□□□□ -0.28
HOMER3-201ENST00000221222 JMJD7-PLA2G4BH0Y9G9 81 aa13.27□□□□□ -0.29
HOMER3-201ENST00000221222 ASB16-AS1Q495Z4 193 aa13.27□□□□□ -0.29
HOMER3-201ENST00000221222 K7EP34 96 aa13.26□□□□□ -0.29
HOMER3-201ENST00000221222 DSCR8Q96T75 97 aa13.26□□□□□ -0.29
HOMER3-201ENST00000221222 MTURNQ8N3F0 131 aa13.24□□□□□ -0.29
HOMER3-201ENST00000221222 C1orf195Q5TG92 126 aa13.23□□□□□ -0.29
HOMER3-201ENST00000221222 OBSCN-AS1Q96MR7 158 aa13.22□□□□□ -0.29
HOMER3-201ENST00000221222 CCKP06307 115 aa13.21□□□□□ -0.29
HOMER3-201ENST00000221222 TPRXLQ17RH7 258 aa13.21□□□□□ -0.29
HOMER3-201ENST00000221222 SS18L2Q9UHA2 77 aa13.21□□□□□ -0.29
HOMER3-201ENST00000221222 A0A087WSZ3 146 aa13.2□□□□□ -0.3
HOMER3-201ENST00000221222 LOC110117498A0A087WWA1 95 aa13.18□□□□□ -0.3
HOMER3-201ENST00000221222 GTF2H5Q6ZYL4 71 aa13.18□□□□□ -0.3
HOMER3-201ENST00000221222 PDE6GP18545 87 aa13.16□□□□□ -0.3
HOMER3-201ENST00000221222 PRO0461Q9UI25 63 aa13.16□□□□□ -0.3
HOMER3-201ENST00000221222 SMCPP49901 116 aaPredicted RBP13.15□□□□□ -0.3
HOMER3-201ENST00000221222 KRTAP13-3Q3SY46 172 aa13.15□□□□□ -0.3
HOMER3-201ENST00000221222 Q6ZQT0 140 aa13.15□□□□□ -0.3
HOMER3-201ENST00000221222 C14orf132Q9NPU4 83 aa13.14□□□□□ -0.31
HOMER3-201ENST00000221222 VPS25Q9BRG1 176 aa13.13□□□□□ -0.31
HOMER3-201ENST00000221222 C21orf62-AS1Q17RA5 79 aa13.08□□□□□ -0.31
HOMER3-201ENST00000221222 A0A1B0GW54 56 aa13.07□□□□□ -0.32
HOMER3-201ENST00000221222 Q96NJ1 140 aa13.07□□□□□ -0.32
HOMER3-201ENST00000221222 CDIP1Q9H305 208 aa13.07□□□□□ -0.32
HOMER3-201ENST00000221222 F8W1H4 67 aa13.04□□□□□ -0.32
HOMER3-201ENST00000221222 LINC00472Q9H8W2 130 aa12.99□□□□□ -0.33
HOMER3-201ENST00000221222 C9orf92A6NGG3 77 aa12.95□□□□□ -0.34
HOMER3-201ENST00000221222 MUC2Q02817 5179 aa12.94□□□□□ -0.34
HOMER3-201ENST00000221222 XP32Q5T750 250 aa12.93□□□□□ -0.34
HOMER3-201ENST00000221222 IGKV4-1P06312 121 aa12.92□□□□□ -0.34
HOMER3-201ENST00000221222 A0A1B0GV90 55 aa12.91□□□□□ -0.34
HOMER3-201ENST00000221222 SIGMAR1Q99720 223 aa12.91□□□□□ -0.34
HOMER3-201ENST00000221222 DEFB116Q30KQ4 102 aa12.9□□□□□ -0.34
HOMER3-201ENST00000221222 ETDBQ3ZM63 59 aa12.89□□□□□ -0.35
HOMER3-201ENST00000221222 J3KT08 172 aa12.86□□□□□ -0.35
HOMER3-201ENST00000221222 NREPQ16612 68 aa12.83□□□□□ -0.36
HOMER3-201ENST00000221222 A0A0U1RQV1 116 aa12.81□□□□□ -0.36
HOMER3-201ENST00000221222 MUC17Q685J3 4493 aa12.81□□□□□ -0.36
HOMER3-201ENST00000221222 SEC61BP60468 96 aaKnown RBP12.76□□□□□ -0.37
HOMER3-201ENST00000221222 A0A1B0GVX0 72 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms