RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 TNP2Q05952 138 aa2.78□□□□□ -1.96
CHD9-201ENST00000219084 A0A1W2PNN7 141 aa2.78□□□□□ -1.96
CHD9-201ENST00000219084 Q8N9P0 234 aaPredicted RBP2.78□□□□□ -1.96
CHD9-201ENST00000219084 NBEAL2Q6ZNJ1 2754 aa2.77□□□□□ -1.97
CHD9-201ENST00000219084 DMAC1Q96GE9 116 aa2.77□□□□□ -1.97
CHD9-201ENST00000219084 CELSR2Q9HCU4 2923 aa2.77□□□□□ -1.97
CHD9-201ENST00000219084 GOLGB1Q14789 3259 aaKnown RBP2.77□□□□□ -1.97
CHD9-201ENST00000219084 SRCAPQ6ZRS2 3230 aa2.77□□□□□ -1.97
CHD9-201ENST00000219084 KRTAP10-3P60369 221 aa2.76□□□□□ -1.97
CHD9-201ENST00000219084 MMP24-AS1A0A0U1RRL7 71 aa2.76□□□□□ -1.97
CHD9-201ENST00000219084 LUZP6Q538Z0 58 aa2.76□□□□□ -1.97
CHD9-201ENST00000219084 PLAC8Q9NZF1 115 aa2.76□□□□□ -1.97
CHD9-201ENST00000219084 LINC00472Q9H8W2 130 aa2.76□□□□□ -1.97
CHD9-201ENST00000219084 A0A1B0GU33 70 aa2.76□□□□□ -1.97
CHD9-201ENST00000219084 C5orf42Q9H799 3197 aa2.76□□□□□ -1.97
CHD9-201ENST00000219084 FP248Q71RG6 208 aaPredicted RBP2.76□□□□□ -1.97
CHD9-201ENST00000219084 KRTAP1-1Q07627 177 aa2.75□□□□□ -1.97
CHD9-201ENST00000219084 VWFP04275 2813 aa2.75□□□□□ -1.97
CHD9-201ENST00000219084 LINC00483Q53H64 154 aa2.75□□□□□ -1.97
CHD9-201ENST00000219084 Q6ZR54 194 aa2.75□□□□□ -1.97
CHD9-201ENST00000219084 CHD7Q9P2D1 2997 aa2.75□□□□□ -1.97
CHD9-201ENST00000219084 Q5VV11 94 aa2.75□□□□□ -1.97
CHD9-201ENST00000219084 LINC01554Q52M75 96 aa2.75□□□□□ -1.97
CHD9-201ENST00000219084 PKD1L1Q8TDX9 2849 aa2.74□□□□□ -1.97
CHD9-201ENST00000219084 HRES1P13985 223 aa2.74□□□□□ -1.97
CHD9-201ENST00000219084 CHD9Q3L8U1 2897 aa2.74□□□□□ -1.97
CHD9-201ENST00000219084 KRTAP17-1Q9BYP8 105 aa2.74□□□□□ -1.97
CHD9-201ENST00000219084 ZCCHC13Q8WW36 166 aaKnown RBP2.74□□□□□ -1.97
CHD9-201ENST00000219084 MXRA5Q9NR99 2828 aa2.74□□□□□ -1.97
CHD9-201ENST00000219084 NF1P21359 2839 aa2.74□□□□□ -1.97
CHD9-201ENST00000219084 IGSF10Q6WRI0 2623 aa2.73□□□□□ -1.97
CHD9-201ENST00000219084 NBEAQ8NFP9 2946 aa2.73□□□□□ -1.97
CHD9-201ENST00000219084 TNRC18O15417 2968 aaPredicted RBP2.71□□□□□ -1.98
CHD9-201ENST00000219084 C9orf92A6NGG3 77 aa2.7□□□□□ -1.98
CHD9-201ENST00000219084 RPS29P62273 56 aaKnown RBP2.7□□□□□ -1.98
CHD9-201ENST00000219084 Q5W150 140 aa2.7□□□□□ -1.98
CHD9-201ENST00000219084 COX6B2Q6YFQ2 88 aa2.7□□□□□ -1.98
CHD9-201ENST00000219084 CASC10Q5T4H9 136 aa2.7□□□□□ -1.98
CHD9-201ENST00000219084 Q8N1X5 172 aa2.7□□□□□ -1.98
CHD9-201ENST00000219084 KRTAP4-16G5E9R7 235 aaPredicted RBP2.7□□□□□ -1.98
CHD9-201ENST00000219084 S4R3F8 94 aa2.7□□□□□ -1.98
CHD9-201ENST00000219084 PRR26Q8N8Z3 221 aa2.69□□□□□ -1.98
CHD9-201ENST00000219084 KRTAP26-1Q6PEX3 210 aa2.69□□□□□ -1.98
CHD9-201ENST00000219084 A0A0G2JQZ4 141 aa2.69□□□□□ -1.98
CHD9-201ENST00000219084 CEP350Q5VT06 3117 aa2.69□□□□□ -1.98
CHD9-201ENST00000219084 CYSTM1Q9H1C7 97 aa2.69□□□□□ -1.98
CHD9-201ENST00000219084 CSAG1Q6PB30 78 aa2.68□□□□□ -1.98
CHD9-201ENST00000219084 Q8NDZ9 215 aa2.68□□□□□ -1.98
CHD9-201ENST00000219084 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.67□□□□□ -1.98
CHD9-201ENST00000219084 CFAP54Q96N23 3096 aa2.67□□□□□ -1.98
CHD9-201ENST00000219084 KRTAP29-1A8MX34 341 aaPredicted RBP2.67□□□□□ -1.98
CHD9-201ENST00000219084 ROMO1P60602 79 aa2.67□□□□□ -1.98
CHD9-201ENST00000219084 Q6ZSA8 131 aa2.67□□□□□ -1.98
CHD9-201ENST00000219084 A0A0A0MQY5 61 aa2.67□□□□□ -1.98
CHD9-201ENST00000219084 ANAPC11Q9NYG5 84 aa2.67□□□□□ -1.98
CHD9-201ENST00000219084 A0A0D9SG42 100 aa2.66□□□□□ -1.98
CHD9-201ENST00000219084 SPATA8Q6RVD6 105 aa2.66□□□□□ -1.98
CHD9-201ENST00000219084 RPL37P61927 97 aaKnown RBP2.65□□□□□ -1.99
CHD9-201ENST00000219084 PDZD2O15018 2839 aa2.65□□□□□ -1.99
CHD9-201ENST00000219084 OXTP01178 125 aa2.65□□□□□ -1.99
CHD9-201ENST00000219084 UTRNP46939 3433 aa2.65□□□□□ -1.99
CHD9-201ENST00000219084 H1FX-AS1Q4G0G2 97 aa2.65□□□□□ -1.99
CHD9-201ENST00000219084 A0A0C4DFX4 3053 aa2.64□□□□□ -1.99
CHD9-201ENST00000219084 PCNTO95613 3336 aa2.64□□□□□ -1.99
CHD9-201ENST00000219084 SPINK7P58062 85 aa2.64□□□□□ -1.99
CHD9-201ENST00000219084 TENM3Q9P273 2699 aa2.63□□□□□ -1.99
CHD9-201ENST00000219084 MGAQ8IWI9 3026 aa2.63□□□□□ -1.99
CHD9-201ENST00000219084 CAMK2N1Q7Z7J9 78 aa2.63□□□□□ -1.99
CHD9-201ENST00000219084 TACC2O95359 2948 aa2.63□□□□□ -1.99
CHD9-201ENST00000219084 A6NN06 94 aa2.62□□□□□ -1.99
CHD9-201ENST00000219084 SEC61BP60468 96 aaKnown RBP2.62□□□□□ -1.99
CHD9-201ENST00000219084 MEGF8Q7Z7M0 2845 aa2.62□□□□□ -1.99
CHD9-201ENST00000219084 H3BS24 57 aa2.62□□□□□ -1.99
CHD9-201ENST00000219084 HTTP42858 3142 aa2.62□□□□□ -1.99
CHD9-201ENST00000219084 ZFHX3Q15911 3703 aa2.61□□□□□ -1.99
CHD9-201ENST00000219084 TENM2Q9NT68 2774 aa2.61□□□□□ -1.99
CHD9-201ENST00000219084 LAMA2P24043 3122 aaKnown RBP2.61□□□□□ -1.99
CHD9-201ENST00000219084 KRTAP21-3Q3LHN1 58 aa2.61□□□□□ -1.99
CHD9-201ENST00000219084 TENM1Q9UKZ4 2725 aa2.6□□□□□ -1.99
CHD9-201ENST00000219084 R4GN34 69 aa2.6□□□□□ -1.99
CHD9-201ENST00000219084 FRYQ5TBA9 3013 aa2.59□□□□□ -1.99
CHD9-201ENST00000219084 ASH1LQ9NR48 2969 aaKnown RBP2.59□□□□□ -1.99
CHD9-201ENST00000219084 M0QZ58 72 aa2.59□□□□□ -1.99
CHD9-201ENST00000219084 SMR3BP02814 79 aaPredicted RBP2.59□□□□□ -1.99
CHD9-201ENST00000219084 PANO1I0J062 215 aa2.59□□□□□ -2
CHD9-201ENST00000219084 ZANQ9Y493 2812 aa2.58□□□□□ -2
CHD9-201ENST00000219084 KRTAP1-5Q9BYS1 174 aa2.58□□□□□ -2
CHD9-201ENST00000219084 VPS13AQ96RL7 3174 aa2.57□□□□□ -2
CHD9-201ENST00000219084 PRAC1Q96KF2 57 aa2.57□□□□□ -2
CHD9-201ENST00000219084 KRTAP25-1Q3LHN0 102 aa2.56□□□□□ -2
CHD9-201ENST00000219084 KRTAP13-1Q8IUC0 172 aa2.56□□□□□ -2
CHD9-201ENST00000219084 TGP01266 2768 aa2.55□□□□□ -2
CHD9-201ENST00000219084 M0R2T5 61 aa2.54□□□□□ -2
CHD9-201ENST00000219084 FRYLO94915 3013 aa2.54□□□□□ -2
CHD9-201ENST00000219084 TRIOO75962 3097 aa2.54□□□□□ -2
CHD9-201ENST00000219084 KALRNO60229 2985 aa2.53□□□□□ -2
CHD9-201ENST00000219084 MKI67P46013 3256 aaKnown RBP2.53□□□□□ -2
CHD9-201ENST00000219084 Q6ZRN7 208 aaPredicted RBP2.53□□□□□ -2
CHD9-201ENST00000219084 Q5VSD8 79 aa2.52□□□□□ -2.01
CHD9-201ENST00000219084 KRTAP16-1A8MUX0 517 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms