RNA–Protein interactions for RNA: ENST00000606769.1

SNORA28-201, Transcript of small nucleolar RNA, H/ACA box 28, humanhuman

BASIC

Gene SNORA28, Length 126 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA28-201ENST00000606769 USP9YO00507 2555 aaPredicted RBP-0.84□□□□□ -2.54
SNORA28-201ENST00000606769 DMXL1Q9Y485 3027 aa-0.84□□□□□ -2.54
SNORA28-201ENST00000606769 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.84□□□□□ -2.54
SNORA28-201ENST00000606769 ITPR3Q14573 2671 aa-0.84□□□□□ -2.54
SNORA28-201ENST00000606769 KIF20BQ96Q89 1820 aa-0.85□□□□□ -2.54
SNORA28-201ENST00000606769 ZZEF1O43149 2961 aa-0.85□□□□□ -2.55
SNORA28-201ENST00000606769 H0YGG7 62 aa-0.85□□□□□ -2.55
SNORA28-201ENST00000606769 LEPROTL1O95214 131 aa-0.85□□□□□ -2.55
SNORA28-201ENST00000606769 C4AP0C0L4 1744 aa-0.85□□□□□ -2.55
SNORA28-201ENST00000606769 C4BP0C0L5 1744 aa-0.85□□□□□ -2.55
SNORA28-201ENST00000606769 COX7BP24311 80 aa-0.85□□□□□ -2.55
SNORA28-201ENST00000606769 AKAP9Q99996 3911 aa-0.85□□□□□ -2.55
SNORA28-201ENST00000606769 ALKQ9UM73 1620 aa-0.86□□□□□ -2.55
SNORA28-201ENST00000606769 FYCO1Q9BQS8 1478 aa-0.86□□□□□ -2.55
SNORA28-201ENST00000606769 S100PP25815 95 aa-0.86□□□□□ -2.55
SNORA28-201ENST00000606769 ALKAL2Q6UX46 152 aa-0.86□□□□□ -2.55
SNORA28-201ENST00000606769 AP4S1Q9Y587 144 aa-0.86□□□□□ -2.55
SNORA28-201ENST00000606769 LRRC7Q96NW7 1537 aa-0.86□□□□□ -2.55
SNORA28-201ENST00000606769 LAMA1P25391 3075 aa-0.86□□□□□ -2.55
SNORA28-201ENST00000606769 EPPK1P58107 5090 aaKnown RBP-0.86□□□□□ -2.55
SNORA28-201ENST00000606769 PKD1L3Q7Z443 1732 aa-0.86□□□□□ -2.55
SNORA28-201ENST00000606769 CLTCQ00610 1675 aaKnown RBP-0.87□□□□□ -2.55
SNORA28-201ENST00000606769 CNTLNQ9NXG0 1405 aa-0.87□□□□□ -2.55
SNORA28-201ENST00000606769 EPRSP07814 1512 aaKnown RBP-0.87□□□□□ -2.55
SNORA28-201ENST00000606769 H3BNG1 76 aa-0.87□□□□□ -2.55
SNORA28-201ENST00000606769 FAUP35544 74 aaKnown RBP-0.87□□□□□ -2.55
SNORA28-201ENST00000606769 COL5A1-AS1Q5SY13 56 aa-0.87□□□□□ -2.55
SNORA28-201ENST00000606769 NCMAPQ5T1S8 102 aa-0.87□□□□□ -2.55
SNORA28-201ENST00000606769 MYO18BQ8IUG5 2567 aa-0.87□□□□□ -2.55
SNORA28-201ENST00000606769 UBR1Q8IWV7 1749 aa-0.87□□□□□ -2.55
SNORA28-201ENST00000606769 SCN11AQ9UI33 1791 aa-0.88□□□□□ -2.55
SNORA28-201ENST00000606769 UQCRHLA0A096LP55 91 aa-0.88□□□□□ -2.55
SNORA28-201ENST00000606769 RBP2P50120 134 aa-0.88□□□□□ -2.55
SNORA28-201ENST00000606769 NMSQ5H8A3 153 aa-0.88□□□□□ -2.55
SNORA28-201ENST00000606769 ZNF720Q7Z2F6 126 aa-0.88□□□□□ -2.55
SNORA28-201ENST00000606769 DPY30Q9C005 99 aa-0.88□□□□□ -2.55
SNORA28-201ENST00000606769 FANCAO15360 1455 aa-0.88□□□□□ -2.55
SNORA28-201ENST00000606769 DNAH11Q96DT5 4516 aa-0.88□□□□□ -2.55
SNORA28-201ENST00000606769 USP32Q8NFA0 1604 aa-0.89□□□□□ -2.55
SNORA28-201ENST00000606769 MYH4Q9Y623 1939 aa-0.89□□□□□ -2.55
SNORA28-201ENST00000606769 COX6B2Q6YFQ2 88 aa-0.89□□□□□ -2.55
SNORA28-201ENST00000606769 ATP7BP35670 1465 aa-0.89□□□□□ -2.55
SNORA28-201ENST00000606769 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.89□□□□□ -2.55
SNORA28-201ENST00000606769 RGPD8O14715 1765 aaPredicted RBP-0.89□□□□□ -2.55
SNORA28-201ENST00000606769 RGPD5Q99666 1765 aa-0.89□□□□□ -2.55
SNORA28-201ENST00000606769 ANKRD11Q6UB99 2663 aaPredicted RBP-0.89□□□□□ -2.55
SNORA28-201ENST00000606769 NEXMIFQ5QGS0 1516 aa-0.89□□□□□ -2.55
SNORA28-201ENST00000606769 VPS13BQ7Z7G8 4022 aa-0.9□□□□□ -2.55
SNORA28-201ENST00000606769 UBR3Q6ZT12 1888 aa-0.9□□□□□ -2.55
SNORA28-201ENST00000606769 ZNF831Q5JPB2 1677 aa-0.9□□□□□ -2.55
SNORA28-201ENST00000606769 ABCC10Q5T3U5 1492 aa-0.9□□□□□ -2.55
SNORA28-201ENST00000606769 LRRC9Q6ZRR7 1453 aa-0.9□□□□□ -2.55
SNORA28-201ENST00000606769 LINC00032P0C843 101 aa-0.9□□□□□ -2.55
SNORA28-201ENST00000606769 C20orf78Q9BR46 151 aa-0.9□□□□□ -2.55
SNORA28-201ENST00000606769 PEG3Q9GZU2 1588 aa-0.91□□□□□ -2.55
SNORA28-201ENST00000606769 ATP10BO94823 1461 aa-0.91□□□□□ -2.55
SNORA28-201ENST00000606769 ANKRD26Q9UPS8 1709 aa-0.91□□□□□ -2.55
SNORA28-201ENST00000606769 ACBD7Q8N6N7 88 aa-0.91□□□□□ -2.56
SNORA28-201ENST00000606769 TCEAL7Q9BRU2 100 aa-0.91□□□□□ -2.56
SNORA28-201ENST00000606769 PLXNC1O60486 1568 aa-0.91□□□□□ -2.56
SNORA28-201ENST00000606769 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.91□□□□□ -2.56
SNORA28-201ENST00000606769 GCN1Q92616 2671 aaKnown RBP-0.92□□□□□ -2.56
SNORA28-201ENST00000606769 POLR1AO95602 1720 aaPredicted RBP-0.92□□□□□ -2.56
SNORA28-201ENST00000606769 SUPT6HQ7KZ85 1726 aaKnown RBP-0.92□□□□□ -2.56
SNORA28-201ENST00000606769 DSPP15924 2871 aaKnown RBP-0.92□□□□□ -2.56
SNORA28-201ENST00000606769 MYO3AQ8NEV4 1616 aa-0.92□□□□□ -2.56
SNORA28-201ENST00000606769 MAP3K1Q13233 1512 aa-0.92□□□□□ -2.56
SNORA28-201ENST00000606769 HMGN2P05204 90 aaKnown RBP-0.92□□□□□ -2.56
SNORA28-201ENST00000606769 GAFA1Q96PS6 74 aa-0.92□□□□□ -2.56
SNORA28-201ENST00000606769 SNHG12Q9BXW3 62 aa-0.92□□□□□ -2.56
SNORA28-201ENST00000606769 WIZO95785 1651 aa-0.92□□□□□ -2.56
SNORA28-201ENST00000606769 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.92□□□□□ -2.56
SNORA28-201ENST00000606769 DOT1LQ8TEK3 1739 aa-0.92□□□□□ -2.56
SNORA28-201ENST00000606769 KALRNO60229 2985 aa-0.93□□□□□ -2.56
SNORA28-201ENST00000606769 TRAV21A0A0B4J279 112 aa-0.93□□□□□ -2.56
SNORA28-201ENST00000606769 A0A1B0GUT8 65 aa-0.93□□□□□ -2.56
SNORA28-201ENST00000606769 C9orf92A6NGG3 77 aa-0.93□□□□□ -2.56
SNORA28-201ENST00000606769 IQCF6A8MYZ5 107 aa-0.93□□□□□ -2.56
SNORA28-201ENST00000606769 TMEM131LA2VDJ0 1609 aa-0.93□□□□□ -2.56
SNORA28-201ENST00000606769 RGPD3A6NKT7 1758 aaPredicted RBP-0.93□□□□□ -2.56
SNORA28-201ENST00000606769 RGPD4Q7Z3J3 1758 aa-0.93□□□□□ -2.56
SNORA28-201ENST00000606769 NEBP20929 6669 aa-0.94□□□□□ -2.56
SNORA28-201ENST00000606769 DNAH2Q9P225 4427 aa-0.94□□□□□ -2.56
SNORA28-201ENST00000606769 TIAM2Q8IVF5 1701 aa-0.94□□□□□ -2.56
SNORA28-201ENST00000606769 CEP162Q5TB80 1403 aa-0.94□□□□□ -2.56
SNORA28-201ENST00000606769 H0YAA0 97 aa-0.94□□□□□ -2.56
SNORA28-201ENST00000606769 MTORP42345 2549 aa-0.95□□□□□ -2.56
SNORA28-201ENST00000606769 NESP48681 1621 aa-0.95□□□□□ -2.56
SNORA28-201ENST00000606769 M0R143 59 aa-0.95□□□□□ -2.56
SNORA28-201ENST00000606769 PLGLAQ15195 96 aa-0.95□□□□□ -2.56
SNORA28-201ENST00000606769 MGAM2Q2M2H8 2515 aa-0.95□□□□□ -2.56
SNORA28-201ENST00000606769 NWD1Q149M9 1564 aa-0.96□□□□□ -2.56
SNORA28-201ENST00000606769 ANKRD50Q9ULJ7 1429 aa-0.96□□□□□ -2.56
SNORA28-201ENST00000606769 LAMA3Q16787 3333 aa-0.96□□□□□ -2.56
SNORA28-201ENST00000606769 LINC00158P58513 81 aa-0.96□□□□□ -2.56
SNORA28-201ENST00000606769 PRO3102Q9H379 93 aa-0.96□□□□□ -2.56
SNORA28-201ENST00000606769 ACACAQ13085 2346 aa-0.97□□□□□ -2.56
SNORA28-201ENST00000606769 HYDINQ4G0P3 5121 aa-0.97□□□□□ -2.56
SNORA28-201ENST00000606769 VPS8Q8N3P4 1428 aa-0.97□□□□□ -2.56
SNORA28-201ENST00000606769 RYR1P21817 5038 aa-0.97□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms