RNA–Protein interactions for RNA: ENSMUST00000107934.1

Shank1-201, Transcript of SH3 and multiple ankyrin repeat domains protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Shank1, Length 6,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1-201ENSMUST00000107934 Ighv1-55A0A075B5W6 117 aa12.66□□□□□ -0.38
Shank1-201ENSMUST00000107934 Trav8-1A0A075B641 109 aa12.66□□□□□ -0.38
Shank1-201ENSMUST00000107934 Nit2Q9JHW2 276 aa12.66□□□□□ -0.38
Shank1-201ENSMUST00000107934 Atg2aQ6P4T0 1914 aa12.66□□□□□ -0.38
Shank1-201ENSMUST00000107934 Tmem238A9JSM3 176 aa12.66□□□□□ -0.38
Shank1-201ENSMUST00000107934 Tpsg1Q9QUL7 311 aa12.66□□□□□ -0.38
Shank1-201ENSMUST00000107934 Trav14n-3A0A075B645 120 aa12.65□□□□□ -0.38
Shank1-201ENSMUST00000107934 Defa26Q3L180 93 aa12.65□□□□□ -0.38
Shank1-201ENSMUST00000107934 Ighv1-39A0A075B5V5 117 aa12.65□□□□□ -0.38
Shank1-201ENSMUST00000107934 Tm4sf19E9Q9H8 206 aa12.65□□□□□ -0.38
Shank1-201ENSMUST00000107934 Prok1Q14A28 105 aa12.65□□□□□ -0.38
Shank1-201ENSMUST00000107934 Igkv5-37A0A140T8N4 115 aa12.65□□□□□ -0.38
Shank1-201ENSMUST00000107934 Hist3h2bbQ8CGP0 126 aa12.65□□□□□ -0.38
Shank1-201ENSMUST00000107934 Hist3h2baQ9D2U9 126 aa12.65□□□□□ -0.38
Shank1-201ENSMUST00000107934 Ighv1-58A0A075B5W9 117 aa12.65□□□□□ -0.38
Shank1-201ENSMUST00000107934 GlrxQ9QUH0 107 aa12.65□□□□□ -0.38
Shank1-201ENSMUST00000107934 Urb1Q571H0 2274 aaKnown RBP12.65□□□□□ -0.38
Shank1-201ENSMUST00000107934 Ank3G5E8K5 1961 aa12.65□□□□□ -0.39
Shank1-201ENSMUST00000107934 Dock4P59764 1978 aa12.65□□□□□ -0.39
Shank1-201ENSMUST00000107934 Trav6d-7A0A075B6B0 112 aa12.65□□□□□ -0.39
Shank1-201ENSMUST00000107934 4931422A03RikA2BHN9 113 aa12.65□□□□□ -0.39
Shank1-201ENSMUST00000107934 Rnf114Q9ET26 229 aa12.65□□□□□ -0.39
Shank1-201ENSMUST00000107934 Tmem86bQ497J1 226 aa12.64□□□□□ -0.39
Shank1-201ENSMUST00000107934 Pth2Q91W27 100 aa12.64□□□□□ -0.39
Shank1-201ENSMUST00000107934 P01896 185 aa12.64□□□□□ -0.39
Shank1-201ENSMUST00000107934 P03985 172 aa12.64□□□□□ -0.39
Shank1-201ENSMUST00000107934 Ntf4Q80VU4 209 aa12.64□□□□□ -0.39
Shank1-201ENSMUST00000107934 Dock8Q8C147 2100 aa12.64□□□□□ -0.39
Shank1-201ENSMUST00000107934 Chac1Q8R3J5 223 aa12.64□□□□□ -0.39
Shank1-201ENSMUST00000107934 LbhQ9CX60 105 aa12.64□□□□□ -0.39
Shank1-201ENSMUST00000107934 Q9D8L0 127 aa12.64□□□□□ -0.39
Shank1-201ENSMUST00000107934 Klk1b4P00757 256 aa12.63□□□□□ -0.39
Shank1-201ENSMUST00000107934 Igkv3-1A0A075B5P1 119 aa12.63□□□□□ -0.39
Shank1-201ENSMUST00000107934 P01787 123 aa12.63□□□□□ -0.39
Shank1-201ENSMUST00000107934 Tm4sf20Q9CQY8 226 aa12.63□□□□□ -0.39
Shank1-201ENSMUST00000107934 LenepQ9WVB6 61 aa12.63□□□□□ -0.39
Shank1-201ENSMUST00000107934 Spta1P08032 2415 aa12.63□□□□□ -0.39
Shank1-201ENSMUST00000107934 Kif26aQ52KG5 1881 aa12.62□□□□□ -0.39
Shank1-201ENSMUST00000107934 Ighv5-8A0A075B676 92 aa12.62□□□□□ -0.39
Shank1-201ENSMUST00000107934 Gm10881P01642 115 aa12.62□□□□□ -0.39
Shank1-201ENSMUST00000107934 Msrb3Q8BU85 253 aa12.62□□□□□ -0.39
Shank1-201ENSMUST00000107934 Fstl3Q9EQC7 256 aa12.62□□□□□ -0.39
Shank1-201ENSMUST00000107934 Ca5aP23589 299 aa12.62□□□□□ -0.39
Shank1-201ENSMUST00000107934 Tcl1b4P56844 120 aa12.62□□□□□ -0.39
Shank1-201ENSMUST00000107934 Rp1P56716 2095 aa12.62□□□□□ -0.39
Shank1-201ENSMUST00000107934 Igkv6-15A0A140T8M5 115 aa12.62□□□□□ -0.39
Shank1-201ENSMUST00000107934 Rs1Q9Z1L4 224 aa12.62□□□□□ -0.39
Shank1-201ENSMUST00000107934 Nup210lQ9D2F7 1881 aa12.61□□□□□ -0.39
Shank1-201ENSMUST00000107934 Cacna1aP97445 2368 aa12.61□□□□□ -0.39
Shank1-201ENSMUST00000107934 Gm6040Q4QY32 63 aa12.61□□□□□ -0.39
Shank1-201ENSMUST00000107934 Mogat1Q91ZV4 335 aa12.61□□□□□ -0.39
Shank1-201ENSMUST00000107934 Rai1Q61818 1889 aa12.61□□□□□ -0.39
Shank1-201ENSMUST00000107934 Gm15091B1AZM2 449 aa12.61□□□□□ -0.39
Shank1-201ENSMUST00000107934 Gm9513B3GLJ6 99 aa12.61□□□□□ -0.39
Shank1-201ENSMUST00000107934 Znhit3Q9CQK1 151 aa12.61□□□□□ -0.39
Shank1-201ENSMUST00000107934 Ssbp1Q9CYR0 152 aaKnown RBP12.61□□□□□ -0.39
Shank1-201ENSMUST00000107934 Plac1Q9JI83 173 aa12.61□□□□□ -0.39
Shank1-201ENSMUST00000107934 Igkv4-62A0A0G2JDW9 117 aa12.61□□□□□ -0.39
Shank1-201ENSMUST00000107934 Igkv19-93A0A0G2JFZ3 115 aa12.61□□□□□ -0.39
Shank1-201ENSMUST00000107934 Tusc5Q8C838 173 aa12.61□□□□□ -0.39
Shank1-201ENSMUST00000107934 Tpsab1Q02844 273 aa12.61□□□□□ -0.39
Shank1-201ENSMUST00000107934 Prok2Q9QXU7 128 aa12.61□□□□□ -0.39
Shank1-201ENSMUST00000107934 Tmem141A2AJB2 108 aa12.61□□□□□ -0.39
Shank1-201ENSMUST00000107934 1500009C09RikD3YYW9 81 aa12.61□□□□□ -0.39
Shank1-201ENSMUST00000107934 Dazap2Q9DCP9 168 aa12.61□□□□□ -0.39
Shank1-201ENSMUST00000107934 Gm28778A0A087WSK7 233 aa12.6□□□□□ -0.39
Shank1-201ENSMUST00000107934 Cdkn2aQ64364 169 aa12.6□□□□□ -0.39
Shank1-201ENSMUST00000107934 CntfrO88507 372 aa12.6□□□□□ -0.39
Shank1-201ENSMUST00000107934 P01790 122 aa12.6□□□□□ -0.39
Shank1-201ENSMUST00000107934 Hbb-b2P02089 147 aa12.6□□□□□ -0.39
Shank1-201ENSMUST00000107934 Rpp25lQ99JH1 163 aa12.6□□□□□ -0.39
Shank1-201ENSMUST00000107934 Gm26938S4R185 226 aa12.6□□□□□ -0.39
Shank1-201ENSMUST00000107934 DdtO35215 118 aa12.6□□□□□ -0.39
Shank1-201ENSMUST00000107934 Lmo1Q924W9 156 aa12.59□□□□□ -0.39
Shank1-201ENSMUST00000107934 Wt1P22561 449 aa12.59□□□□□ -0.39
Shank1-201ENSMUST00000107934 Pde6hP61249 83 aa12.59□□□□□ -0.39
Shank1-201ENSMUST00000107934 Jpt2Q6PGH2 190 aaKnown RBP12.59□□□□□ -0.39
Shank1-201ENSMUST00000107934 Spaca3Q9D9X8 221 aa12.59□□□□□ -0.39
Shank1-201ENSMUST00000107934 Adamts9E9PUN6 1931 aa12.59□□□□□ -0.39
Shank1-201ENSMUST00000107934 Minos1Q7TNS2 76 aa12.59□□□□□ -0.39
Shank1-201ENSMUST00000107934 4930583I09RikQ9D2E3 102 aa12.59□□□□□ -0.39
Shank1-201ENSMUST00000107934 Gm26727M0QWT1 121 aa12.59□□□□□ -0.39
Shank1-201ENSMUST00000107934 NmbQ9CR53 121 aa12.59□□□□□ -0.39
Shank1-201ENSMUST00000107934 Igkv3-9A0A140T8P4 119 aa12.58□□□□□ -0.39
Shank1-201ENSMUST00000107934 BC049762Q8C601 163 aa12.58□□□□□ -0.39
Shank1-201ENSMUST00000107934 Gm45785A0A1B0GT05 94 aa12.58□□□□□ -0.4
Shank1-201ENSMUST00000107934 Samd13D3YUG0 102 aa12.58□□□□□ -0.4
Shank1-201ENSMUST00000107934 Ighv3-6P18531 116 aa12.58□□□□□ -0.4
Shank1-201ENSMUST00000107934 Lamtor2Q9JHS3 125 aa12.58□□□□□ -0.4
Shank1-201ENSMUST00000107934 Sec11aQ9R0P6 179 aa12.58□□□□□ -0.4
Shank1-201ENSMUST00000107934 Ints1Q6P4S8 2195 aa12.58□□□□□ -0.4
Shank1-201ENSMUST00000107934 P01811 117 aa12.58□□□□□ -0.4
Shank1-201ENSMUST00000107934 AmelxP63277 210 aa12.58□□□□□ -0.4
Shank1-201ENSMUST00000107934 Tmem256Q5F285 113 aa12.58□□□□□ -0.4
Shank1-201ENSMUST00000107934 A730015C16RikQ8C992 119 aa12.58□□□□□ -0.4
Shank1-201ENSMUST00000107934 Smim10l1A0A087WNQ7 89 aa12.58□□□□□ -0.4
Shank1-201ENSMUST00000107934 Gm5089A1L3C8 106 aa12.58□□□□□ -0.4
Shank1-201ENSMUST00000107934 Gm37988J3QM41 62 aa12.58□□□□□ -0.4
Shank1-201ENSMUST00000107934 PdpnQ62011 172 aa12.58□□□□□ -0.4
Shank1-201ENSMUST00000107934 Pear1Q8VIK5 1034 aa12.58□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 32.7 ms