RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Smim26Q3V460 107 aa13.01□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Trav6d-4Q5R1I0 115 aa13.01□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Osr1Q9WVG7 266 aa13.01□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Sfxn3Q91V61 321 aa13□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Ankrd39Q9D2X0 183 aa13□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Igkv10-95A0A0G2JFY3 115 aa13□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Mcrip2Q9CQB2 160 aaKnown RBP13□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Immp1lQ9CQU8 166 aa13□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Gemin7Q9CWY4 129 aa13□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Mrpl32Q9DCI9 187 aaKnown RBP13□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Bdp1Q571C7 2467 aa13□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Sslp1Q3UN54 99 aa13□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Mrps36Q9CQX8 102 aa13□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Fam216aQ9DB54 251 aa13□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Igkv4-57A0A0A6YYE7 117 aa12.99□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Saxo2Q8BQB6 394 aa12.99□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Gm9881Q8BR56 211 aa12.99□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Ly6aP05533 134 aa12.99□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Id3P41133 119 aa12.99□□□□□ -0.33
Ubr3-201ENSMUST00000055758 OtorQ9JIE3 128 aa12.99□□□□□ -0.33
Ubr3-201ENSMUST00000055758 PspnO70300 156 aa12.99□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Igfbpl1Q80W15 270 aa12.99□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Tcrg-V6A0A075B5Y8 134 aa12.99□□□□□ -0.33
Ubr3-201ENSMUST00000055758 E030025P04RikA2A6V5 185 aa12.99□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Cmc4Q61908 68 aa12.99□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Lsm4Q9QXA5 137 aaKnown RBP12.99□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Trav19A0A0B4J1K4 119 aa12.99□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Igkv9-124A0A0G2JDR3 117 aa12.99□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Pate4Q09098 99 aa12.99□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Gm4744D3Z3S5 154 aa12.99□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Jpt2Q6PGH2 190 aaKnown RBP12.99□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Lynx1P0DP60 116 aa12.98□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Cdcp2Q8BQH6 427 aa12.98□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Wbp2nlQ9D529 359 aa12.98□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Siglec15A7E1W8 342 aa12.98□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Spink4O35679 86 aa12.98□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Tex36Q9D5N9 219 aa12.98□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Igkv13-84A0A140T8N3 115 aa12.98□□□□□ -0.33
Ubr3-201ENSMUST00000055758 BC048502Q80Y74 154 aa12.98□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Znf319Q9ERR8 581 aa12.98□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Reg4Q9D8G5 157 aa12.98□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Pfn2Q9JJV2 140 aa12.98□□□□□ -0.33
Ubr3-201ENSMUST00000055758 PigyP0C1P0 71 aa12.97□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Thap8E9Q695 213 aa12.97□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Klrd1O54707 179 aa12.97□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Igkv3-1A0A075B5P1 119 aa12.97□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Foxl2O88470 375 aa12.97□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Gpx1P11352 201 aa12.97□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Cox6b1P56391 86 aaKnown RBP12.97□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Cnot1Q6ZQ08 2375 aaKnown RBP12.97□□□□□ -0.33
Ubr3-201ENSMUST00000055758 P01724 129 aa12.97□□□□□ -0.33
Ubr3-201ENSMUST00000055758 P01727 129 aa12.97□□□□□ -0.33
Ubr3-201ENSMUST00000055758 GlulP15105 373 aa12.97□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Klk1b22P15948 259 aa12.97□□□□□ -0.33
Ubr3-201ENSMUST00000055758 ElnP54320 860 aa12.97□□□□□ -0.33
Ubr3-201ENSMUST00000055758 GgnQ80WJ1 673 aa12.97□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Timm23Q9WTQ8 209 aa12.97□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Gm10020E9QAZ2 204 aa12.96□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Ly6lH3BJG9 140 aa12.96□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Fgf11P70378 225 aa12.96□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Rpl15Q9CZM2 204 aaKnown RBP12.96□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Olfr748E9Q9Z0 307 aa12.96□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Mrpl14Q9D1I6 145 aa12.96□□□□□ -0.33
Ubr3-201ENSMUST00000055758 ApohQ01339 345 aa12.96□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Trav6-1A0A075B5Z8 112 aa12.96□□□□□ -0.34
Ubr3-201ENSMUST00000055758 BmperQ8CJ69 685 aa12.96□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Spaca3Q9D9X8 221 aa12.96□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Gm21789J3QMZ1 123 aa12.96□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Gm21870J3QPN2 123 aa12.96□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Gm21883J3QPV3 123 aa12.96□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Ypel2Q65Z95 119 aa12.96□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Higd1bQ99JY6 98 aa12.96□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Rnf115Q9D0C1 305 aa12.96□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Ypel1Q9ESC7 118 aa12.96□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Ccl6P27784 116 aa12.95□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Slc17a9Q8VCL5 447 aa12.95□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Tmem219Q9D123 240 aa12.95□□□□□ -0.34
Ubr3-201ENSMUST00000055758 CrebbpP45481 2441 aa12.95□□□□□ -0.34
Ubr3-201ENSMUST00000055758 RhogP84096 191 aa12.95□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Gm11232Q5SPI8 295 aa12.95□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Ociad2Q9D8W7 154 aa12.95□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Ndufs7Q9DC70 224 aa12.95□□□□□ -0.34
Ubr3-201ENSMUST00000055758 H2-DMb1P35737 261 aa12.95□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Plxna4Q80UG2 1893 aa12.95□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Tcrg-C1A0A075B5Z0 172 aa12.94□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Cspg4Q8VHY0 2327 aa12.94□□□□□ -0.34
Ubr3-201ENSMUST00000055758 4931422A03RikA2BHN9 113 aa12.94□□□□□ -0.34
Ubr3-201ENSMUST00000055758 P01634 136 aa12.94□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Sec61gP60060 68 aa12.94□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Olfr745Q7TRL9 328 aa12.94□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Gkn1Q9CR36 201 aa12.94□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Hbb-bsA8DUK4 147 aa12.94□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Pax1P09084 446 aa12.94□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Fbxl7Q5BJ29 491 aa12.94□□□□□ -0.34
Ubr3-201ENSMUST00000055758 2210407C18RikQ6YI28 220 aa12.94□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Gvin1Q80SU7 2427 aa12.94□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Zcwpw2Q08EN7 125 aa12.94□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Tmem171Q4KL18 322 aa12.94□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Rpl35aO55142 110 aa12.93□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Dopey1Q8BL99 2399 aa12.93□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 77.5 ms