RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 DNAH12Q6ZR08 3092 aa6.26□□□□□ -1.41
KNOP1-201ENST00000219837 ANKRD11Q6UB99 2663 aaPredicted RBP6.25□□□□□ -1.41
KNOP1-201ENST00000219837 Q6ZRN7 208 aaPredicted RBP6.25□□□□□ -1.41
KNOP1-201ENST00000219837 ZFYVE26Q68DK2 2539 aa6.24□□□□□ -1.41
KNOP1-201ENST00000219837 KRTAP13-2Q52LG2 175 aa6.22□□□□□ -1.41
KNOP1-201ENST00000219837 TLN2Q9Y4G6 2542 aa6.21□□□□□ -1.41
KNOP1-201ENST00000219837 F8P00451 2351 aa6.2□□□□□ -1.42
KNOP1-201ENST00000219837 KRTAP25-1Q3LHN0 102 aa6.2□□□□□ -1.42
KNOP1-201ENST00000219837 DOPEY1Q5JWR5 2465 aa6.2□□□□□ -1.42
KNOP1-201ENST00000219837 FASNP49327 2511 aaKnown RBP6.19□□□□□ -1.42
KNOP1-201ENST00000219837 C5orf42Q9H799 3197 aa6.19□□□□□ -1.42
KNOP1-201ENST00000219837 PIEZO1Q92508 2521 aa6.19□□□□□ -1.42
KNOP1-201ENST00000219837 KRTAP7-1Q8IUC3 87 aa6.18□□□□□ -1.42
KNOP1-201ENST00000219837 UTRNP46939 3433 aa6.17□□□□□ -1.42
KNOP1-201ENST00000219837 BPTFQ12830 3046 aa6.17□□□□□ -1.42
KNOP1-201ENST00000219837 USP9XQ93008 2570 aaPredicted RBP6.16□□□□□ -1.42
KNOP1-201ENST00000219837 POLQO75417 2590 aa6.15□□□□□ -1.43
KNOP1-201ENST00000219837 TNP1P09430 55 aa6.14□□□□□ -1.43
KNOP1-201ENST00000219837 MYO18BQ8IUG5 2567 aa6.14□□□□□ -1.43
KNOP1-201ENST00000219837 ACANP16112 2415 aa6.13□□□□□ -1.43
KNOP1-201ENST00000219837 C10orf95Q9H7T3 257 aa6.12□□□□□ -1.43
KNOP1-201ENST00000219837 CHD8Q9HCK8 2581 aa6.12□□□□□ -1.43
KNOP1-201ENST00000219837 A0A1B0GVY2 172 aa6.11□□□□□ -1.43
KNOP1-201ENST00000219837 KRTAP13-1Q8IUC0 172 aa6.11□□□□□ -1.43
KNOP1-201ENST00000219837 PKD1L2Q7Z442 2459 aa6.11□□□□□ -1.43
KNOP1-201ENST00000219837 KRTAP16-1A8MUX0 517 aa6.11□□□□□ -1.43
KNOP1-201ENST00000219837 A6NN06 94 aa6.07□□□□□ -1.44
KNOP1-201ENST00000219837 SPTBN4Q9H254 2564 aa6.03□□□□□ -1.44
KNOP1-201ENST00000219837 KRTAP10-8P60410 259 aa6.03□□□□□ -1.44
KNOP1-201ENST00000219837 KRTAP21-3Q3LHN1 58 aa6□□□□□ -1.45
KNOP1-201ENST00000219837 CEP295Q9C0D2 2601 aa6□□□□□ -1.45
KNOP1-201ENST00000219837 MTORP42345 2549 aa6□□□□□ -1.45
KNOP1-201ENST00000219837 NDUFAF8A1L188 74 aa5.99□□□□□ -1.45
KNOP1-201ENST00000219837 SETD2Q9BYW2 2564 aaPredicted RBP5.97□□□□□ -1.45
KNOP1-201ENST00000219837 XP32Q5T750 250 aa5.96□□□□□ -1.45
KNOP1-201ENST00000219837 USP9YO00507 2555 aaPredicted RBP5.96□□□□□ -1.45
KNOP1-201ENST00000219837 KRTAP10-10P60014 251 aa5.9□□□□□ -1.47
KNOP1-201ENST00000219837 FLNAP21333 2647 aaKnown RBP5.89□□□□□ -1.47
KNOP1-201ENST00000219837 ITPR3Q14573 2671 aa5.86□□□□□ -1.47
KNOP1-201ENST00000219837 CHD7Q9P2D1 2997 aa5.84□□□□□ -1.47
KNOP1-201ENST00000219837 KRTAP1-4P0C5Y4 121 aa5.84□□□□□ -1.47
KNOP1-201ENST00000219837 PP632Q6XCG6 107 aa5.84□□□□□ -1.47
KNOP1-201ENST00000219837 HECTD1Q9ULT8 2610 aa5.84□□□□□ -1.47
KNOP1-201ENST00000219837 MKI67P46013 3256 aaKnown RBP5.84□□□□□ -1.48
KNOP1-201ENST00000219837 PRO2289Q9P1D8 64 aa5.82□□□□□ -1.48
KNOP1-201ENST00000219837 TPRXLQ17RH7 258 aa5.82□□□□□ -1.48
KNOP1-201ENST00000219837 UNC80Q8N2C7 3258 aa5.78□□□□□ -1.48
KNOP1-201ENST00000219837 CEP350Q5VT06 3117 aa5.76□□□□□ -1.49
KNOP1-201ENST00000219837 H0YAA0 97 aa5.76□□□□□ -1.49
KNOP1-201ENST00000219837 PCNTO95613 3336 aa5.76□□□□□ -1.49
KNOP1-201ENST00000219837 KRTAP13-3Q3SY46 172 aa5.7□□□□□ -1.5
KNOP1-201ENST00000219837 HTTP42858 3142 aa5.68□□□□□ -1.5
KNOP1-201ENST00000219837 CHD9Q3L8U1 2897 aa5.67□□□□□ -1.5
KNOP1-201ENST00000219837 MGAM2Q2M2H8 2515 aa5.66□□□□□ -1.5
KNOP1-201ENST00000219837 P0C880 135 aa5.66□□□□□ -1.5
KNOP1-201ENST00000219837 HELZ2Q9BYK8 2649 aaKnown RBP5.65□□□□□ -1.51
KNOP1-201ENST00000219837 XIRP2A4UGR9 3374 aa5.64□□□□□ -1.51
KNOP1-201ENST00000219837 USP24Q9UPU5 2620 aa5.64□□□□□ -1.51
KNOP1-201ENST00000219837 ATRQ13535 2644 aa5.64□□□□□ -1.51
KNOP1-201ENST00000219837 EPG5Q9HCE0 2579 aa5.63□□□□□ -1.51
KNOP1-201ENST00000219837 DNAH14Q0VDD8 3507 aa5.63□□□□□ -1.51
KNOP1-201ENST00000219837 BRCA2P51587 3418 aa5.62□□□□□ -1.51
KNOP1-201ENST00000219837 PRRC2CQ9Y520 2896 aaKnown RBP5.62□□□□□ -1.51
KNOP1-201ENST00000219837 TRIOO75962 3097 aa5.6□□□□□ -1.51
KNOP1-201ENST00000219837 AKAP13Q12802 2813 aa5.59□□□□□ -1.52
KNOP1-201ENST00000219837 CFAP46Q8IYW2 2715 aa5.59□□□□□ -1.52
KNOP1-201ENST00000219837 CFAP54Q96N23 3096 aa5.59□□□□□ -1.52
KNOP1-201ENST00000219837 CDH23Q9H251 3354 aa5.58□□□□□ -1.52
KNOP1-201ENST00000219837 COL6A3P12111 3177 aa5.56□□□□□ -1.52
KNOP1-201ENST00000219837 KMT2BQ9UMN6 2715 aaPredicted RBP5.56□□□□□ -1.52
KNOP1-201ENST00000219837 MGAQ8IWI9 3026 aa5.55□□□□□ -1.52
KNOP1-201ENST00000219837 CELSR3Q9NYQ7 3312 aa5.54□□□□□ -1.52
KNOP1-201ENST00000219837 MAST4O15021 2626 aa5.53□□□□□ -1.52
KNOP1-201ENST00000219837 RANBP2P49792 3224 aaKnown RBP5.53□□□□□ -1.52
KNOP1-201ENST00000219837 TRANK1O15050 2925 aa5.53□□□□□ -1.52
KNOP1-201ENST00000219837 SPTBN5Q9NRC6 3674 aaKnown RBP5.52□□□□□ -1.53
KNOP1-201ENST00000219837 KRTAP12-2P59991 146 aa5.51□□□□□ -1.53
KNOP1-201ENST00000219837 A0A0C4DFX4 3053 aa5.51□□□□□ -1.53
KNOP1-201ENST00000219837 LAMA3Q16787 3333 aa5.5□□□□□ -1.53
KNOP1-201ENST00000219837 SZT2Q5T011 3432 aa5.5□□□□□ -1.53
KNOP1-201ENST00000219837 DMBT1Q9UGM3 2413 aaPredicted RBP5.49□□□□□ -1.53
KNOP1-201ENST00000219837 CHD6Q8TD26 2715 aa5.45□□□□□ -1.54
KNOP1-201ENST00000219837 TEX15Q9BXT5 2789 aa5.43□□□□□ -1.54
KNOP1-201ENST00000219837 NBEAL1Q6ZS30 2694 aa5.42□□□□□ -1.54
KNOP1-201ENST00000219837 TEP1Q99973 2627 aaKnown RBP5.42□□□□□ -1.54
KNOP1-201ENST00000219837 WDFY4Q6ZS81 3184 aa5.41□□□□□ -1.54
KNOP1-201ENST00000219837 CENPEQ02224 2701 aa5.4□□□□□ -1.54
KNOP1-201ENST00000219837 KRTAP13-4Q3LI77 160 aa5.4□□□□□ -1.55
KNOP1-201ENST00000219837 ITPR2Q14571 2701 aa5.39□□□□□ -1.55
KNOP1-201ENST00000219837 FLNBO75369 2602 aaKnown RBP5.39□□□□□ -1.55
KNOP1-201ENST00000219837 FLG2Q5D862 2391 aaPredicted RBP5.38□□□□□ -1.55
KNOP1-201ENST00000219837 GCN1Q92616 2671 aaKnown RBP5.37□□□□□ -1.55
KNOP1-201ENST00000219837 PRUNE2Q8WUY3 3088 aa5.37□□□□□ -1.55
KNOP1-201ENST00000219837 LAMA2P24043 3122 aaKnown RBP5.36□□□□□ -1.55
KNOP1-201ENST00000219837 USP34Q70CQ2 3546 aa5.35□□□□□ -1.55
KNOP1-201ENST00000219837 KRTAP15-1Q3LI76 137 aa5.34□□□□□ -1.55
KNOP1-201ENST00000219837 UNC79Q9P2D8 2635 aa5.34□□□□□ -1.55
KNOP1-201ENST00000219837 BAHCC1Q9P281 2608 aa5.34□□□□□ -1.56
KNOP1-201ENST00000219837 LRBAP50851 2863 aa5.33□□□□□ -1.56
KNOP1-201ENST00000219837 LAMA1P25391 3075 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms