RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 NOTCH2Q04721 2471 aa6.4□□□□□ -1.39
NFKB1-212ENST00000600343 NCOR2Q9Y618 2525 aa6.4□□□□□ -1.39
NFKB1-212ENST00000600343 REG3AQ06141 175 aa6.4□□□□□ -1.39
NFKB1-212ENST00000600343 A0A096LPF7 62 aa6.39□□□□□ -1.39
NFKB1-212ENST00000600343 RETNLBQ9BQ08 111 aa6.39□□□□□ -1.39
NFKB1-212ENST00000600343 B4DSR2 109 aa6.39□□□□□ -1.39
NFKB1-212ENST00000600343 GYPEP15421 78 aa6.39□□□□□ -1.39
NFKB1-212ENST00000600343 PRO3102Q9H379 93 aa6.39□□□□□ -1.39
NFKB1-212ENST00000600343 IGLV7-46A0A075B6I9 117 aa6.38□□□□□ -1.39
NFKB1-212ENST00000600343 CCL19Q99731 98 aa6.38□□□□□ -1.39
NFKB1-212ENST00000600343 LINC00476Q8WZB0 136 aa6.37□□□□□ -1.39
NFKB1-212ENST00000600343 CNBPP62633 177 aaKnown RBP6.37□□□□□ -1.39
NFKB1-212ENST00000600343 SPRR4Q96PI1 79 aa6.37□□□□□ -1.39
NFKB1-212ENST00000600343 ANKRD11Q6UB99 2663 aaPredicted RBP6.37□□□□□ -1.39
NFKB1-212ENST00000600343 C6orf48Q9UBA6 75 aa6.36□□□□□ -1.39
NFKB1-212ENST00000600343 C7orf33Q8WU49 177 aa6.36□□□□□ -1.39
NFKB1-212ENST00000600343 ZNF706Q9Y5V0 76 aaPredicted RBP6.35□□□□□ -1.39
NFKB1-212ENST00000600343 MAP1AP78559 2803 aaPredicted RBP6.35□□□□□ -1.39
NFKB1-212ENST00000600343 ASB16-AS1Q495Z4 193 aa6.35□□□□□ -1.39
NFKB1-212ENST00000600343 GVQW2A0A096LPI5 108 aaPredicted RBP6.34□□□□□ -1.39
NFKB1-212ENST00000600343 DEFB130BP0DP73 79 aa6.34□□□□□ -1.39
NFKB1-212ENST00000600343 DEFB130AP0DP74 79 aa6.34□□□□□ -1.39
NFKB1-212ENST00000600343 ABCA2Q9BZC7 2435 aa6.34□□□□□ -1.39
NFKB1-212ENST00000600343 ITPR1Q14643 2758 aa6.34□□□□□ -1.39
NFKB1-212ENST00000600343 CELSR1Q9NYQ6 3014 aa6.34□□□□□ -1.4
NFKB1-212ENST00000600343 ANKRD17O75179 2603 aaKnown RBP6.33□□□□□ -1.4
NFKB1-212ENST00000600343 FN1P02751 2386 aaKnown RBP6.33□□□□□ -1.4
NFKB1-212ENST00000600343 PCOTHQ58A44 107 aa6.33□□□□□ -1.4
NFKB1-212ENST00000600343 FBXL19-AS1Q494R0 122 aa6.33□□□□□ -1.4
NFKB1-212ENST00000600343 HRNRQ86YZ3 2850 aaPredicted RBP6.32□□□□□ -1.4
NFKB1-212ENST00000600343 TNP2Q05952 138 aa6.32□□□□□ -1.4
NFKB1-212ENST00000600343 CHD6Q8TD26 2715 aa6.32□□□□□ -1.4
NFKB1-212ENST00000600343 IGLV1-50A0A075B6I6 118 aa6.32□□□□□ -1.4
NFKB1-212ENST00000600343 KRTAP29-1A8MX34 341 aaPredicted RBP6.32□□□□□ -1.4
NFKB1-212ENST00000600343 NAV2Q8IVL1 2488 aa6.31□□□□□ -1.4
NFKB1-212ENST00000600343 A0A1W2PPR1 153 aa6.31□□□□□ -1.4
NFKB1-212ENST00000600343 MAPK1IP1LQ8NDC0 245 aa6.31□□□□□ -1.4
NFKB1-212ENST00000600343 HIVEP3Q5T1R4 2406 aa6.31□□□□□ -1.4
NFKB1-212ENST00000600343 MUC3AQ02505 3323 aa6.31□□□□□ -1.4
NFKB1-212ENST00000600343 RPL37AP61513 92 aaKnown RBP6.3□□□□□ -1.4
NFKB1-212ENST00000600343 RTL8CO15255 209 aa6.3□□□□□ -1.4
NFKB1-212ENST00000600343 CSNK1G2-AS1Q8NCQ2 148 aa6.3□□□□□ -1.4
NFKB1-212ENST00000600343 ZNF702PQ9H963 129 aa6.3□□□□□ -1.4
NFKB1-212ENST00000600343 H0Y9J4 135 aa6.3□□□□□ -1.4
NFKB1-212ENST00000600343 CSAG1Q6PB30 78 aa6.3□□□□□ -1.4
NFKB1-212ENST00000600343 GIG44P09565 113 aaPredicted RBP6.29□□□□□ -1.4
NFKB1-212ENST00000600343 DHRS4-AS1Q9P1J3 65 aa6.28□□□□□ -1.4
NFKB1-212ENST00000600343 IGLV1-51P01701 117 aa6.28□□□□□ -1.4
NFKB1-212ENST00000600343 MSMBP08118 114 aa6.28□□□□□ -1.4
NFKB1-212ENST00000600343 CAMK2N2Q96S95 79 aa6.28□□□□□ -1.4
NFKB1-212ENST00000600343 PKD1L2Q7Z442 2459 aa6.28□□□□□ -1.4
NFKB1-212ENST00000600343 HIVEP2P31629 2446 aa6.28□□□□□ -1.4
NFKB1-212ENST00000600343 CHD8Q9HCK8 2581 aa6.28□□□□□ -1.4
NFKB1-212ENST00000600343 IGLV5-37A0A075B6J1 123 aa6.27□□□□□ -1.41
NFKB1-212ENST00000600343 PRO0255Q9UI72 69 aa6.27□□□□□ -1.41
NFKB1-212ENST00000600343 HRES1P13985 223 aa6.26□□□□□ -1.41
NFKB1-212ENST00000600343 A0A087X002 238 aa6.26□□□□□ -1.41
NFKB1-212ENST00000600343 HTN3P15516 51 aa6.26□□□□□ -1.41
NFKB1-212ENST00000600343 A0A0G2JQZ4 141 aa6.25□□□□□ -1.41
NFKB1-212ENST00000600343 A0A1W2PNN7 141 aa6.25□□□□□ -1.41
NFKB1-212ENST00000600343 Q6ZR54 194 aa6.25□□□□□ -1.41
NFKB1-212ENST00000600343 SPTBN4Q9H254 2564 aa6.25□□□□□ -1.41
NFKB1-212ENST00000600343 A0A087WSZ3 146 aa6.25□□□□□ -1.41
NFKB1-212ENST00000600343 ABCA12Q86UK0 2595 aa6.24□□□□□ -1.41
NFKB1-212ENST00000600343 EGFEM1PQ0D2K5 195 aa6.24□□□□□ -1.41
NFKB1-212ENST00000600343 OXLD1Q5BKU9 147 aa6.24□□□□□ -1.41
NFKB1-212ENST00000600343 C1orf134Q5TEV5 83 aa6.24□□□□□ -1.41
NFKB1-212ENST00000600343 Q6ZRX8 168 aa6.24□□□□□ -1.41
NFKB1-212ENST00000600343 BSNQ9UPA5 3926 aa6.23□□□□□ -1.41
NFKB1-212ENST00000600343 CSMD2Q7Z408 3487 aa6.23□□□□□ -1.41
NFKB1-212ENST00000600343 C4orf3Q8WVX3 66 aa6.23□□□□□ -1.41
NFKB1-212ENST00000600343 POLQO75417 2590 aa6.22□□□□□ -1.41
NFKB1-212ENST00000600343 CRYBG3Q68DQ2 2970 aa6.22□□□□□ -1.41
NFKB1-212ENST00000600343 CUBNO60494 3623 aa6.22□□□□□ -1.41
NFKB1-212ENST00000600343 JMJD1CQ15652 2540 aa6.22□□□□□ -1.41
NFKB1-212ENST00000600343 IGFL1Q6UW32 110 aa6.2□□□□□ -1.42
NFKB1-212ENST00000600343 RPL37AP8A6NKH3 93 aa6.19□□□□□ -1.42
NFKB1-212ENST00000600343 MTORP42345 2549 aa6.18□□□□□ -1.42
NFKB1-212ENST00000600343 A8MWP4 228 aa6.18□□□□□ -1.42
NFKB1-212ENST00000600343 PRR34Q9NV39 138 aa6.18□□□□□ -1.42
NFKB1-212ENST00000600343 SPATA8Q6RVD6 105 aa6.17□□□□□ -1.42
NFKB1-212ENST00000600343 CMC4P56277 68 aaPredicted RBP6.17□□□□□ -1.42
NFKB1-212ENST00000600343 NBPF19A0A087WUL8 3843 aa6.16□□□□□ -1.42
NFKB1-212ENST00000600343 IGHV6-1A0A0B4J1U7 121 aa6.15□□□□□ -1.42
NFKB1-212ENST00000600343 IGKV2-24A0A0C4DH68 120 aa6.15□□□□□ -1.43
NFKB1-212ENST00000600343 LRRK2Q5S007 2527 aa6.15□□□□□ -1.43
NFKB1-212ENST00000600343 DEFB131BA0A096LNP1 70 aa6.15□□□□□ -1.43
NFKB1-212ENST00000600343 KRTAP4-16G5E9R7 235 aaPredicted RBP6.15□□□□□ -1.43
NFKB1-212ENST00000600343 MIR22HGQ0VDD5 57 aa6.15□□□□□ -1.43
NFKB1-212ENST00000600343 ROMO1P60602 79 aa6.14□□□□□ -1.43
NFKB1-212ENST00000600343 A0A1B0GU69 56 aa6.14□□□□□ -1.43
NFKB1-212ENST00000600343 LELP1Q5T871 98 aa6.14□□□□□ -1.43
NFKB1-212ENST00000600343 MMP24-AS1A0A0U1RRL7 71 aa6.13□□□□□ -1.43
NFKB1-212ENST00000600343 REG3GQ6UW15 175 aa6.13□□□□□ -1.43
NFKB1-212ENST00000600343 TP53AIP1Q9HCN2 124 aa6.13□□□□□ -1.43
NFKB1-212ENST00000600343 ZFYVE26Q68DK2 2539 aa6.13□□□□□ -1.43
NFKB1-212ENST00000600343 APCP25054 2843 aa6.13□□□□□ -1.43
NFKB1-212ENST00000600343 SPRR1AP35321 89 aa6.11□□□□□ -1.43
NFKB1-212ENST00000600343 C19orf73Q9NVV2 129 aa6.1□□□□□ -1.43
NFKB1-212ENST00000600343 C15orf56Q8N910 161 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms