RNA–Protein interactions for RNA: ENST00000626847.2

SMN2-214, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-214ENST00000626847 RPL39P62891 51 aaKnown RBP5.59□□□□□ -1.51
SMN2-214ENST00000626847 ARFGEF3Q5TH69 2177 aa5.59□□□□□ -1.51
SMN2-214ENST00000626847 IGHV3-49A0A0A0MS15 119 aa5.58□□□□□ -1.52
SMN2-214ENST00000626847 CNBPP62633 177 aaKnown RBP5.58□□□□□ -1.52
SMN2-214ENST00000626847 NTM-AS1Q6ZSK4 140 aa5.58□□□□□ -1.52
SMN2-214ENST00000626847 IGHV4-61A0A0C4DH41 118 aa5.57□□□□□ -1.52
SMN2-214ENST00000626847 RNASE13Q5GAN3 156 aaKnown RBP5.57□□□□□ -1.52
SMN2-214ENST00000626847 C9orf47Q6ZRZ4 202 aa5.57□□□□□ -1.52
SMN2-214ENST00000626847 PLAC8Q9NZF1 115 aa5.57□□□□□ -1.52
SMN2-214ENST00000626847 NOTCH3Q9UM47 2321 aa5.57□□□□□ -1.52
SMN2-214ENST00000626847 TENM3Q9P273 2699 aa5.57□□□□□ -1.52
SMN2-214ENST00000626847 DNAH1Q9P2D7 4330 aa5.57□□□□□ -1.52
SMN2-214ENST00000626847 ETDCA0A1B0GVM5 59 aa5.57□□□□□ -1.52
SMN2-214ENST00000626847 CGB3P0DN86 165 aa5.57□□□□□ -1.52
SMN2-214ENST00000626847 CGB7P0DN87 165 aa5.57□□□□□ -1.52
SMN2-214ENST00000626847 CNEP1R1Q8N9A8 125 aa5.57□□□□□ -1.52
SMN2-214ENST00000626847 SND1-IT1Q9HBX3 110 aa5.57□□□□□ -1.52
SMN2-214ENST00000626847 IGHV3-35A0A0C4DH35 117 aa5.55□□□□□ -1.52
SMN2-214ENST00000626847 IGHV3-38A0A0C4DH36 116 aa5.55□□□□□ -1.52
SMN2-214ENST00000626847 IGKV4-1P06312 121 aa5.55□□□□□ -1.52
SMN2-214ENST00000626847 Q8TAT8 98 aa5.55□□□□□ -1.52
SMN2-214ENST00000626847 PRAC1Q96KF2 57 aa5.55□□□□□ -1.52
SMN2-214ENST00000626847 WFDC10AQ9H1F0 79 aa5.55□□□□□ -1.52
SMN2-214ENST00000626847 RTL8CO15255 209 aa5.54□□□□□ -1.52
SMN2-214ENST00000626847 IGKV1-17P01599 117 aa5.54□□□□□ -1.52
SMN2-214ENST00000626847 PRB2P02812 416 aaPredicted RBP5.54□□□□□ -1.52
SMN2-214ENST00000626847 C1orf134Q5TEV5 83 aa5.54□□□□□ -1.52
SMN2-214ENST00000626847 COX7B2Q8TF08 81 aa5.54□□□□□ -1.52
SMN2-214ENST00000626847 DNAH9Q9NYC9 4486 aa5.53□□□□□ -1.52
SMN2-214ENST00000626847 IGKV3D-15A0A087WSY6 115 aa5.53□□□□□ -1.52
SMN2-214ENST00000626847 KRTAP16-1A8MUX0 517 aa5.53□□□□□ -1.52
SMN2-214ENST00000626847 B4DSR2 109 aa5.53□□□□□ -1.52
SMN2-214ENST00000626847 I3L2K1 104 aa5.53□□□□□ -1.52
SMN2-214ENST00000626847 NDUFA4O00483 81 aa5.53□□□□□ -1.52
SMN2-214ENST00000626847 LINC00315P59091 139 aa5.53□□□□□ -1.52
SMN2-214ENST00000626847 ROMO1P60602 79 aa5.53□□□□□ -1.52
SMN2-214ENST00000626847 Q6ZTI0 123 aa5.53□□□□□ -1.52
SMN2-214ENST00000626847 TENM2Q9NT68 2774 aa5.53□□□□□ -1.52
SMN2-214ENST00000626847 DSCAML1Q8TD84 2053 aa5.53□□□□□ -1.52
SMN2-214ENST00000626847 TRGV2A0A075B6R0 118 aa5.52□□□□□ -1.53
SMN2-214ENST00000626847 K7EQD1 137 aa5.52□□□□□ -1.53
SMN2-214ENST00000626847 IGHV3-53P01767 116 aa5.52□□□□□ -1.53
SMN2-214ENST00000626847 ZNF580Q9UK33 172 aa5.52□□□□□ -1.53
SMN2-214ENST00000626847 ARHGAP32A7KAX9 2087 aa5.52□□□□□ -1.53
SMN2-214ENST00000626847 KIAA1109Q2LD37 5005 aa5.52□□□□□ -1.53
SMN2-214ENST00000626847 PLXNB1O43157 2135 aa5.52□□□□□ -1.53
SMN2-214ENST00000626847 PLCE1Q9P212 2302 aa5.51□□□□□ -1.53
SMN2-214ENST00000626847 IGKV2-28A0A075B6P5 120 aa5.5□□□□□ -1.53
SMN2-214ENST00000626847 IGHV3OR16-8A0A075B7F1 116 aa5.5□□□□□ -1.53
SMN2-214ENST00000626847 IGKV2D-28P01615 120 aa5.5□□□□□ -1.53
SMN2-214ENST00000626847 IGHV3-48P01763 117 aa5.5□□□□□ -1.53
SMN2-214ENST00000626847 IGHV4-38-2P0DP08 117 aa5.5□□□□□ -1.53
SMN2-214ENST00000626847 KPRPQ5T749 579 aaPredicted RBP5.5□□□□□ -1.53
SMN2-214ENST00000626847 KCNQ1DNQ9H478 68 aa5.5□□□□□ -1.53
SMN2-214ENST00000626847 DNAH3Q8TD57 4116 aa5.5□□□□□ -1.53
SMN2-214ENST00000626847 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.49□□□□□ -1.53
SMN2-214ENST00000626847 IGHV3OR16-12A0A075B7B8 117 aa5.49□□□□□ -1.53
SMN2-214ENST00000626847 IGHV1-3A0A0C4DH29 117 aa5.49□□□□□ -1.53
SMN2-214ENST00000626847 TRBV6-4A0A1B0GX49 114 aa5.49□□□□□ -1.53
SMN2-214ENST00000626847 ATP6V0E1O15342 81 aa5.49□□□□□ -1.53
SMN2-214ENST00000626847 TFF1P04155 84 aa5.49□□□□□ -1.53
SMN2-214ENST00000626847 MSMBP08118 114 aa5.49□□□□□ -1.53
SMN2-214ENST00000626847 REG3AQ06141 175 aa5.49□□□□□ -1.53
SMN2-214ENST00000626847 SPAG11BQ08648 103 aa5.49□□□□□ -1.53
SMN2-214ENST00000626847 C17orf58Q2M2W7 97 aa5.49□□□□□ -1.53
SMN2-214ENST00000626847 SPAG11AQ6PDA7 123 aa5.49□□□□□ -1.53
SMN2-214ENST00000626847 MUC7Q8TAX7 377 aa5.49□□□□□ -1.53
SMN2-214ENST00000626847 GAFA1Q96PS6 74 aa5.49□□□□□ -1.53
SMN2-214ENST00000626847 RNF5Q99942 180 aa5.49□□□□□ -1.53
SMN2-214ENST00000626847 IGHV3-15A0A0B4J1V0 119 aa5.48□□□□□ -1.53
SMN2-214ENST00000626847 IGKV3-15P01624 115 aa5.48□□□□□ -1.53
SMN2-214ENST00000626847 ZFAND2AQ8N6M9 145 aa5.48□□□□□ -1.53
SMN2-214ENST00000626847 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.48□□□□□ -1.53
SMN2-214ENST00000626847 M0QY20 66 aa5.48□□□□□ -1.53
SMN2-214ENST00000626847 IGLV2-23P01705 113 aa5.48□□□□□ -1.53
SMN2-214ENST00000626847 COX7BP24311 80 aa5.48□□□□□ -1.53
SMN2-214ENST00000626847 Q8NAQ8 132 aa5.48□□□□□ -1.53
SMN2-214ENST00000626847 LEAP2Q969E1 77 aa5.48□□□□□ -1.53
SMN2-214ENST00000626847 FAM104AQ969W3 186 aa5.48□□□□□ -1.53
SMN2-214ENST00000626847 COL7A1Q02388 2944 aa5.47□□□□□ -1.53
SMN2-214ENST00000626847 A0A1W2PNM2 257 aa5.46□□□□□ -1.54
SMN2-214ENST00000626847 H0Y9P7 68 aa5.46□□□□□ -1.54
SMN2-214ENST00000626847 IGHV1-8P0DP01 117 aa5.46□□□□□ -1.54
SMN2-214ENST00000626847 CDKN2A-AS1Q9UH64 79 aa5.46□□□□□ -1.54
SMN2-214ENST00000626847 IGLV4-60A0A075B6I1 120 aa5.45□□□□□ -1.54
SMN2-214ENST00000626847 MRPL33O75394 65 aaKnown RBP5.45□□□□□ -1.54
SMN2-214ENST00000626847 IGKV2-30P06310 120 aa5.45□□□□□ -1.54
SMN2-214ENST00000626847 LYSTQ99698 3801 aa5.44□□□□□ -1.54
SMN2-214ENST00000626847 K7EIM0 57 aa5.44□□□□□ -1.54
SMN2-214ENST00000626847 IGHV1-2P23083 117 aa5.44□□□□□ -1.54
SMN2-214ENST00000626847 LINC00575Q6W349 94 aa5.44□□□□□ -1.54
SMN2-214ENST00000626847 IGLV9-49A0A0B4J1Y8 123 aa5.43□□□□□ -1.54
SMN2-214ENST00000626847 SMIM1B2RUZ4 78 aa5.43□□□□□ -1.54
SMN2-214ENST00000626847 SRRM5B3KS81 715 aa5.43□□□□□ -1.54
SMN2-214ENST00000626847 IGHV4-59P01825 116 aa5.43□□□□□ -1.54
SMN2-214ENST00000626847 RNASE3P12724 160 aaKnown RBP5.43□□□□□ -1.54
SMN2-214ENST00000626847 KRTAP10-3P60369 221 aa5.43□□□□□ -1.54
SMN2-214ENST00000626847 A0A087WSZ3 146 aa5.42□□□□□ -1.54
SMN2-214ENST00000626847 IGHV3-21A0A0B4J1V1 117 aa5.42□□□□□ -1.54
SMN2-214ENST00000626847 CCL18P55774 89 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms