RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

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Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Gosr1O88630 250 aa5.53□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Defa7P50705 93 aa5.53□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Spem1Q5F289 310 aa5.53□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Olfr1242Q8VGM6 306 aa5.53□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Tmem160Q9D938 188 aa5.53□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Spaca3Q9D9X8 221 aa5.53□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Notch1Q01705 2531 aa5.53□□□□□ -1.52
Bdnf-201ENSMUST00000053317 1500009C09RikD3YYW9 81 aa5.52□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Klrd1O54707 179 aa5.52□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Bcl6bO88282 474 aa5.52□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Fgf4P11403 202 aa5.52□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Tmem136Q3TYE7 245 aa5.52□□□□□ -1.53
Bdnf-201ENSMUST00000053317 YrdcQ3U5F4 280 aa5.52□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Gm20773A0A0A6YXW2 232 aa5.52□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Gm20807A0A0A6YXX7 232 aa5.52□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Gm37388A0A0A6YY46 143 aa5.52□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Trbv1A0A0B4J1G7 116 aa5.52□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Gm20795J3QP49 232 aa5.52□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Itgb1bp1O35671 200 aa5.52□□□□□ -1.53
Bdnf-201ENSMUST00000053317 F11rO88792 300 aa5.52□□□□□ -1.53
Bdnf-201ENSMUST00000053317 SelenotP62342 195 aa5.52□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Tmem170bP86050 132 aa5.52□□□□□ -1.53
Bdnf-201ENSMUST00000053317 AsipQ03288 131 aa5.52□□□□□ -1.53
Bdnf-201ENSMUST00000053317 SrstQ06666 185 aa5.52□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Gm21440Q3TTD8 232 aa5.52□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Psg27Q497W2 474 aa5.52□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Olfr223Q8VF69 319 aa5.52□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Chac2Q9CQG1 178 aa5.52□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Smim8Q9CQQ0 97 aa5.52□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Cd209gD3Z5D4 194 aa5.52□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Gm10521E9PZK0 135 aa5.52□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Rom1P32958 351 aa5.52□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Trav3-1Q5R1I8 114 aa5.52□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Olfr365Q8VFT2 312 aa5.52□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Olfr1195Q8VG21 308 aa5.52□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Sh3bgrl3Q91VW3 93 aa5.52□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Znf22Q9ERU3 237 aa5.52□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Hdgfl3Q9JMG7 202 aa5.52□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Cox6b1P56391 86 aaKnown RBP5.51□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Q08AU9 97 aa5.51□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Oosp2Q4FZG8 168 aa5.51□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Trav2Q5R1I9 109 aa5.51□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Bst1Q64277 311 aa5.51□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Ypel2Q65Z95 119 aa5.51□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Pef1Q8BFY6 275 aa5.51□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Saxo2Q8BQB6 394 aa5.51□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Rasl11bQ922H7 247 aa5.51□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Ypel1Q9ESC7 118 aa5.51□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Dnajc30P59041 219 aa5.51□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Rpl8P62918 257 aaKnown RBP5.51□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Znf329Q6GQR8 522 aa5.51□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Fam206aQ80ZQ9 193 aaKnown RBP5.51□□□□□ -1.53
Bdnf-201ENSMUST00000053317 A730015C16RikQ8C992 119 aa5.51□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Olfr1259Q8VEZ1 309 aa5.51□□□□□ -1.53
Bdnf-201ENSMUST00000053317 H2afb1Q9CQ70 111 aa5.51□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Ighv1-47A0A0A6YY41 117 aa5.51□□□□□ -1.53
Bdnf-201ENSMUST00000053317 H2al1jA2BFR3 109 aa5.51□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Rnase2O35291 155 aa5.51□□□□□ -1.53
Bdnf-201ENSMUST00000053317 GferP56213 198 aa5.51□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Ccl12Q62401 104 aa5.51□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Duxbl2Q7TNE6 350 aa5.51□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Olfr984Q8VFN1 314 aa5.51□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Gm17455G3UW87 128 aa5.51□□□□□ -1.53
Bdnf-201ENSMUST00000053317 PkigO70139 76 aa5.51□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Defa4P28311 92 aa5.51□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Rpl30P62889 115 aaKnown RBP5.51□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Pilrb2Q2YFS1 225 aa5.51□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Ifitm10Q8BR26 201 aa5.51□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Nabp2Q8R2Y9 212 aa5.51□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Mcrip2Q9CQB2 160 aaKnown RBP5.51□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Oxld1Q9CR10 201 aa5.51□□□□□ -1.53
Bdnf-201ENSMUST00000053317 ChtopQ9CY57 249 aaKnown RBP5.51□□□□□ -1.53
Bdnf-201ENSMUST00000053317 PigpQ9JHG1 132 aa5.51□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Rnase4Q9JJH1 148 aa5.51□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Ccl6P27784 116 aa5.5□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Cox7a2P48771 83 aa5.5□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Gm94Q3V2D2 93 aa5.5□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Olfr523Q8VFE7 317 aa5.5□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Q9D727 114 aa5.5□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Foxi3E0CZH3 425 aa5.5□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Ankrd66J3QNN4 192 aa5.5□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Wipf2Q6PEV3 440 aa5.5□□□□□ -1.53
Bdnf-201ENSMUST00000053317 EtdQ80SW5 59 aa5.5□□□□□ -1.53
Bdnf-201ENSMUST00000053317 MrapQ9D159 127 aa5.5□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Cend1Q9JKC6 149 aa5.5□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Pdzd2E9Q1M1 2796 aa5.5□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Ighv1-22A0A075B5U7 117 aa5.5□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Trav7-4A0A075B6C1 113 aa5.5□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Olfr467L7N455 308 aa5.5□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Nkx2-8O70584 235 aa5.5□□□□□ -1.53
Bdnf-201ENSMUST00000053317 P01660 111 aa5.5□□□□□ -1.53
Bdnf-201ENSMUST00000053317 P01796 113 aa5.5□□□□□ -1.53
Bdnf-201ENSMUST00000053317 P01797 113 aa5.5□□□□□ -1.53
Bdnf-201ENSMUST00000053317 P01799 113 aa5.5□□□□□ -1.53
Bdnf-201ENSMUST00000053317 P01801 115 aa5.5□□□□□ -1.53
Bdnf-201ENSMUST00000053317 P01802 115 aa5.5□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Trav7d-4Q5R1H9 113 aa5.5□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Foxf1Q61080 378 aa5.5□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Tmem230Q8CIB6 120 aa5.5□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Q8VE95 218 aa5.5□□□□□ -1.53
Retrieved 100 of 22,080 RNA–protein pairs in 47.7 ms