RNA–Protein interactions for RNA: ENST00000597928.5

USHBP1-207, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 3,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-207ENST00000597928 NDUFC2-KCTD14E9PQ53 114 aa8.27□□□□□ -1.09
USHBP1-207ENST00000597928 KRTAP24-1Q3LI83 254 aa8.27□□□□□ -1.09
USHBP1-207ENST00000597928 LINC00612Q8N6U2 182 aa8.27□□□□□ -1.09
USHBP1-207ENST00000597928 LRCOL1A6NCL2 159 aa8.26□□□□□ -1.09
USHBP1-207ENST00000597928 ST20-AS1Q8NBB2 130 aa8.26□□□□□ -1.09
USHBP1-207ENST00000597928 SERTAD4-AS1Q5TG53 156 aa8.25□□□□□ -1.09
USHBP1-207ENST00000597928 F8WEM9 126 aa8.25□□□□□ -1.09
USHBP1-207ENST00000597928 Q6ZQT0 140 aa8.25□□□□□ -1.09
USHBP1-207ENST00000597928 EGFEM1PQ0D2K5 195 aa8.25□□□□□ -1.09
USHBP1-207ENST00000597928 FAM30AQ9NZY2 134 aa8.24□□□□□ -1.09
USHBP1-207ENST00000597928 FUSP35637 526 aaKnown RBP eCLIP8.23□□□□□ -1.09
USHBP1-207ENST00000597928 HRCT1Q6UXD1 115 aa8.23□□□□□ -1.09
USHBP1-207ENST00000597928 C7orf33Q8WU49 177 aa8.23□□□□□ -1.09
USHBP1-207ENST00000597928 PRLHP81277 87 aa8.23□□□□□ -1.09
USHBP1-207ENST00000597928 MPLKIPQ8TAP9 179 aa8.22□□□□□ -1.09
USHBP1-207ENST00000597928 IGLV6-57P01721 117 aa8.21□□□□□ -1.09
USHBP1-207ENST00000597928 VPREB1P12018 145 aa8.21□□□□□ -1.09
USHBP1-207ENST00000597928 C15orf56Q8N910 161 aa8.21□□□□□ -1.09
USHBP1-207ENST00000597928 TM2D3Q9BRN9 247 aa8.21□□□□□ -1.09
USHBP1-207ENST00000597928 C4orf26Q17RF5 130 aa8.2□□□□□ -1.1
USHBP1-207ENST00000597928 WFDC13Q8IUB5 93 aa8.2□□□□□ -1.1
USHBP1-207ENST00000597928 PRR34Q9NV39 138 aa8.2□□□□□ -1.1
USHBP1-207ENST00000597928 C2orf48Q96LS8 159 aa8.2□□□□□ -1.1
USHBP1-207ENST00000597928 FAM236DA0A1B0GTK5 79 aa8.18□□□□□ -1.1
USHBP1-207ENST00000597928 FAM236CP0DP71 79 aa8.18□□□□□ -1.1
USHBP1-207ENST00000597928 LINC01600Q96MT4 127 aa8.17□□□□□ -1.1
USHBP1-207ENST00000597928 LINC00588Q9Y4M8 146 aa8.17□□□□□ -1.1
USHBP1-207ENST00000597928 LINC00167Q96N53 147 aa8.17□□□□□ -1.1
USHBP1-207ENST00000597928 CHTF8P0CG12 524 aa8.17□□□□□ -1.1
USHBP1-207ENST00000597928 CSMD3Q7Z407 3707 aa8.16□□□□□ -1.1
USHBP1-207ENST00000597928 ELOF1P60002 83 aaKnown RBP8.16□□□□□ -1.1
USHBP1-207ENST00000597928 C1orf137Q5JT78 98 aa8.16□□□□□ -1.1
USHBP1-207ENST00000597928 ATP5EP2Q5VTU8 51 aa8.16□□□□□ -1.1
USHBP1-207ENST00000597928 CRYGAP11844 174 aa8.15□□□□□ -1.1
USHBP1-207ENST00000597928 PDE6GP18545 87 aa8.15□□□□□ -1.11
USHBP1-207ENST00000597928 ANK3Q12955 4377 aaKnown RBP8.14□□□□□ -1.11
USHBP1-207ENST00000597928 TMEM258P61165 79 aa8.14□□□□□ -1.11
USHBP1-207ENST00000597928 OBSCN-AS1Q96MR7 158 aa8.13□□□□□ -1.11
USHBP1-207ENST00000597928 SRRM2Q9UQ35 2752 aaKnown RBP8.13□□□□□ -1.11
USHBP1-207ENST00000597928 ERC2-IT1O76042 136 aa8.12□□□□□ -1.11
USHBP1-207ENST00000597928 UBE2AP49459 152 aa8.12□□□□□ -1.11
USHBP1-207ENST00000597928 LINC01556Q5JQF7 62 aa8.12□□□□□ -1.11
USHBP1-207ENST00000597928 TRAV7A0A075B6U4 112 aa8.11□□□□□ -1.11
USHBP1-207ENST00000597928 OXTP01178 125 aa8.11□□□□□ -1.11
USHBP1-207ENST00000597928 MRPL55Q7Z7F7 128 aaKnown RBP8.11□□□□□ -1.11
USHBP1-207ENST00000597928 LINC00528Q8N1L1 170 aa8.1□□□□□ -1.11
USHBP1-207ENST00000597928 A0A087WSZ3 146 aa8.1□□□□□ -1.11
USHBP1-207ENST00000597928 SMIM29Q86T20 159 aa8.09□□□□□ -1.11
USHBP1-207ENST00000597928 H0Y9J4 135 aa8.09□□□□□ -1.11
USHBP1-207ENST00000597928 Q8N377 158 aa8.09□□□□□ -1.11
USHBP1-207ENST00000597928 RPL37AP61513 92 aaKnown RBP8.09□□□□□ -1.12
USHBP1-207ENST00000597928 IGLV9-49A0A0B4J1Y8 123 aa8.07□□□□□ -1.12
USHBP1-207ENST00000597928 A0A0U1RQV1 116 aa8.07□□□□□ -1.12
USHBP1-207ENST00000597928 LOC110117498A0A087WWA1 95 aa8.07□□□□□ -1.12
USHBP1-207ENST00000597928 C5orf47Q569G3 176 aa8.07□□□□□ -1.12
USHBP1-207ENST00000597928 TMEM254Q8TBM7 123 aa8.07□□□□□ -1.12
USHBP1-207ENST00000597928 REG3GQ6UW15 175 aa8.06□□□□□ -1.12
USHBP1-207ENST00000597928 PHF5AQ7RTV0 110 aaKnown RBP8.06□□□□□ -1.12
USHBP1-207ENST00000597928 GVQW2A0A096LPI5 108 aaPredicted RBP8.06□□□□□ -1.12
USHBP1-207ENST00000597928 NDUFS5O43920 106 aa8.06□□□□□ -1.12
USHBP1-207ENST00000597928 DHRS4-AS1Q9P1J3 65 aa8.05□□□□□ -1.12
USHBP1-207ENST00000597928 BRK1Q8WUW1 75 aa8.05□□□□□ -1.12
USHBP1-207ENST00000597928 LINC00474Q9P2X8 69 aa8.04□□□□□ -1.12
USHBP1-207ENST00000597928 DNAH10OSP0CZ25 163 aa8.04□□□□□ -1.12
USHBP1-207ENST00000597928 Q6ZRX8 168 aa8.04□□□□□ -1.12
USHBP1-207ENST00000597928 TRBV7-4A0A0J9YYF1 115 aa8.04□□□□□ -1.12
USHBP1-207ENST00000597928 PKIGQ9Y2B9 76 aa8.03□□□□□ -1.12
USHBP1-207ENST00000597928 K7EIL1 84 aa8.03□□□□□ -1.12
USHBP1-207ENST00000597928 Q9BRP9 147 aa8.02□□□□□ -1.12
USHBP1-207ENST00000597928 COL7A1Q02388 2944 aa8.01□□□□□ -1.13
USHBP1-207ENST00000597928 H3BQ85 93 aa8.01□□□□□ -1.13
USHBP1-207ENST00000597928 CXCL6P80162 114 aa8.01□□□□□ -1.13
USHBP1-207ENST00000597928 K7EQZ3 153 aa8.01□□□□□ -1.13
USHBP1-207ENST00000597928 SPINK6Q6UWN8 80 aa8□□□□□ -1.13
USHBP1-207ENST00000597928 LINC00476Q8WZB0 136 aa8□□□□□ -1.13
USHBP1-207ENST00000597928 A0A1W2PNM2 257 aa8□□□□□ -1.13
USHBP1-207ENST00000597928 KRTAP26-1Q6PEX3 210 aa7.99□□□□□ -1.13
USHBP1-207ENST00000597928 IGLV1-50A0A075B6I6 118 aa7.99□□□□□ -1.13
USHBP1-207ENST00000597928 H7BZZ5 65 aa7.99□□□□□ -1.13
USHBP1-207ENST00000597928 KCNQ1DNQ9H478 68 aa7.98□□□□□ -1.13
USHBP1-207ENST00000597928 PRYO14603 147 aa7.97□□□□□ -1.13
USHBP1-207ENST00000597928 LINC00208Q96KT6 92 aa7.97□□□□□ -1.13
USHBP1-207ENST00000597928 TRBV7-6A0A0J9YX20 115 aa7.97□□□□□ -1.13
USHBP1-207ENST00000597928 H3BNG1 76 aa7.97□□□□□ -1.13
USHBP1-207ENST00000597928 IGKV4-1P06312 121 aa7.97□□□□□ -1.13
USHBP1-207ENST00000597928 ANAPC11Q9NYG5 84 aa7.96□□□□□ -1.13
USHBP1-207ENST00000597928 TGP01266 2768 aa7.95□□□□□ -1.14
USHBP1-207ENST00000597928 Q8NBF4 154 aa7.94□□□□□ -1.14
USHBP1-207ENST00000597928 KRTAP1-5Q9BYS1 174 aa7.94□□□□□ -1.14
USHBP1-207ENST00000597928 PSPHP1O15172 72 aa7.94□□□□□ -1.14
USHBP1-207ENST00000597928 EPM2AB3EWF7 344 aa7.93□□□□□ -1.14
USHBP1-207ENST00000597928 CDK2AP2O75956 126 aa7.93□□□□□ -1.14
USHBP1-207ENST00000597928 MP68P56378 58 aa7.92□□□□□ -1.14
USHBP1-207ENST00000597928 SERP1Q9Y6X1 66 aa7.92□□□□□ -1.14
USHBP1-207ENST00000597928 SEC61GP60059 68 aa7.92□□□□□ -1.14
USHBP1-207ENST00000597928 RPS28P62857 69 aaKnown RBP7.92□□□□□ -1.14
USHBP1-207ENST00000597928 LINC00336Q6ZUF6 198 aa7.92□□□□□ -1.14
USHBP1-207ENST00000597928 B9D2Q9BPU9 175 aa7.92□□□□□ -1.14
USHBP1-207ENST00000597928 PCOTHQ58A44 107 aa7.91□□□□□ -1.14
USHBP1-207ENST00000597928 Q5XG85 94 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms