RNA–Protein interactions for RNA: ENST00000183605.9

CLDN18-201, Transcript of claudin 18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLDN18, Length 3,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-201ENST00000183605 SPANXA2-OT1Q8N9U9 137 aa6.45□□□□□ -1.38
CLDN18-201ENST00000183605 TEP1Q99973 2627 aaKnown RBP6.45□□□□□ -1.38
CLDN18-201ENST00000183605 TNP2Q05952 138 aa6.43□□□□□ -1.38
CLDN18-201ENST00000183605 LCA10Q71F78 164 aa6.43□□□□□ -1.38
CLDN18-201ENST00000183605 C7orf65Q6ZTY9 151 aa6.42□□□□□ -1.38
CLDN18-201ENST00000183605 NBPF19A0A087WUL8 3843 aa6.42□□□□□ -1.38
CLDN18-201ENST00000183605 LINC01556Q5JQF7 62 aa6.41□□□□□ -1.38
CLDN18-201ENST00000183605 Q75L30 129 aa6.41□□□□□ -1.38
CLDN18-201ENST00000183605 CDC42SE1Q9NRR8 79 aa6.41□□□□□ -1.38
CLDN18-201ENST00000183605 SMR3AQ99954 134 aa6.41□□□□□ -1.38
CLDN18-201ENST00000183605 C11orf45Q8TAV5 145 aa6.4□□□□□ -1.38
CLDN18-201ENST00000183605 HECTD1Q9ULT8 2610 aa6.4□□□□□ -1.39
CLDN18-201ENST00000183605 A8MWP4 228 aa6.39□□□□□ -1.39
CLDN18-201ENST00000183605 KRTAP10-3P60369 221 aa6.39□□□□□ -1.39
CLDN18-201ENST00000183605 KRTAP26-1Q6PEX3 210 aa6.39□□□□□ -1.39
CLDN18-201ENST00000183605 CASC10Q5T4H9 136 aa6.37□□□□□ -1.39
CLDN18-201ENST00000183605 HIVEP1P15822 2718 aa6.37□□□□□ -1.39
CLDN18-201ENST00000183605 IGHV6-1A0A0B4J1U7 121 aa6.36□□□□□ -1.39
CLDN18-201ENST00000183605 SPRR1AP35321 89 aa6.36□□□□□ -1.39
CLDN18-201ENST00000183605 CNBPP62633 177 aaKnown RBP6.36□□□□□ -1.39
CLDN18-201ENST00000183605 KRTAP1-3Q8IUG1 177 aa6.36□□□□□ -1.39
CLDN18-201ENST00000183605 PLA2G2DQ9UNK4 145 aa6.36□□□□□ -1.39
CLDN18-201ENST00000183605 FLNBO75369 2602 aaKnown RBP6.36□□□□□ -1.39
CLDN18-201ENST00000183605 IGLV9-49A0A0B4J1Y8 123 aa6.36□□□□□ -1.39
CLDN18-201ENST00000183605 KRTAP4-16G5E9R7 235 aaPredicted RBP6.36□□□□□ -1.39
CLDN18-201ENST00000183605 ANK2Q01484 3957 aa6.35□□□□□ -1.39
CLDN18-201ENST00000183605 H3BNG1 76 aa6.35□□□□□ -1.39
CLDN18-201ENST00000183605 TLX1NBP0CAT3 122 aa6.35□□□□□ -1.39
CLDN18-201ENST00000183605 MOBPQ13875 183 aa6.35□□□□□ -1.39
CLDN18-201ENST00000183605 HELZ2Q9BYK8 2649 aaKnown RBP6.35□□□□□ -1.39
CLDN18-201ENST00000183605 IGLV7-46A0A075B6I9 117 aa6.34□□□□□ -1.39
CLDN18-201ENST00000183605 A6NN06 94 aa6.33□□□□□ -1.4
CLDN18-201ENST00000183605 KRTAP29-1A8MX34 341 aaPredicted RBP6.33□□□□□ -1.4
CLDN18-201ENST00000183605 SPINK7P58062 85 aa6.33□□□□□ -1.4
CLDN18-201ENST00000183605 PHF5AQ7RTV0 110 aaKnown RBP6.33□□□□□ -1.4
CLDN18-201ENST00000183605 VWFP04275 2813 aa6.32□□□□□ -1.4
CLDN18-201ENST00000183605 IGLV5-37A0A075B6J1 123 aa6.32□□□□□ -1.4
CLDN18-201ENST00000183605 PRAC1Q96KF2 57 aa6.32□□□□□ -1.4
CLDN18-201ENST00000183605 TP53AIP1Q9HCN2 124 aa6.32□□□□□ -1.4
CLDN18-201ENST00000183605 C9orf163Q8N9P6 203 aa6.31□□□□□ -1.4
CLDN18-201ENST00000183605 LINC01558Q9Y6Z2 57 aa6.31□□□□□ -1.4
CLDN18-201ENST00000183605 SPINK6Q6UWN8 80 aa6.3□□□□□ -1.4
CLDN18-201ENST00000183605 PRR26Q8N8Z3 221 aa6.3□□□□□ -1.4
CLDN18-201ENST00000183605 DNAH10OSP0CZ25 163 aa6.29□□□□□ -1.4
CLDN18-201ENST00000183605 ANK3Q12955 4377 aaKnown RBP6.29□□□□□ -1.4
CLDN18-201ENST00000183605 INAFM1C9JVW0 142 aa6.29□□□□□ -1.4
CLDN18-201ENST00000183605 UBE2DNLQ8IWF7 75 aa6.29□□□□□ -1.4
CLDN18-201ENST00000183605 MMP24-AS1A0A0U1RRL7 71 aa6.27□□□□□ -1.41
CLDN18-201ENST00000183605 CHTF8P0CG12 524 aa6.27□□□□□ -1.41
CLDN18-201ENST00000183605 ITPR2Q14571 2701 aa6.27□□□□□ -1.41
CLDN18-201ENST00000183605 KRTAP1-1Q07627 177 aa6.27□□□□□ -1.41
CLDN18-201ENST00000183605 KRTAP7-1Q8IUC3 87 aa6.27□□□□□ -1.41
CLDN18-201ENST00000183605 LINC00472Q9H8W2 130 aa6.27□□□□□ -1.41
CLDN18-201ENST00000183605 NOTCH1P46531 2555 aa6.26□□□□□ -1.41
CLDN18-201ENST00000183605 LINC00313P59037 77 aa6.26□□□□□ -1.41
CLDN18-201ENST00000183605 OTOGQ6ZRI0 2925 aa6.26□□□□□ -1.41
CLDN18-201ENST00000183605 HRES1P13985 223 aa6.26□□□□□ -1.41
CLDN18-201ENST00000183605 COL6A5A8TX70 2615 aa6.25□□□□□ -1.41
CLDN18-201ENST00000183605 C8orf17Q9NRJ1 99 aa6.25□□□□□ -1.41
CLDN18-201ENST00000183605 PKD1L1Q8TDX9 2849 aa6.25□□□□□ -1.41
CLDN18-201ENST00000183605 C8orf87E5RJ46 101 aa6.25□□□□□ -1.41
CLDN18-201ENST00000183605 MDFIQ99750 246 aa6.24□□□□□ -1.41
CLDN18-201ENST00000183605 IGLV8-61A0A075B6I0 122 aa6.24□□□□□ -1.41
CLDN18-201ENST00000183605 A0A1B0GU69 56 aa6.23□□□□□ -1.41
CLDN18-201ENST00000183605 MAST4O15021 2626 aa6.23□□□□□ -1.41
CLDN18-201ENST00000183605 ACYP2P14621 99 aa6.21□□□□□ -1.41
CLDN18-201ENST00000183605 MRPL34Q9BQ48 92 aaKnown RBP6.21□□□□□ -1.41
CLDN18-201ENST00000183605 RETNLBQ9BQ08 111 aa6.21□□□□□ -1.42
CLDN18-201ENST00000183605 LINC01554Q52M75 96 aa6.19□□□□□ -1.42
CLDN18-201ENST00000183605 A0A1B0GVX0 72 aa6.19□□□□□ -1.42
CLDN18-201ENST00000183605 H3BS24 57 aa6.19□□□□□ -1.42
CLDN18-201ENST00000183605 ADM2Q7Z4H4 148 aa6.18□□□□□ -1.42
CLDN18-201ENST00000183605 C14orf177Q52M58 125 aa6.17□□□□□ -1.42
CLDN18-201ENST00000183605 TENM1Q9UKZ4 2725 aa6.17□□□□□ -1.42
CLDN18-201ENST00000183605 TENM3Q9P273 2699 aa6.17□□□□□ -1.42
CLDN18-201ENST00000183605 NSD1Q96L73 2696 aaPredicted RBP6.17□□□□□ -1.42
CLDN18-201ENST00000183605 SRRM2Q9UQ35 2752 aaKnown RBP6.16□□□□□ -1.42
CLDN18-201ENST00000183605 KRTAP10-11P60412 298 aa6.15□□□□□ -1.42
CLDN18-201ENST00000183605 CMYA5Q8N3K9 4069 aa6.15□□□□□ -1.42
CLDN18-201ENST00000183605 NBEAL1Q6ZS30 2694 aa6.15□□□□□ -1.43
CLDN18-201ENST00000183605 K7EIL1 84 aa6.15□□□□□ -1.43
CLDN18-201ENST00000183605 DNAH3Q8TD57 4116 aa6.14□□□□□ -1.43
CLDN18-201ENST00000183605 ZNF469Q96JG9 3925 aaPredicted RBP6.14□□□□□ -1.43
CLDN18-201ENST00000183605 MIR22HGQ0VDD5 57 aa6.13□□□□□ -1.43
CLDN18-201ENST00000183605 SPRR1BP22528 89 aa6.12□□□□□ -1.43
CLDN18-201ENST00000183605 Q6ZR54 194 aa6.12□□□□□ -1.43
CLDN18-201ENST00000183605 STAB1Q9NY15 2570 aa6.12□□□□□ -1.43
CLDN18-201ENST00000183605 UQCR11O14957 56 aa6.12□□□□□ -1.43
CLDN18-201ENST00000183605 ANAPC11Q9NYG5 84 aa6.12□□□□□ -1.43
CLDN18-201ENST00000183605 KRTAP11-1Q8IUC1 163 aa6.12□□□□□ -1.43
CLDN18-201ENST00000183605 CIRBP-AS1Q8TBR5 109 aa6.11□□□□□ -1.43
CLDN18-201ENST00000183605 ZNF706Q9Y5V0 76 aaPredicted RBP6.11□□□□□ -1.43
CLDN18-201ENST00000183605 MGAM2Q2M2H8 2515 aa6.1□□□□□ -1.43
CLDN18-201ENST00000183605 SPINK1P00995 79 aa6.09□□□□□ -1.43
CLDN18-201ENST00000183605 PLAC8Q9NZF1 115 aa6.08□□□□□ -1.44
CLDN18-201ENST00000183605 A0A087X002 238 aa6.08□□□□□ -1.44
CLDN18-201ENST00000183605 NOTCH2NLQ7Z3S9 236 aa6.08□□□□□ -1.44
CLDN18-201ENST00000183605 CSAG1Q6PB30 78 aa6.07□□□□□ -1.44
CLDN18-201ENST00000183605 IGKV2D-30A0A075B6S6 120 aa6.06□□□□□ -1.44
CLDN18-201ENST00000183605 PLA2G1BP04054 148 aaKnown RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms