RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 SETXQ7Z333 2677 aaKnown RBP11.71□□□□□ -0.54
SCARB2-223ENST00000640640 A0A1B0GW54 56 aa11.71□□□□□ -0.54
SCARB2-223ENST00000640640 BOD1L1Q8NFC6 3051 aa11.7□□□□□ -0.54
SCARB2-223ENST00000640640 CHTF8P0CG12 524 aa11.7□□□□□ -0.54
SCARB2-223ENST00000640640 LINC00476Q8WZB0 136 aa11.69□□□□□ -0.54
SCARB2-223ENST00000640640 ATMQ13315 3056 aa11.68□□□□□ -0.54
SCARB2-223ENST00000640640 UBR5O95071 2799 aaPredicted RBP11.68□□□□□ -0.54
SCARB2-223ENST00000640640 H0Y9P7 68 aa11.68□□□□□ -0.54
SCARB2-223ENST00000640640 SERTAD4-AS1Q5TG53 156 aa11.68□□□□□ -0.54
SCARB2-223ENST00000640640 FAM168BA1KXE4 195 aa11.67□□□□□ -0.54
SCARB2-223ENST00000640640 SMIM29Q86T20 159 aa11.67□□□□□ -0.54
SCARB2-223ENST00000640640 C15orf56Q8N910 161 aa11.67□□□□□ -0.54
SCARB2-223ENST00000640640 CR1P17927 2039 aa11.67□□□□□ -0.54
SCARB2-223ENST00000640640 ADGRG4Q8IZF6 3080 aa11.67□□□□□ -0.54
SCARB2-223ENST00000640640 EPM2AB3EWF7 344 aa11.67□□□□□ -0.54
SCARB2-223ENST00000640640 FREM2Q5SZK8 3169 aa11.66□□□□□ -0.54
SCARB2-223ENST00000640640 COL6A3P12111 3177 aa11.66□□□□□ -0.54
SCARB2-223ENST00000640640 PCOTHQ58A44 107 aa11.65□□□□□ -0.54
SCARB2-223ENST00000640640 CRYGAP11844 174 aa11.65□□□□□ -0.54
SCARB2-223ENST00000640640 MOBPQ13875 183 aa11.64□□□□□ -0.55
SCARB2-223ENST00000640640 LINC00528Q8N1L1 170 aa11.64□□□□□ -0.55
SCARB2-223ENST00000640640 KCNQ1DNQ9H478 68 aa11.64□□□□□ -0.55
SCARB2-223ENST00000640640 BCE1O60756 84 aa11.63□□□□□ -0.55
SCARB2-223ENST00000640640 RTL8CO15255 209 aa11.63□□□□□ -0.55
SCARB2-223ENST00000640640 A0A0U1RQV1 116 aa11.63□□□□□ -0.55
SCARB2-223ENST00000640640 A6NED7 52 aa11.61□□□□□ -0.55
SCARB2-223ENST00000640640 IGLV1-50A0A075B6I6 118 aa11.61□□□□□ -0.55
SCARB2-223ENST00000640640 DMXL2Q8TDJ6 3036 aa11.6□□□□□ -0.55
SCARB2-223ENST00000640640 COL12A1Q99715 3063 aa11.59□□□□□ -0.55
SCARB2-223ENST00000640640 PRR15LQ9BU68 103 aa11.59□□□□□ -0.55
SCARB2-223ENST00000640640 KALRNO60229 2985 aa11.59□□□□□ -0.55
SCARB2-223ENST00000640640 NBEAL2Q6ZNJ1 2754 aa11.57□□□□□ -0.56
SCARB2-223ENST00000640640 TM2D3Q9BRN9 247 aa11.57□□□□□ -0.56
SCARB2-223ENST00000640640 hDV103S1A0JD37 113 aa11.56□□□□□ -0.56
SCARB2-223ENST00000640640 RETNLBQ9BQ08 111 aa11.56□□□□□ -0.56
SCARB2-223ENST00000640640 C9orf129Q5T035 196 aaKnown RBP11.56□□□□□ -0.56
SCARB2-223ENST00000640640 C1orf64Q8NEQ6 169 aa11.56□□□□□ -0.56
SCARB2-223ENST00000640640 FAM104AQ969W3 186 aa11.56□□□□□ -0.56
SCARB2-223ENST00000640640 LIMD2Q9BT23 127 aa11.55□□□□□ -0.56
SCARB2-223ENST00000640640 TACC2O95359 2948 aa11.54□□□□□ -0.56
SCARB2-223ENST00000640640 TRBV7-4A0A0J9YYF1 115 aa11.54□□□□□ -0.56
SCARB2-223ENST00000640640 NBEAL1Q6ZS30 2694 aa11.54□□□□□ -0.56
SCARB2-223ENST00000640640 SVIPQ8NHG7 77 aa11.51□□□□□ -0.57
SCARB2-223ENST00000640640 ITPR1Q14643 2758 aa11.51□□□□□ -0.57
SCARB2-223ENST00000640640 TLX1NBP0CAT3 122 aa11.5□□□□□ -0.57
SCARB2-223ENST00000640640 SPACA4Q8TDM5 124 aa11.49□□□□□ -0.57
SCARB2-223ENST00000640640 Q8N377 158 aa11.48□□□□□ -0.57
SCARB2-223ENST00000640640 WWC2-AS2Q96NR7 200 aa11.48□□□□□ -0.57
SCARB2-223ENST00000640640 TP53AIP1Q9HCN2 124 aa11.48□□□□□ -0.57
SCARB2-223ENST00000640640 SPEGQ15772 3267 aa11.48□□□□□ -0.57
SCARB2-223ENST00000640640 RPL37AP61513 92 aaKnown RBP11.47□□□□□ -0.57
SCARB2-223ENST00000640640 CASC10Q5T4H9 136 aa11.47□□□□□ -0.57
SCARB2-223ENST00000640640 C9orf163Q8N9P6 203 aa11.46□□□□□ -0.57
SCARB2-223ENST00000640640 PSPHP1O15172 72 aa11.45□□□□□ -0.58
SCARB2-223ENST00000640640 PLA2G2DQ9UNK4 145 aa11.45□□□□□ -0.58
SCARB2-223ENST00000640640 K7ERS5 55 aa11.43□□□□□ -0.58
SCARB2-223ENST00000640640 ZZEF1O43149 2961 aa11.43□□□□□ -0.58
SCARB2-223ENST00000640640 K7EQZ3 153 aa11.43□□□□□ -0.58
SCARB2-223ENST00000640640 WIPF1O43516 503 aa11.42□□□□□ -0.58
SCARB2-223ENST00000640640 LRBAP50851 2863 aa11.42□□□□□ -0.58
SCARB2-223ENST00000640640 IGFL1Q6UW32 110 aa11.41□□□□□ -0.58
SCARB2-223ENST00000640640 EYSQ5T1H1 3165 aa11.41□□□□□ -0.58
SCARB2-223ENST00000640640 IGKV2D-30A0A075B6S6 120 aa11.41□□□□□ -0.58
SCARB2-223ENST00000640640 TRAV22A0A0B4J277 110 aa11.41□□□□□ -0.58
SCARB2-223ENST00000640640 IGKV2-30P06310 120 aa11.41□□□□□ -0.58
SCARB2-223ENST00000640640 RPS28P62857 69 aaKnown RBP11.39□□□□□ -0.59
SCARB2-223ENST00000640640 REV3LO60673 3130 aa11.39□□□□□ -0.59
SCARB2-223ENST00000640640 A0A087WTM6 91 aa11.38□□□□□ -0.59
SCARB2-223ENST00000640640 APLNQ9ULZ1 77 aa11.38□□□□□ -0.59
SCARB2-223ENST00000640640 SPINK1P00995 79 aa11.37□□□□□ -0.59
SCARB2-223ENST00000640640 TNRC18O15417 2968 aaPredicted RBP11.37□□□□□ -0.59
SCARB2-223ENST00000640640 A0A1W2PNN7 141 aa11.37□□□□□ -0.59
SCARB2-223ENST00000640640 A8MWP4 228 aa11.37□□□□□ -0.59
SCARB2-223ENST00000640640 H3BPC8 53 aa11.37□□□□□ -0.59
SCARB2-223ENST00000640640 ITPR2Q14571 2701 aa11.36□□□□□ -0.59
SCARB2-223ENST00000640640 NSD1Q96L73 2696 aaPredicted RBP11.36□□□□□ -0.59
SCARB2-223ENST00000640640 A0A0G2JQZ4 141 aa11.35□□□□□ -0.59
SCARB2-223ENST00000640640 TYMSOSQ8TAI1 123 aa11.35□□□□□ -0.59
SCARB2-223ENST00000640640 ERC2-IT1O76042 136 aa11.35□□□□□ -0.59
SCARB2-223ENST00000640640 CNBPP62633 177 aaKnown RBP11.35□□□□□ -0.59
SCARB2-223ENST00000640640 BAHCC1Q9P281 2608 aa11.35□□□□□ -0.59
SCARB2-223ENST00000640640 CFAP47Q6ZTR5 3102 aa11.34□□□□□ -0.59
SCARB2-223ENST00000640640 LINC01600Q96MT4 127 aa11.33□□□□□ -0.6
SCARB2-223ENST00000640640 LINC00313P59037 77 aa11.32□□□□□ -0.6
SCARB2-223ENST00000640640 ZNF861PO60384 105 aa11.31□□□□□ -0.6
SCARB2-223ENST00000640640 C1orf195Q5TG92 126 aa11.3□□□□□ -0.6
SCARB2-223ENST00000640640 DMXL1Q9Y485 3027 aa11.29□□□□□ -0.6
SCARB2-223ENST00000640640 PMAIP1Q13794 54 aa11.29□□□□□ -0.6
SCARB2-223ENST00000640640 A0A1W2PNM2 257 aa11.29□□□□□ -0.6
SCARB2-223ENST00000640640 OBSCN-AS1Q96MR7 158 aa11.28□□□□□ -0.6
SCARB2-223ENST00000640640 UTP20O75691 2785 aaKnown RBP11.28□□□□□ -0.6
SCARB2-223ENST00000640640 SPTBN5Q9NRC6 3674 aaKnown RBP11.28□□□□□ -0.6
SCARB2-223ENST00000640640 PRR15Q8IV56 129 aa11.27□□□□□ -0.6
SCARB2-223ENST00000640640 PLA2G1BP04054 148 aaKnown RBP11.27□□□□□ -0.61
SCARB2-223ENST00000640640 IGLV5-37A0A075B6J1 123 aa11.26□□□□□ -0.61
SCARB2-223ENST00000640640 KLKP1Q107X0 134 aa11.25□□□□□ -0.61
SCARB2-223ENST00000640640 MRPL34Q9BQ48 92 aaKnown RBP11.24□□□□□ -0.61
SCARB2-223ENST00000640640 IGLV5-48A0A075B6I7 105 aa11.24□□□□□ -0.61
SCARB2-223ENST00000640640 ACYP2P14621 99 aa11.23□□□□□ -0.61
SCARB2-223ENST00000640640 FAM229AH3BQW9 127 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms