RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Ighv1-81A0A075B5Y4 117 aa7.75□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Gm9242J3QNY1 357 aa7.75□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 P01630 113 aa7.75□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Nkx3-1P97436 237 aa7.75□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Ubtd1Q91WB7 227 aa7.75□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Tmem219Q9D123 240 aa7.75□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Vmn1r63Q9EPT1 300 aa7.75□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Prrc2cQ3TLH4 2846 aaKnown RBP7.75□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Trav16nA0A075B634 117 aa7.75□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Ighv1-69A0A0G2JFS5 117 aa7.75□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Gm45753A0A1C7CYU8 86 aa7.75□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Fxyd7P59648 80 aa7.75□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Adam8Q05910 826 aa7.75□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Psg25Q497W1 475 aa7.75□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Tmem30bQ8BHG3 353 aa7.75□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Lyzl1Q9CPX3 148 aa7.75□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Q9CQ90 155 aa7.75□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 P01649 108 aa7.74□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Ca1P13634 261 aa7.74□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Gm12888Q3UW77 119 aa7.74□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Khdc1aQ3UWR2 166 aa7.74□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Olfr433Q7TRV9 314 aa7.74□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Fam110aQ8R184 296 aa7.74□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Plrg1Q922V4 513 aaKnown RBP7.74□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Ube2tQ9CQ37 204 aa7.74□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Tpsg1Q9QUL7 311 aa7.74□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Notch3Q61982 2318 aa7.74□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Trav12-3A0A075B648 115 aa7.74□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Saa3P04918 122 aa7.74□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 C1qtnf4Q8R066 326 aa7.74□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Smim15Q3UTD9 74 aa7.74□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Oosp2Q4FZG8 168 aa7.74□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Vsig8Q6P3A4 417 aa7.74□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Ube2v1Q9CZY3 147 aa7.74□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Necap2Q9D1J1 266 aa7.74□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Arpc1aQ9R0Q6 370 aa7.74□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Zfp950A0A0U1RQ46 609 aa7.73□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Olfr1337A2ACY8 315 aa7.73□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Gm17660B9UIU9 90 aa7.73□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Olfr235E9Q9Z6 312 aa7.73□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 CntfrO88507 372 aa7.73□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Olfr1336Q8VGH5 314 aa7.73□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 ArtnQ9Z0L2 224 aa7.73□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Trav7n-5A0A075B604 112 aa7.73□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Trav21-dv12A0A075B6C4 109 aa7.73□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Map6d1Q14BB9 191 aa7.73□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Sox21Q811W0 276 aa7.73□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Q9CX63 252 aa7.73□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Ighv1-37A0A0A6YW32 117 aa7.73□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Gm6525A0A0A6YW33 106 aa7.73□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Tmem262D3Z338 116 aa7.73□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Gm10073E9Q3T0 114 aa7.73□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 9130213A22RikQ3V3T2 120 aa7.73□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Slc35d2Q762D5 326 aa7.73□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Gm9944Q8C559 102 aa7.73□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Wipf1Q8K1I7 493 aa7.73□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Chac2Q9CQG1 178 aa7.73□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Ash1lQ99MY8 2958 aa7.73□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Sorl1O88307 2215 aaKnown RBP7.73□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 1700067P10RikG3X8U2 183 aa7.72□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Tmem95P0DJF3 176 aa7.72□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Map1lc3aQ91VR7 121 aa7.72□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 ChodlQ9CXM0 273 aa7.72□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 S100a4P07091 101 aa7.72□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 SeleQ00690 612 aa7.72□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Gm4763Q8CFJ5 196 aa7.72□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Stxbp6Q8R3T5 210 aa7.72□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Dkk2Q9QYZ8 259 aa7.72□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 B1ARW8 110 aa7.72□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Gm10188Q3V432 135 aa7.72□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 NpbQ8K4P1 119 aa7.72□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Hspb8Q9JK92 196 aa7.72□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Wisp2Q9Z0G4 251 aa7.72□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Ighv8-6A0A0A6YXA3 118 aa7.71□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 KprpB2RUR4 657 aa7.71□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Rnf5O35445 180 aa7.71□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 P01736 120 aa7.71□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Q3UNZ8 350 aa7.71□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Prickle3Q80VL3 624 aa7.71□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Ndufa2Q9CQ75 99 aa7.71□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Card19Q9D1I2 183 aa7.71□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Trav14-3A0A075B607 120 aa7.71□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Ighv6-7A0A0A6YWU3 119 aa7.71□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 PdpnQ62011 172 aa7.71□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Olfr761Q7TRJ0 323 aa7.71□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Gm5105Q8C6Y9 112 aa7.71□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Srd5a2Q99N99 254 aa7.71□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Tmem52Q9D702 196 aa7.71□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Erg28Q9ERY9 140 aa7.71□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Rab9aQ9R0M6 201 aa7.71□□□□□ -1.17
Pcdh1-201ENSMUST00000057185 Ighv1-31A0A0A6YWK5 117 aa7.71□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Khdc1cQ4KL78 166 aa7.71□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 4930474N05RikQ8BVR5 218 aa7.71□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Tax1bp3Q9DBG9 124 aa7.71□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Cd24P24807 76 aa7.71□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Ripply2Q2WG76 128 aa7.71□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 OtosQ8R448 89 aa7.71□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Dscaml1Q4VA61 2053 aa7.7□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Gm45213A0A0U1RNZ6 101 aa7.7□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Ighv3-6P18531 116 aa7.7□□□□□ -1.18
Retrieved 100 of 22,080 RNA–protein pairs in 36.1 ms