RNA–Protein interactions for RNA: ENST00000636116.1

SYNGAP1-211, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 161 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-211ENST00000636116 M0QXV9 152 aa4.41□□□□□ -1.7
SYNGAP1-211ENST00000636116 NDUFA1O15239 70 aa4.41□□□□□ -1.7
SYNGAP1-211ENST00000636116 SMCPP49901 116 aaPredicted RBP4.41□□□□□ -1.7
SYNGAP1-211ENST00000636116 CKS1BP61024 79 aa4.41□□□□□ -1.7
SYNGAP1-211ENST00000636116 RPL39P62891 51 aaKnown RBP4.41□□□□□ -1.7
SYNGAP1-211ENST00000636116 FAM104AQ969W3 186 aa4.41□□□□□ -1.7
SYNGAP1-211ENST00000636116 SPANXA1Q9NS26 97 aa4.41□□□□□ -1.7
SYNGAP1-211ENST00000636116 SPINK8P0C7L1 97 aa4.4□□□□□ -1.71
SYNGAP1-211ENST00000636116 TLX1NBP0CAT3 122 aa4.4□□□□□ -1.71
SYNGAP1-211ENST00000636116 CFC1BP0CG36 223 aa4.4□□□□□ -1.71
SYNGAP1-211ENST00000636116 CFC1P0CG37 223 aa4.4□□□□□ -1.71
SYNGAP1-211ENST00000636116 GEMIN7Q9H840 131 aaKnown RBP4.4□□□□□ -1.71
SYNGAP1-211ENST00000636116 PYGO1Q9Y3Y4 419 aa4.4□□□□□ -1.71
SYNGAP1-211ENST00000636116 FAT4Q6V0I7 4981 aa4.39□□□□□ -1.71
SYNGAP1-211ENST00000636116 C9JAW5 83 aa4.39□□□□□ -1.71
SYNGAP1-211ENST00000636116 F8WDY8 70 aa4.39□□□□□ -1.71
SYNGAP1-211ENST00000636116 H7C2G1 150 aa4.39□□□□□ -1.71
SYNGAP1-211ENST00000636116 SLC25A20O43772 301 aa4.39□□□□□ -1.71
SYNGAP1-211ENST00000636116 ZNF861PO60384 105 aa4.39□□□□□ -1.71
SYNGAP1-211ENST00000636116 KIAA0087Q14695 138 aa4.39□□□□□ -1.71
SYNGAP1-211ENST00000636116 C9orf129Q5T035 196 aaKnown RBP4.39□□□□□ -1.71
SYNGAP1-211ENST00000636116 SFTA2Q6UW10 78 aa4.39□□□□□ -1.71
SYNGAP1-211ENST00000636116 C2orf82Q6UX34 121 aa4.39□□□□□ -1.71
SYNGAP1-211ENST00000636116 IGLV4-3A0A075B6K6 122 aa4.38□□□□□ -1.71
SYNGAP1-211ENST00000636116 A0A087X002 238 aa4.38□□□□□ -1.71
SYNGAP1-211ENST00000636116 A4D1N5 150 aa4.38□□□□□ -1.71
SYNGAP1-211ENST00000636116 SNCGO76070 127 aa4.38□□□□□ -1.71
SYNGAP1-211ENST00000636116 TCL1BO95988 128 aa4.38□□□□□ -1.71
SYNGAP1-211ENST00000636116 PRSS2P07478 247 aa4.38□□□□□ -1.71
SYNGAP1-211ENST00000636116 IFITM1P13164 125 aa4.38□□□□□ -1.71
SYNGAP1-211ENST00000636116 ZNF22P17026 224 aaPredicted RBP4.38□□□□□ -1.71
SYNGAP1-211ENST00000636116 TSPEAR-AS2P59090 65 aa4.38□□□□□ -1.71
SYNGAP1-211ENST00000636116 ANKRD29Q8N6D5 301 aa4.38□□□□□ -1.71
SYNGAP1-211ENST00000636116 RETNLBQ9BQ08 111 aa4.38□□□□□ -1.71
SYNGAP1-211ENST00000636116 ANAPC11Q9NYG5 84 aa4.38□□□□□ -1.71
SYNGAP1-211ENST00000636116 TINCRA0A1B0GVN0 87 aa4.37□□□□□ -1.71
SYNGAP1-211ENST00000636116 TIMM17BO60830 172 aa4.37□□□□□ -1.71
SYNGAP1-211ENST00000636116 MUSTN1Q8IVN3 82 aa4.37□□□□□ -1.71
SYNGAP1-211ENST00000636116 SPANXDQ9BXN6 97 aa4.37□□□□□ -1.71
SYNGAP1-211ENST00000636116 SPANXCQ9NY87 97 aa4.37□□□□□ -1.71
SYNGAP1-211ENST00000636116 NDUFA12Q9UI09 145 aa4.37□□□□□ -1.71
SYNGAP1-211ENST00000636116 A0A0J9YXY3 114 aa4.36□□□□□ -1.71
SYNGAP1-211ENST00000636116 TRBV30A0A0K0K1B3 111 aa4.36□□□□□ -1.71
SYNGAP1-211ENST00000636116 NDUFC2-KCTD14E9PQ53 114 aa4.36□□□□□ -1.71
SYNGAP1-211ENST00000636116 H3BT86 120 aa4.36□□□□□ -1.71
SYNGAP1-211ENST00000636116 MRPS36P82909 103 aaKnown RBP4.36□□□□□ -1.71
SYNGAP1-211ENST00000636116 TYMSOSQ8TAI1 123 aa4.36□□□□□ -1.71
SYNGAP1-211ENST00000636116 ANAPC13Q9BS18 74 aa4.36□□□□□ -1.71
SYNGAP1-211ENST00000636116 C22orf24Q9Y442 160 aa4.36□□□□□ -1.71
SYNGAP1-211ENST00000636116 TRBV10-2A0A0K0K1G8 114 aa4.35□□□□□ -1.71
SYNGAP1-211ENST00000636116 CRYGAP11844 174 aa4.35□□□□□ -1.71
SYNGAP1-211ENST00000636116 HERVK_113P63121 156 aa4.35□□□□□ -1.71
SYNGAP1-211ENST00000636116 LINC00242Q5T6M2 205 aa4.35□□□□□ -1.71
SYNGAP1-211ENST00000636116 AMELXQ99217 191 aa4.35□□□□□ -1.71
SYNGAP1-211ENST00000636116 XAGE1AQ9HD64 81 aa4.35□□□□□ -1.71
SYNGAP1-211ENST00000636116 KRTAP13-2Q52LG2 175 aa4.34□□□□□ -1.71
SYNGAP1-211ENST00000636116 CDIP1Q9H305 208 aa4.34□□□□□ -1.71
SYNGAP1-211ENST00000636116 TRIAP1O43715 76 aa4.33□□□□□ -1.72
SYNGAP1-211ENST00000636116 MT-ATP8P03928 68 aa4.33□□□□□ -1.72
SYNGAP1-211ENST00000636116 RPL28P46779 137 aaKnown RBP4.33□□□□□ -1.72
SYNGAP1-211ENST00000636116 TOMM7Q9P0U1 55 aa4.33□□□□□ -1.72
SYNGAP1-211ENST00000636116 FAM240AA0A1B0GVK7 77 aa4.32□□□□□ -1.72
SYNGAP1-211ENST00000636116 RPL37AP8A6NKH3 93 aa4.32□□□□□ -1.72
SYNGAP1-211ENST00000636116 BCE1O60756 84 aa4.32□□□□□ -1.72
SYNGAP1-211ENST00000636116 HERV-K104P63124 156 aa4.32□□□□□ -1.72
SYNGAP1-211ENST00000636116 C6orf226Q5I0X4 101 aa4.32□□□□□ -1.72
SYNGAP1-211ENST00000636116 MEIG1Q5JSS6 88 aa4.32□□□□□ -1.72
SYNGAP1-211ENST00000636116 IGLV7-46A0A075B6I9 117 aa4.31□□□□□ -1.72
SYNGAP1-211ENST00000636116 ACYP1P07311 99 aa4.31□□□□□ -1.72
SYNGAP1-211ENST00000636116 Q6Q795 121 aa4.31□□□□□ -1.72
SYNGAP1-211ENST00000636116 MRPL55Q7Z7F7 128 aaKnown RBP4.31□□□□□ -1.72
SYNGAP1-211ENST00000636116 LINC00167Q96N53 147 aa4.31□□□□□ -1.72
SYNGAP1-211ENST00000636116 IGLV5-45A0A087WSX0 123 aa4.3□□□□□ -1.72
SYNGAP1-211ENST00000636116 LST1O00453 97 aa4.3□□□□□ -1.72
SYNGAP1-211ENST00000636116 LCE2BO14633 110 aa4.3□□□□□ -1.72
SYNGAP1-211ENST00000636116 TPRXLQ17RH7 258 aa4.3□□□□□ -1.72
SYNGAP1-211ENST00000636116 LINC00304Q8N9R0 145 aa4.3□□□□□ -1.72
SYNGAP1-211ENST00000636116 TRAV13-2A0A0B4J235 113 aa4.29□□□□□ -1.72
SYNGAP1-211ENST00000636116 NDUFV3P56181 108 aaKnown RBP4.29□□□□□ -1.72
SYNGAP1-211ENST00000636116 NPC2P61916 151 aa4.29□□□□□ -1.72
SYNGAP1-211ENST00000636116 LINC01561Q8N1V8 128 aa4.29□□□□□ -1.72
SYNGAP1-211ENST00000636116 LINC00308Q8TCZ7 52 aa4.29□□□□□ -1.72
SYNGAP1-211ENST00000636116 LITAFQ99732 161 aa4.29□□□□□ -1.72
SYNGAP1-211ENST00000636116 PPDPFQ9H3Y8 114 aa4.29□□□□□ -1.72
SYNGAP1-211ENST00000636116 TEX49A0A1B0GTD5 131 aa4.28□□□□□ -1.72
SYNGAP1-211ENST00000636116 DNAL4O96015 105 aa4.28□□□□□ -1.72
SYNGAP1-211ENST00000636116 TRACP01848 142 aa4.28□□□□□ -1.72
SYNGAP1-211ENST00000636116 UBE2AP49459 152 aa4.28□□□□□ -1.72
SYNGAP1-211ENST00000636116 ADAMTSL4-AS1Q5T5F5 129 aa4.28□□□□□ -1.72
SYNGAP1-211ENST00000636116 KRTAP13-1Q8IUC0 172 aa4.28□□□□□ -1.72
SYNGAP1-211ENST00000636116 Q8IZM0 81 aa4.28□□□□□ -1.72
SYNGAP1-211ENST00000636116 CLEC2BQ92478 149 aa4.28□□□□□ -1.72
SYNGAP1-211ENST00000636116 CDKN2A-AS1Q9UH64 79 aa4.28□□□□□ -1.72
SYNGAP1-211ENST00000636116 MUC17Q685J3 4493 aa4.28□□□□□ -1.72
SYNGAP1-211ENST00000636116 IGLV5-39A0A0G2JS06 123 aa4.27□□□□□ -1.73
SYNGAP1-211ENST00000636116 FAM229BQ4G0N7 80 aa4.27□□□□□ -1.73
SYNGAP1-211ENST00000636116 FAM19A3Q7Z5A8 133 aa4.27□□□□□ -1.73
SYNGAP1-211ENST00000636116 CRCT1Q9UGL9 99 aa4.27□□□□□ -1.73
SYNGAP1-211ENST00000636116 EIF4EBP3O60516 100 aaPredicted RBP4.26□□□□□ -1.73
SYNGAP1-211ENST00000636116 C3orf22Q8N5N4 141 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms