RNA–Protein interactions for RNA: ENST00000635590.1

SMARCA2-243, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 1,843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-243ENST00000635590 LINC00467Q9BRT7 94 aa4.64□□□□□ -1.67
SMARCA2-243ENST00000635590 NDUFA1O15239 70 aa4.63□□□□□ -1.67
SMARCA2-243ENST00000635590 IGHV3-53P01767 116 aa4.63□□□□□ -1.67
SMARCA2-243ENST00000635590 NPC2P61916 151 aa4.63□□□□□ -1.67
SMARCA2-243ENST00000635590 DYNLRB2Q8TF09 96 aa4.63□□□□□ -1.67
SMARCA2-243ENST00000635590 SVEP1Q4LDE5 3571 aa4.63□□□□□ -1.67
SMARCA2-243ENST00000635590 TEX49A0A1B0GTD5 131 aa4.62□□□□□ -1.67
SMARCA2-243ENST00000635590 FAM229BQ4G0N7 80 aa4.62□□□□□ -1.67
SMARCA2-243ENST00000635590 LCE1DQ5T752 114 aa4.62□□□□□ -1.67
SMARCA2-243ENST00000635590 MUC7Q8TAX7 377 aa4.62□□□□□ -1.67
SMARCA2-243ENST00000635590 NOTCH1P46531 2555 aa4.62□□□□□ -1.67
SMARCA2-243ENST00000635590 NACAE9PAV3 2078 aa4.62□□□□□ -1.67
SMARCA2-243ENST00000635590 C16orf90A8MZG2 172 aa4.62□□□□□ -1.67
SMARCA2-243ENST00000635590 TMEM256-PLSCR3K7ERE1 68 aa4.61□□□□□ -1.67
SMARCA2-243ENST00000635590 HIST1H4AP62805 103 aaKnown RBP4.61□□□□□ -1.67
SMARCA2-243ENST00000635590 DEFB136Q30KP8 78 aa4.61□□□□□ -1.67
SMARCA2-243ENST00000635590 Q5XG85 94 aa4.61□□□□□ -1.67
SMARCA2-243ENST00000635590 C15orf53Q8NAA6 179 aa4.61□□□□□ -1.67
SMARCA2-243ENST00000635590 SMCR5Q8TEV8 140 aa4.61□□□□□ -1.67
SMARCA2-243ENST00000635590 CLEC2BQ92478 149 aa4.61□□□□□ -1.67
SMARCA2-243ENST00000635590 CDKN2A-AS1Q9UH64 79 aa4.61□□□□□ -1.67
SMARCA2-243ENST00000635590 LCE1AQ5T7P2 110 aa4.6□□□□□ -1.67
SMARCA2-243ENST00000635590 C4orf3Q8WVX3 66 aa4.6□□□□□ -1.67
SMARCA2-243ENST00000635590 DEFB121Q5J5C9 76 aa4.6□□□□□ -1.67
SMARCA2-243ENST00000635590 LINC00308Q8TCZ7 52 aa4.6□□□□□ -1.67
SMARCA2-243ENST00000635590 KRTAP4-9Q9BYQ8 210 aa4.6□□□□□ -1.67
SMARCA2-243ENST00000635590 TRBV10-1A0A0K0K1A3 114 aa4.59□□□□□ -1.67
SMARCA2-243ENST00000635590 MEIG1Q5JSS6 88 aa4.59□□□□□ -1.67
SMARCA2-243ENST00000635590 TRGV1A0A0A0MS02 117 aa4.58□□□□□ -1.68
SMARCA2-243ENST00000635590 ACYP1P07311 99 aa4.58□□□□□ -1.68
SMARCA2-243ENST00000635590 Q8N2B8 174 aa4.58□□□□□ -1.68
SMARCA2-243ENST00000635590 VWFP04275 2813 aa4.58□□□□□ -1.68
SMARCA2-243ENST00000635590 TRRAPQ9Y4A5 3859 aa4.58□□□□□ -1.68
SMARCA2-243ENST00000635590 UBE2BP63146 152 aa4.58□□□□□ -1.68
SMARCA2-243ENST00000635590 COX6A2Q02221 97 aa4.58□□□□□ -1.68
SMARCA2-243ENST00000635590 DEFB114Q30KQ6 69 aa4.58□□□□□ -1.68
SMARCA2-243ENST00000635590 TRAV13-1A0A0B4J241 112 aa4.57□□□□□ -1.68
SMARCA2-243ENST00000635590 TRACP01848 142 aa4.57□□□□□ -1.68
SMARCA2-243ENST00000635590 LINC00483Q53H64 154 aa4.57□□□□□ -1.68
SMARCA2-243ENST00000635590 ZNF625Q96I27 306 aaPredicted RBP4.57□□□□□ -1.68
SMARCA2-243ENST00000635590 NBEAL2Q6ZNJ1 2754 aa4.56□□□□□ -1.68
SMARCA2-243ENST00000635590 TRBV7-7A0A0K0K1E9 115 aa4.56□□□□□ -1.68
SMARCA2-243ENST00000635590 TRAV13-2A0A0B4J235 113 aa4.56□□□□□ -1.68
SMARCA2-243ENST00000635590 CRPP02741 224 aa4.56□□□□□ -1.68
SMARCA2-243ENST00000635590 LINC00694P0DN24 101 aa4.56□□□□□ -1.68
SMARCA2-243ENST00000635590 XCL1P47992 114 aa4.56□□□□□ -1.68
SMARCA2-243ENST00000635590 PRKDCP78527 4128 aaKnown RBP4.55□□□□□ -1.68
SMARCA2-243ENST00000635590 LOC107984640A0A0U1RRK4 108 aa4.55□□□□□ -1.68
SMARCA2-243ENST00000635590 CCDC179H3BU77 68 aa4.55□□□□□ -1.68
SMARCA2-243ENST00000635590 SOSTDC1Q6X4U4 206 aa4.55□□□□□ -1.68
SMARCA2-243ENST00000635590 C1orf64Q8NEQ6 169 aa4.55□□□□□ -1.68
SMARCA2-243ENST00000635590 CDC42SE2Q9NRR3 84 aa4.55□□□□□ -1.68
SMARCA2-243ENST00000635590 Q6ZTI0 123 aa4.54□□□□□ -1.68
SMARCA2-243ENST00000635590 SORL1Q92673 2214 aa4.54□□□□□ -1.68
SMARCA2-243ENST00000635590 BAALC-AS2P0C853 105 aa4.53□□□□□ -1.68
SMARCA2-243ENST00000635590 LINC00643Q86TS7 51 aa4.53□□□□□ -1.68
SMARCA2-243ENST00000635590 COX7B2Q8TF08 81 aa4.53□□□□□ -1.68
SMARCA2-243ENST00000635590 WNK1Q9H4A3 2382 aa4.53□□□□□ -1.68
SMARCA2-243ENST00000635590 TRGV2A0A075B6R0 118 aa4.53□□□□□ -1.68
SMARCA2-243ENST00000635590 DNAL4O96015 105 aa4.53□□□□□ -1.68
SMARCA2-243ENST00000635590 RPL28P46779 137 aaKnown RBP4.53□□□□□ -1.68
SMARCA2-243ENST00000635590 NOP10Q9NPE3 64 aaKnown RBP4.53□□□□□ -1.68
SMARCA2-243ENST00000635590 TRBV7-6A0A0J9YX20 115 aa4.52□□□□□ -1.69
SMARCA2-243ENST00000635590 FAM236AA0A1B0GUQ0 79 aa4.52□□□□□ -1.69
SMARCA2-243ENST00000635590 FAM236BA0A1B0GV22 79 aa4.52□□□□□ -1.69
SMARCA2-243ENST00000635590 MT3P25713 68 aa4.52□□□□□ -1.69
SMARCA2-243ENST00000635590 KRTAP10-11P60412 298 aa4.52□□□□□ -1.69
SMARCA2-243ENST00000635590 KPRPQ5T749 579 aaPredicted RBP4.52□□□□□ -1.69
SMARCA2-243ENST00000635590 TRGV4A0A0C4DH28 118 aa4.51□□□□□ -1.69
SMARCA2-243ENST00000635590 TRBV6-4A0A1B0GX49 114 aa4.51□□□□□ -1.69
SMARCA2-243ENST00000635590 LINC00158P58513 81 aa4.51□□□□□ -1.69
SMARCA2-243ENST00000635590 PHF5AQ7RTV0 110 aaKnown RBP4.51□□□□□ -1.69
SMARCA2-243ENST00000635590 Q8NAQ8 132 aa4.51□□□□□ -1.69
SMARCA2-243ENST00000635590 TOMM7Q9P0U1 55 aa4.51□□□□□ -1.69
SMARCA2-243ENST00000635590 CMYA5Q8N3K9 4069 aa4.5□□□□□ -1.69
SMARCA2-243ENST00000635590 IGKV3OR2-268A0A0C4DH90 116 aa4.5□□□□□ -1.69
SMARCA2-243ENST00000635590 IBA57-AS1B1ANH7 110 aa4.5□□□□□ -1.69
SMARCA2-243ENST00000635590 H0YGX0 51 aa4.5□□□□□ -1.69
SMARCA2-243ENST00000635590 BRK1Q8WUW1 75 aa4.5□□□□□ -1.69
SMARCA2-243ENST00000635590 C3orf84H3BNL1 204 aa4.49□□□□□ -1.69
SMARCA2-243ENST00000635590 DNAH10OSP0CZ25 163 aa4.49□□□□□ -1.69
SMARCA2-243ENST00000635590 KMT2CQ8NEZ4 4911 aaKnown RBP4.49□□□□□ -1.69
SMARCA2-243ENST00000635590 IGKV2-28A0A075B6P5 120 aa4.49□□□□□ -1.69
SMARCA2-243ENST00000635590 TRBV6-8A0A0A6YYG3 113 aa4.49□□□□□ -1.69
SMARCA2-243ENST00000635590 A0A1B0GU33 70 aa4.49□□□□□ -1.69
SMARCA2-243ENST00000635590 H3BPC8 53 aa4.49□□□□□ -1.69
SMARCA2-243ENST00000635590 IGKV2D-28P01615 120 aa4.49□□□□□ -1.69
SMARCA2-243ENST00000635590 SMIM11BQ8TCY0 68 aa4.49□□□□□ -1.69
SMARCA2-243ENST00000635590 CCL18P55774 89 aa4.48□□□□□ -1.69
SMARCA2-243ENST00000635590 Q8NDZ9 215 aa4.48□□□□□ -1.69
SMARCA2-243ENST00000635590 C22orf24Q9Y442 160 aa4.48□□□□□ -1.69
SMARCA2-243ENST00000635590 IGLV4-60A0A075B6I1 120 aa4.47□□□□□ -1.69
SMARCA2-243ENST00000635590 UQCRQO14949 82 aa4.47□□□□□ -1.69
SMARCA2-243ENST00000635590 C9orf153Q5TBE3 101 aa4.47□□□□□ -1.69
SMARCA2-243ENST00000635590 C5orf38Q86SI9 138 aa4.47□□□□□ -1.69
SMARCA2-243ENST00000635590 RYR3Q15413 4870 aa4.47□□□□□ -1.69
SMARCA2-243ENST00000635590 ATOX1O00244 68 aa4.46□□□□□ -1.69
SMARCA2-243ENST00000635590 SS18Q15532 418 aa4.46□□□□□ -1.69
SMARCA2-243ENST00000635590 KRTAP25-1Q3LHN0 102 aa4.46□□□□□ -1.69
SMARCA2-243ENST00000635590 LINC00959A0A1B0GUT2 108 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms