RNA–Protein interactions for RNA: ENST00000636602.1

CLN5-212, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 3

Gene CLN5, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-212ENST00000636602 SMIM3Q9BZL3 60 aa1.27□□□□□ -2.21
CLN5-212ENST00000636602 DNHD1Q96M86 4753 aa1.26□□□□□ -2.21
CLN5-212ENST00000636602 A0A0J9YY99 117 aa1.26□□□□□ -2.21
CLN5-212ENST00000636602 CTXND1A0A1B0GTU2 59 aa1.26□□□□□ -2.21
CLN5-212ENST00000636602 IGLC2P0DOY2 106 aa1.26□□□□□ -2.21
CLN5-212ENST00000636602 UBE2L3P68036 154 aaKnown RBP1.26□□□□□ -2.21
CLN5-212ENST00000636602 OCIAD2Q56VL3 154 aa1.26□□□□□ -2.21
CLN5-212ENST00000636602 RPL7L1Q6DKI1 246 aaKnown RBP1.26□□□□□ -2.21
CLN5-212ENST00000636602 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.26□□□□□ -2.21
CLN5-212ENST00000636602 C9orf62Q8N4C0 152 aa1.26□□□□□ -2.21
CLN5-212ENST00000636602 SMIM7Q9BQ49 75 aa1.26□□□□□ -2.21
CLN5-212ENST00000636602 TCEAL7Q9BRU2 100 aa1.26□□□□□ -2.21
CLN5-212ENST00000636602 TMEM167BQ9NRX6 74 aa1.26□□□□□ -2.21
CLN5-212ENST00000636602 RPRMQ9NS64 109 aa1.26□□□□□ -2.21
CLN5-212ENST00000636602 ARL2-SNX15V9GYD0 113 aa1.26□□□□□ -2.21
CLN5-212ENST00000636602 MEGF8Q7Z7M0 2845 aa1.25□□□□□ -2.21
CLN5-212ENST00000636602 NBEAL1Q6ZS30 2694 aa1.25□□□□□ -2.21
CLN5-212ENST00000636602 IGHV1-24A0A0C4DH33 117 aa1.25□□□□□ -2.21
CLN5-212ENST00000636602 RBAKDNA6NC62 111 aa1.25□□□□□ -2.21
CLN5-212ENST00000636602 A8MTW9 85 aa1.25□□□□□ -2.21
CLN5-212ENST00000636602 F6UZH7 168 aa1.25□□□□□ -2.21
CLN5-212ENST00000636602 H3BQ15 152 aa1.25□□□□□ -2.21
CLN5-212ENST00000636602 K7EIL1 84 aa1.25□□□□□ -2.21
CLN5-212ENST00000636602 NMBP08949 121 aa1.25□□□□□ -2.21
CLN5-212ENST00000636602 PYYP10082 97 aa1.25□□□□□ -2.21
CLN5-212ENST00000636602 HLA-DRB4P13762 266 aa1.25□□□□□ -2.21
CLN5-212ENST00000636602 DEFB131AP59861 70 aa1.25□□□□□ -2.21
CLN5-212ENST00000636602 PSMG4Q5JS54 123 aa1.25□□□□□ -2.21
CLN5-212ENST00000636602 FAM213BQ8TBF2 198 aa1.25□□□□□ -2.21
CLN5-212ENST00000636602 FAM167A-AS1Q96KT0 104 aa1.25□□□□□ -2.21
CLN5-212ENST00000636602 MANBALQ9NQG1 85 aa1.25□□□□□ -2.21
CLN5-212ENST00000636602 LENEPQ9Y5L5 61 aa1.25□□□□□ -2.21
CLN5-212ENST00000636602 HLA-DRB4X5D2U9 266 aa1.25□□□□□ -2.21
CLN5-212ENST00000636602 PRKDCP78527 4128 aaKnown RBP1.25□□□□□ -2.21
CLN5-212ENST00000636602 COL7A1Q02388 2944 aa1.25□□□□□ -2.21
CLN5-212ENST00000636602 DNAH9Q9NYC9 4486 aa1.24□□□□□ -2.21
CLN5-212ENST00000636602 M0R3E3 92 aa1.24□□□□□ -2.21
CLN5-212ENST00000636602 GCHFRP30047 84 aa1.24□□□□□ -2.21
CLN5-212ENST00000636602 CKS1BP61024 79 aa1.24□□□□□ -2.21
CLN5-212ENST00000636602 UBE2G1P62253 170 aa1.24□□□□□ -2.21
CLN5-212ENST00000636602 HIST1H1AQ02539 215 aaPredicted RBP1.24□□□□□ -2.21
CLN5-212ENST00000636602 DEFB121Q5J5C9 76 aa1.24□□□□□ -2.21
CLN5-212ENST00000636602 ALKAL2Q6UX46 152 aa1.24□□□□□ -2.21
CLN5-212ENST00000636602 SBSPONQ8IVN8 264 aa1.24□□□□□ -2.21
CLN5-212ENST00000636602 HUWE1Q7Z6Z7 4374 aaKnown RBP1.24□□□□□ -2.21
CLN5-212ENST00000636602 DNAH7Q8WXX0 4024 aa1.24□□□□□ -2.21
CLN5-212ENST00000636602 MUC4Q99102 2169 aa1.24□□□□□ -2.21
CLN5-212ENST00000636602 CSMD3Q7Z407 3707 aa1.24□□□□□ -2.21
CLN5-212ENST00000636602 MGAM2Q2M2H8 2515 aa1.23□□□□□ -2.21
CLN5-212ENST00000636602 TRAV21A0A0B4J279 112 aa1.23□□□□□ -2.21
CLN5-212ENST00000636602 TRBV6-1A0A0K0K1D8 114 aa1.23□□□□□ -2.21
CLN5-212ENST00000636602 PDE6GP18545 87 aa1.23□□□□□ -2.21
CLN5-212ENST00000636602 SPINK13Q1W4C9 94 aa1.23□□□□□ -2.21
CLN5-212ENST00000636602 DEFB135Q30KP9 77 aa1.23□□□□□ -2.21
CLN5-212ENST00000636602 CLLU1Q5K131 121 aa1.23□□□□□ -2.21
CLN5-212ENST00000636602 Q6AWC8 147 aa1.23□□□□□ -2.21
CLN5-212ENST00000636602 TMEM263Q8WUH6 116 aaKnown RBP1.23□□□□□ -2.21
CLN5-212ENST00000636602 LYSTQ99698 3801 aa1.23□□□□□ -2.21
CLN5-212ENST00000636602 AGPAT4-IT1Q9H0P7 198 aa1.23□□□□□ -2.21
CLN5-212ENST00000636602 SLC35B3Q9H1N7 401 aa1.23□□□□□ -2.21
CLN5-212ENST00000636602 GNG13Q9P2W3 67 aa1.23□□□□□ -2.21
CLN5-212ENST00000636602 NOTCH1P46531 2555 aa1.23□□□□□ -2.21
CLN5-212ENST00000636602 TRAV12-3A0A0B4J271 114 aa1.22□□□□□ -2.21
CLN5-212ENST00000636602 M0R2Z0 102 aa1.22□□□□□ -2.21
CLN5-212ENST00000636602 GNG4P50150 75 aa1.22□□□□□ -2.21
CLN5-212ENST00000636602 DEFB1P60022 68 aa1.22□□□□□ -2.21
CLN5-212ENST00000636602 RPL37AP61513 92 aaKnown RBP1.22□□□□□ -2.21
CLN5-212ENST00000636602 PEA15Q15121 130 aa1.22□□□□□ -2.21
CLN5-212ENST00000636602 TDRG1Q3Y452 100 aa1.22□□□□□ -2.21
CLN5-212ENST00000636602 ASB16-AS1Q495Z4 193 aa1.22□□□□□ -2.21
CLN5-212ENST00000636602 CSAG1Q6PB30 78 aa1.22□□□□□ -2.21
CLN5-212ENST00000636602 Q86TA4 180 aa1.22□□□□□ -2.21
CLN5-212ENST00000636602 BAGE2Q86Y30 109 aa1.22□□□□□ -2.21
CLN5-212ENST00000636602 TIMM8BQ9Y5J9 83 aaPredicted RBP1.22□□□□□ -2.21
CLN5-212ENST00000636602 DYNC2H1Q8NCM8 4307 aaKnown RBP1.21□□□□□ -2.21
CLN5-212ENST00000636602 TRAV12-2A0A075B6T6 113 aa1.21□□□□□ -2.22
CLN5-212ENST00000636602 NUPR2A6NF83 97 aa1.21□□□□□ -2.22
CLN5-212ENST00000636602 ZNF727A8MUV8 499 aa1.21□□□□□ -2.22
CLN5-212ENST00000636602 F2Z2F3 143 aa1.21□□□□□ -2.22
CLN5-212ENST00000636602 SPINK4O60575 86 aa1.21□□□□□ -2.22
CLN5-212ENST00000636602 IGHV3-30P01768 117 aa1.21□□□□□ -2.22
CLN5-212ENST00000636602 SPART-AS1P0CW21 52 aa1.21□□□□□ -2.22
CLN5-212ENST00000636602 IGHV3-30-5P0DP03 117 aa1.21□□□□□ -2.22
CLN5-212ENST00000636602 HTN1P15515 57 aa1.21□□□□□ -2.22
CLN5-212ENST00000636602 ASIPP42127 132 aa1.21□□□□□ -2.22
CLN5-212ENST00000636602 LINC00575Q6W349 94 aa1.21□□□□□ -2.22
CLN5-212ENST00000636602 SEC11CQ9BY50 192 aa1.21□□□□□ -2.22
CLN5-212ENST00000636602 TGP01266 2768 aa1.2□□□□□ -2.22
CLN5-212ENST00000636602 NBEAL2Q6ZNJ1 2754 aa1.2□□□□□ -2.22
CLN5-212ENST00000636602 TENM3Q9P273 2699 aa1.2□□□□□ -2.22
CLN5-212ENST00000636602 TRGV1A0A0A0MS02 117 aa1.2□□□□□ -2.22
CLN5-212ENST00000636602 TMEM218A2RU14 115 aa1.2□□□□□ -2.22
CLN5-212ENST00000636602 H3BNG1 76 aa1.2□□□□□ -2.22
CLN5-212ENST00000636602 H3BVH4 76 aa1.2□□□□□ -2.22
CLN5-212ENST00000636602 M0R2P5 195 aa1.2□□□□□ -2.22
CLN5-212ENST00000636602 SFTA3P0C7M3 94 aa1.2□□□□□ -2.22
CLN5-212ENST00000636602 ARMS2P0C7Q2 107 aa1.2□□□□□ -2.22
CLN5-212ENST00000636602 IGLC6P0CF74 106 aa1.2□□□□□ -2.22
CLN5-212ENST00000636602 PRB4P10163 310 aaPredicted RBP1.2□□□□□ -2.22
CLN5-212ENST00000636602 CRIP1P50238 77 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms