RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 SPINK1P00995 79 aa5.67□□□□□ -1.5
PTPDC1-204ENST00000620992 MRPL55Q7Z7F7 128 aaKnown RBP5.67□□□□□ -1.5
PTPDC1-204ENST00000620992 LINC00474Q9P2X8 69 aa5.67□□□□□ -1.5
PTPDC1-204ENST00000620992 TMEM258P61165 79 aa5.66□□□□□ -1.5
PTPDC1-204ENST00000620992 SPTSSBQ8NFR3 76 aa5.66□□□□□ -1.5
PTPDC1-204ENST00000620992 SPACA4Q8TDM5 124 aa5.66□□□□□ -1.5
PTPDC1-204ENST00000620992 SMCR5Q8TEV8 140 aa5.66□□□□□ -1.5
PTPDC1-204ENST00000620992 AKAP9Q99996 3911 aa5.66□□□□□ -1.5
PTPDC1-204ENST00000620992 C19orf73Q9NVV2 129 aa5.66□□□□□ -1.5
PTPDC1-204ENST00000620992 C16orf90A8MZG2 172 aa5.65□□□□□ -1.5
PTPDC1-204ENST00000620992 CSNK1G2-AS1Q8NCQ2 148 aa5.65□□□□□ -1.5
PTPDC1-204ENST00000620992 MUC7Q8TAX7 377 aa5.65□□□□□ -1.5
PTPDC1-204ENST00000620992 C2orf48Q96LS8 159 aa5.65□□□□□ -1.5
PTPDC1-204ENST00000620992 Q8N9L7 120 aa5.65□□□□□ -1.5
PTPDC1-204ENST00000620992 Q9BRP9 147 aa5.65□□□□□ -1.5
PTPDC1-204ENST00000620992 C22orf24Q9Y442 160 aa5.65□□□□□ -1.5
PTPDC1-204ENST00000620992 DNAH10OSP0CZ25 163 aa5.64□□□□□ -1.51
PTPDC1-204ENST00000620992 LINC01547P58512 204 aaPredicted RBP5.64□□□□□ -1.51
PTPDC1-204ENST00000620992 J3KT08 172 aa5.64□□□□□ -1.51
PTPDC1-204ENST00000620992 SMR3BP02814 79 aaPredicted RBP5.64□□□□□ -1.51
PTPDC1-204ENST00000620992 TRBV7-7A0A0K0K1E9 115 aa5.64□□□□□ -1.51
PTPDC1-204ENST00000620992 SEC61GP60059 68 aa5.64□□□□□ -1.51
PTPDC1-204ENST00000620992 ZNF706Q9Y5V0 76 aaPredicted RBP5.64□□□□□ -1.51
PTPDC1-204ENST00000620992 LINC00588Q9Y4M8 146 aa5.63□□□□□ -1.51
PTPDC1-204ENST00000620992 A0A1B0GUV1 79 aa5.63□□□□□ -1.51
PTPDC1-204ENST00000620992 K7EIL1 84 aa5.63□□□□□ -1.51
PTPDC1-204ENST00000620992 C9orf129Q5T035 196 aaKnown RBP5.63□□□□□ -1.51
PTPDC1-204ENST00000620992 H3BQ85 93 aa5.63□□□□□ -1.51
PTPDC1-204ENST00000620992 COX17Q14061 63 aa5.63□□□□□ -1.51
PTPDC1-204ENST00000620992 PCOTHQ58A44 107 aa5.62□□□□□ -1.51
PTPDC1-204ENST00000620992 PHF5AQ7RTV0 110 aaKnown RBP5.62□□□□□ -1.51
PTPDC1-204ENST00000620992 Q8N814 137 aa5.62□□□□□ -1.51
PTPDC1-204ENST00000620992 LINC00575Q6W349 94 aa5.62□□□□□ -1.51
PTPDC1-204ENST00000620992 Q8NAQ8 132 aa5.62□□□□□ -1.51
PTPDC1-204ENST00000620992 LINC00208Q96KT6 92 aa5.62□□□□□ -1.51
PTPDC1-204ENST00000620992 KRTAP10-11P60412 298 aa5.61□□□□□ -1.51
PTPDC1-204ENST00000620992 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.61□□□□□ -1.51
PTPDC1-204ENST00000620992 SPATA3Q8NHX4 192 aa5.61□□□□□ -1.51
PTPDC1-204ENST00000620992 LINC00167Q96N53 147 aa5.61□□□□□ -1.51
PTPDC1-204ENST00000620992 Q6ZVQ6 151 aa5.6□□□□□ -1.51
PTPDC1-204ENST00000620992 IMUPQ9GZP8 106 aa5.6□□□□□ -1.51
PTPDC1-204ENST00000620992 KRTAP10-3P60369 221 aa5.6□□□□□ -1.51
PTPDC1-204ENST00000620992 C6orf48Q9UBA6 75 aa5.6□□□□□ -1.51
PTPDC1-204ENST00000620992 MOBPQ13875 183 aa5.6□□□□□ -1.51
PTPDC1-204ENST00000620992 KRTAP1-1Q07627 177 aa5.59□□□□□ -1.51
PTPDC1-204ENST00000620992 NBDYA0A0U1RRE5 68 aa5.59□□□□□ -1.51
PTPDC1-204ENST00000620992 BRK1Q8WUW1 75 aa5.59□□□□□ -1.52
PTPDC1-204ENST00000620992 LINC00846Q9NV44 126 aa5.59□□□□□ -1.52
PTPDC1-204ENST00000620992 WWC2-AS2Q96NR7 200 aa5.58□□□□□ -1.52
PTPDC1-204ENST00000620992 A0A0U1RQV1 116 aa5.58□□□□□ -1.52
PTPDC1-204ENST00000620992 UQCRQO14949 82 aa5.58□□□□□ -1.52
PTPDC1-204ENST00000620992 VWFP04275 2813 aa5.58□□□□□ -1.52
PTPDC1-204ENST00000620992 IGKV2D-30A0A075B6S6 120 aa5.58□□□□□ -1.52
PTPDC1-204ENST00000620992 IGKV2-30P06310 120 aa5.58□□□□□ -1.52
PTPDC1-204ENST00000620992 FAM236DA0A1B0GTK5 79 aa5.57□□□□□ -1.52
PTPDC1-204ENST00000620992 FAM236CP0DP71 79 aa5.57□□□□□ -1.52
PTPDC1-204ENST00000620992 FAM168BA1KXE4 195 aa5.57□□□□□ -1.52
PTPDC1-204ENST00000620992 RTL8CO15255 209 aa5.57□□□□□ -1.52
PTPDC1-204ENST00000620992 KIAA0087Q14695 138 aa5.56□□□□□ -1.52
PTPDC1-204ENST00000620992 ST20-AS1Q8NBB2 130 aa5.56□□□□□ -1.52
PTPDC1-204ENST00000620992 LINC00612Q8N6U2 182 aa5.54□□□□□ -1.52
PTPDC1-204ENST00000620992 PDZD2O15018 2839 aa5.54□□□□□ -1.52
PTPDC1-204ENST00000620992 FAM229AH3BQW9 127 aa5.54□□□□□ -1.52
PTPDC1-204ENST00000620992 ANAPC11Q9NYG5 84 aa5.54□□□□□ -1.52
PTPDC1-204ENST00000620992 A0A0G2JQZ4 141 aa5.53□□□□□ -1.52
PTPDC1-204ENST00000620992 A0A1W2PNN7 141 aa5.53□□□□□ -1.52
PTPDC1-204ENST00000620992 COX7CP15954 63 aa5.53□□□□□ -1.52
PTPDC1-204ENST00000620992 Q6JHZ5 121 aa5.52□□□□□ -1.53
PTPDC1-204ENST00000620992 TENM1Q9UKZ4 2725 aa5.52□□□□□ -1.53
PTPDC1-204ENST00000620992 J3QL48 77 aa5.51□□□□□ -1.53
PTPDC1-204ENST00000620992 Q6ZRP5 223 aa5.51□□□□□ -1.53
PTPDC1-204ENST00000620992 NDUFC2O95298 119 aa5.51□□□□□ -1.53
PTPDC1-204ENST00000620992 LINC01561Q8N1V8 128 aa5.51□□□□□ -1.53
PTPDC1-204ENST00000620992 Q8NDZ9 215 aa5.51□□□□□ -1.53
PTPDC1-204ENST00000620992 OBSCN-AS1Q96MR7 158 aa5.51□□□□□ -1.53
PTPDC1-204ENST00000620992 TRBV7-6A0A0J9YX20 115 aa5.5□□□□□ -1.53
PTPDC1-204ENST00000620992 EPM2AB3EWF7 344 aa5.5□□□□□ -1.53
PTPDC1-204ENST00000620992 HCG22E2RYF7 251 aa5.5□□□□□ -1.53
PTPDC1-204ENST00000620992 CASC10Q5T4H9 136 aa5.49□□□□□ -1.53
PTPDC1-204ENST00000620992 SERP2Q8N6R1 65 aa5.49□□□□□ -1.53
PTPDC1-204ENST00000620992 PRYO14603 147 aa5.49□□□□□ -1.53
PTPDC1-204ENST00000620992 PLA2G1BP04054 148 aaKnown RBP5.49□□□□□ -1.53
PTPDC1-204ENST00000620992 TYMSOSQ8TAI1 123 aa5.49□□□□□ -1.53
PTPDC1-204ENST00000620992 SERP1Q9Y6X1 66 aa5.49□□□□□ -1.53
PTPDC1-204ENST00000620992 TENM2Q9NT68 2774 aa5.49□□□□□ -1.53
PTPDC1-204ENST00000620992 ATP5EP2Q5VTU8 51 aa5.49□□□□□ -1.53
PTPDC1-204ENST00000620992 ANK3Q12955 4377 aaKnown RBP5.48□□□□□ -1.53
PTPDC1-204ENST00000620992 A6NED7 52 aa5.48□□□□□ -1.53
PTPDC1-204ENST00000620992 RPL37AP61513 92 aaKnown RBP5.48□□□□□ -1.53
PTPDC1-204ENST00000620992 CRYGAP11844 174 aa5.47□□□□□ -1.53
PTPDC1-204ENST00000620992 H3BNG1 76 aa5.47□□□□□ -1.53
PTPDC1-204ENST00000620992 SERTAD4-AS1Q5TG53 156 aa5.47□□□□□ -1.53
PTPDC1-204ENST00000620992 OTOGQ6ZRI0 2925 aa5.46□□□□□ -1.54
PTPDC1-204ENST00000620992 C4orf26Q17RF5 130 aa5.46□□□□□ -1.54
PTPDC1-204ENST00000620992 CYSTM1Q9H1C7 97 aa5.46□□□□□ -1.54
PTPDC1-204ENST00000620992 TRRAPQ9Y4A5 3859 aa5.45□□□□□ -1.54
PTPDC1-204ENST00000620992 K7ERS5 55 aa5.44□□□□□ -1.54
PTPDC1-204ENST00000620992 LINC00476Q8WZB0 136 aa5.44□□□□□ -1.54
PTPDC1-204ENST00000620992 H0Y9P7 68 aa5.44□□□□□ -1.54
PTPDC1-204ENST00000620992 PSPHP1O15172 72 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms