RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Slc25a39Q9D8K8 359 aa13.22□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Crybb3Q9JJU9 211 aa13.22□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Tmem141A2AJB2 108 aa13.21□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Cd209gD3Z5D4 194 aa13.21□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Znf239P24399 201 aa13.21□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Cd69P37217 199 aa13.21□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Gimap1P70224 277 aa13.21□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Atp5iQ06185 71 aaKnown RBP13.21□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Olfr322Q5NCC8 327 aa13.21□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Olfr317Q5NCD6 327 aa13.21□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Srsf2Q62093 221 aaKnown RBP13.21□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Ttc9cQ810A3 171 aa13.21□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Fhl4Q8CDC8 279 aa13.21□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Tmem210Q9D2F0 147 aa13.21□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Srsf6Q3TWW8 339 aaKnown RBP13.21□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Olfr904Q7TRC9 310 aa13.21□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Obox7Q4KL20 218 aa13.21□□□□□ -0.3
Ctcf-201ENSMUST00000005841 OtosQ8R448 89 aa13.21□□□□□ -0.3
Ctcf-201ENSMUST00000005841 Defa9P50707 93 aa13.2□□□□□ -0.3
Ctcf-201ENSMUST00000005841 QrfpQ8CE23 124 aa13.2□□□□□ -0.3
Ctcf-201ENSMUST00000005841 Rbp4Q00724 201 aa13.2□□□□□ -0.3
Ctcf-201ENSMUST00000005841 Hspb8Q9JK92 196 aa13.2□□□□□ -0.3
Ctcf-201ENSMUST00000005841 Igkv1-133A0A0B4J1H8 120 aa13.2□□□□□ -0.3
Ctcf-201ENSMUST00000005841 Psmg4P0C7N9 123 aa13.2□□□□□ -0.3
Ctcf-201ENSMUST00000005841 Spink13Q3UTS8 97 aa13.2□□□□□ -0.3
Ctcf-201ENSMUST00000005841 Lyg1Q9D7Q0 197 aa13.2□□□□□ -0.3
Ctcf-201ENSMUST00000005841 AcanQ61282 2132 aaKnown RBP13.19□□□□□ -0.3
Ctcf-201ENSMUST00000005841 Rln3Q8CHK2 141 aa13.19□□□□□ -0.3
Ctcf-201ENSMUST00000005841 Ttc32Q9DAC7 148 aa13.19□□□□□ -0.3
Ctcf-201ENSMUST00000005841 Vma21-psA0A140T8R2 101 aa13.19□□□□□ -0.3
Ctcf-201ENSMUST00000005841 Tmem136Q3TYE7 245 aa13.19□□□□□ -0.3
Ctcf-201ENSMUST00000005841 Dhrs13Q5SS80 376 aa13.19□□□□□ -0.3
Ctcf-201ENSMUST00000005841 Srd5a2Q99N99 254 aa13.19□□□□□ -0.3
Ctcf-201ENSMUST00000005841 Gm5819E9PZ96 154 aa13.18□□□□□ -0.3
Ctcf-201ENSMUST00000005841 Olfr898L7N1Z5 316 aa13.18□□□□□ -0.3
Ctcf-201ENSMUST00000005841 Mamld1P0C6A2 803 aa13.18□□□□□ -0.3
Ctcf-201ENSMUST00000005841 SvipQ3UZP4 77 aa13.18□□□□□ -0.3
Ctcf-201ENSMUST00000005841 Prss28Q924N9 274 aa13.18□□□□□ -0.3
Ctcf-201ENSMUST00000005841 CenpmQ9CQA0 180 aa13.18□□□□□ -0.3
Ctcf-201ENSMUST00000005841 P01756 117 aa13.18□□□□□ -0.3
Ctcf-201ENSMUST00000005841 P01757 117 aa13.18□□□□□ -0.3
Ctcf-201ENSMUST00000005841 Cox7a2P48771 83 aa13.18□□□□□ -0.3
Ctcf-201ENSMUST00000005841 Tdgf1P51865 171 aa13.18□□□□□ -0.3
Ctcf-201ENSMUST00000005841 Htr1dQ61224 374 aa13.18□□□□□ -0.3
Ctcf-201ENSMUST00000005841 RalyQ64012 312 aaKnown RBP13.18□□□□□ -0.3
Ctcf-201ENSMUST00000005841 Gm14137Q8CE97 175 aa13.18□□□□□ -0.3
Ctcf-201ENSMUST00000005841 Scnm1Q8K136 229 aa13.18□□□□□ -0.3
Ctcf-201ENSMUST00000005841 Olfr498Q8VEW2 330 aa13.18□□□□□ -0.3
Ctcf-201ENSMUST00000005841 Cacna1iE9Q7P2 2199 aa13.17□□□□□ -0.3
Ctcf-201ENSMUST00000005841 Smim1P0C8K7 78 aa13.17□□□□□ -0.3
Ctcf-201ENSMUST00000005841 Defb45Q3V490 66 aa13.17□□□□□ -0.3
Ctcf-201ENSMUST00000005841 Olfr1454Q8VFW2 307 aa13.17□□□□□ -0.3
Ctcf-201ENSMUST00000005841 Cacna1aP97445 2368 aa13.17□□□□□ -0.3
Ctcf-201ENSMUST00000005841 P01801 115 aa13.17□□□□□ -0.3
Ctcf-201ENSMUST00000005841 MycbQ6P8Z1 170 aa13.17□□□□□ -0.3
Ctcf-201ENSMUST00000005841 Fam222aQ6PGH4 453 aa13.17□□□□□ -0.3
Ctcf-201ENSMUST00000005841 Wfdc21Q8BTE6 63 aa13.17□□□□□ -0.3
Ctcf-201ENSMUST00000005841 Borcs7Q9CRC6 105 aa13.17□□□□□ -0.3
Ctcf-201ENSMUST00000005841 Map1aQ9QYR6 2776 aa13.17□□□□□ -0.3
Ctcf-201ENSMUST00000005841 Csmd2V9GX34 3611 aa13.17□□□□□ -0.3
Ctcf-201ENSMUST00000005841 Gm17660B9UIU9 90 aa13.17□□□□□ -0.3
Ctcf-201ENSMUST00000005841 E030018B13RikJ3QMS9 113 aa13.17□□□□□ -0.3
Ctcf-201ENSMUST00000005841 Col8a1Q00780 744 aa13.17□□□□□ -0.3
Ctcf-201ENSMUST00000005841 GlmpQ9JHJ3 404 aa13.17□□□□□ -0.3
Ctcf-201ENSMUST00000005841 Olfr1192-ps1A0A1L1SRD7 309 aa13.16□□□□□ -0.3
Ctcf-201ENSMUST00000005841 Gm21983D6RFS9 131 aa13.16□□□□□ -0.3
Ctcf-201ENSMUST00000005841 Gm9242J3QNY1 357 aa13.16□□□□□ -0.3
Ctcf-201ENSMUST00000005841 Cysrt1Q9D1E4 142 aa13.16□□□□□ -0.3
Ctcf-201ENSMUST00000005841 Omt2bD3YX29 119 aa13.16□□□□□ -0.3
Ctcf-201ENSMUST00000005841 Gm5426J3QNM7 103 aa13.16□□□□□ -0.3
Ctcf-201ENSMUST00000005841 Ociad1Q9CRD0 247 aaKnown RBP13.16□□□□□ -0.3
Ctcf-201ENSMUST00000005841 Ighv5-6A0A075B5Q0 117 aa13.15□□□□□ -0.3
Ctcf-201ENSMUST00000005841 7420426K07RikQ3UX66 186 aa13.15□□□□□ -0.3
Ctcf-201ENSMUST00000005841 F930015N05RikQ8C3A3 210 aa13.15□□□□□ -0.3
Ctcf-201ENSMUST00000005841 Aqp6Q8C4A0 293 aa13.15□□□□□ -0.3
Ctcf-201ENSMUST00000005841 Ly6g6dQ9Z1Q3 135 aa13.15□□□□□ -0.3
Ctcf-201ENSMUST00000005841 Gm45623A0A1B0GSF6 103 aa13.15□□□□□ -0.3
Ctcf-201ENSMUST00000005841 Asxl3Q8C4A5 2259 aa13.15□□□□□ -0.3
Ctcf-201ENSMUST00000005841 Trav14-2A0A075B694 121 aa13.15□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Pde6hP61249 83 aa13.15□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Prrx2Q06348 247 aa13.15□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Dlx1Q64317 255 aa13.15□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Gm33815A0A087WNV3 176 aa13.14□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Gm29644A0A087WPG2 191 aa13.14□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Try10Q792Z1 246 aaKnown RBP13.14□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Fam216bQ8CC14 138 aa13.14□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Stxbp6Q8R3T5 210 aa13.14□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Gm15056F6ZR08 88 aa13.14□□□□□ -0.31
Ctcf-201ENSMUST00000005841 P01748 117 aa13.14□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Olfr1209Q3SXJ3 310 aa13.14□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Gtsf1lQ9CWD0 151 aa13.14□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Tmem8bB1AWJ5 472 aa13.13□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Tal2Q62282 108 aa13.13□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Tmem89Q9DA04 169 aa13.13□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Gm12845A0A0N4SUM5 588 aa13.13□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Tmem238lA0A1B0GS74 79 aa13.13□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Lypd1Q8BLC3 141 aa13.13□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Ndufa1O35683 70 aa13.12□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Trav2Q5R1I9 109 aa13.12□□□□□ -0.31
Ctcf-201ENSMUST00000005841 9230109A22RikQ8BHE6 111 aa13.12□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 89.7 ms