RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 DNAH10OSP0CZ25 163 aa11.32□□□□□ -0.6
SMARCA4-215ENST00000590574 KCNQ1DNQ9H478 68 aa11.32□□□□□ -0.6
SMARCA4-215ENST00000590574 H0Y9P7 68 aa11.32□□□□□ -0.6
SMARCA4-215ENST00000590574 TRBV7-4A0A0J9YYF1 115 aa11.32□□□□□ -0.6
SMARCA4-215ENST00000590574 DMXL2Q8TDJ6 3036 aa11.32□□□□□ -0.6
SMARCA4-215ENST00000590574 C4orf48Q5BLP8 95 aa11.31□□□□□ -0.6
SMARCA4-215ENST00000590574 ATMQ13315 3056 aa11.3□□□□□ -0.6
SMARCA4-215ENST00000590574 NUPR2A6NF83 97 aa11.29□□□□□ -0.6
SMARCA4-215ENST00000590574 IGLV1-50A0A075B6I6 118 aa11.28□□□□□ -0.6
SMARCA4-215ENST00000590574 ITPR3Q14573 2671 aa11.28□□□□□ -0.6
SMARCA4-215ENST00000590574 IGHV6-1A0A0B4J1U7 121 aa11.28□□□□□ -0.6
SMARCA4-215ENST00000590574 PSPHP1O15172 72 aa11.28□□□□□ -0.6
SMARCA4-215ENST00000590574 TACC2O95359 2948 aa11.27□□□□□ -0.61
SMARCA4-215ENST00000590574 PHF5AQ7RTV0 110 aaKnown RBP11.25□□□□□ -0.61
SMARCA4-215ENST00000590574 Q8N377 158 aa11.25□□□□□ -0.61
SMARCA4-215ENST00000590574 C1orf195Q5TG92 126 aa11.25□□□□□ -0.61
SMARCA4-215ENST00000590574 PCOTHQ58A44 107 aa11.25□□□□□ -0.61
SMARCA4-215ENST00000590574 DMXL1Q9Y485 3027 aa11.24□□□□□ -0.61
SMARCA4-215ENST00000590574 A6NED7 52 aa11.23□□□□□ -0.61
SMARCA4-215ENST00000590574 C16orf90A8MZG2 172 aa11.23□□□□□ -0.61
SMARCA4-215ENST00000590574 KLKP1Q107X0 134 aa11.23□□□□□ -0.61
SMARCA4-215ENST00000590574 ZZEF1O43149 2961 aa11.23□□□□□ -0.61
SMARCA4-215ENST00000590574 K7EQZ3 153 aa11.22□□□□□ -0.61
SMARCA4-215ENST00000590574 Q8NDZ9 215 aa11.22□□□□□ -0.61
SMARCA4-215ENST00000590574 PRR15LQ9BU68 103 aa11.22□□□□□ -0.61
SMARCA4-215ENST00000590574 hDV103S1A0JD37 113 aa11.21□□□□□ -0.61
SMARCA4-215ENST00000590574 EPM2AB3EWF7 344 aa11.21□□□□□ -0.62
SMARCA4-215ENST00000590574 H7BZZ5 65 aa11.21□□□□□ -0.62
SMARCA4-215ENST00000590574 RPL37AP61513 92 aaKnown RBP11.21□□□□□ -0.62
SMARCA4-215ENST00000590574 HECTD1Q9ULT8 2610 aa11.21□□□□□ -0.62
SMARCA4-215ENST00000590574 C1orf64Q8NEQ6 169 aa11.2□□□□□ -0.62
SMARCA4-215ENST00000590574 ERC2-IT1O76042 136 aa11.2□□□□□ -0.62
SMARCA4-215ENST00000590574 LY6G6CO95867 125 aa11.2□□□□□ -0.62
SMARCA4-215ENST00000590574 PRO0628Q9UI54 55 aa11.2□□□□□ -0.62
SMARCA4-215ENST00000590574 CIRBP-AS1Q8TBR5 109 aa11.19□□□□□ -0.62
SMARCA4-215ENST00000590574 CHTF8P0CG12 524 aa11.19□□□□□ -0.62
SMARCA4-215ENST00000590574 DMDP11532 3685 aa11.18□□□□□ -0.62
SMARCA4-215ENST00000590574 IGLV5-52A0A0A0MRZ9 124 aa11.17□□□□□ -0.62
SMARCA4-215ENST00000590574 MDFIQ99750 246 aa11.16□□□□□ -0.62
SMARCA4-215ENST00000590574 TLX1NBP0CAT3 122 aa11.15□□□□□ -0.62
SMARCA4-215ENST00000590574 CASC10Q5T4H9 136 aa11.15□□□□□ -0.62
SMARCA4-215ENST00000590574 A0A0G2JQZ4 141 aa11.14□□□□□ -0.63
SMARCA4-215ENST00000590574 A0A1W2PNN7 141 aa11.14□□□□□ -0.63
SMARCA4-215ENST00000590574 CHD6Q8TD26 2715 aa11.13□□□□□ -0.63
SMARCA4-215ENST00000590574 PLA2G2DQ9UNK4 145 aa11.13□□□□□ -0.63
SMARCA4-215ENST00000590574 CFAP47Q6ZTR5 3102 aa11.13□□□□□ -0.63
SMARCA4-215ENST00000590574 IGFL1Q6UW32 110 aa11.13□□□□□ -0.63
SMARCA4-215ENST00000590574 CFAP46Q8IYW2 2715 aa11.11□□□□□ -0.63
SMARCA4-215ENST00000590574 ZFHX4Q86UP3 3567 aa11.11□□□□□ -0.63
SMARCA4-215ENST00000590574 CYSTM1Q9H1C7 97 aa11.09□□□□□ -0.63
SMARCA4-215ENST00000590574 IGSF10Q6WRI0 2623 aa11.09□□□□□ -0.63
SMARCA4-215ENST00000590574 A0A1W2PNM2 257 aa11.09□□□□□ -0.63
SMARCA4-215ENST00000590574 F8P00451 2351 aa11.09□□□□□ -0.63
SMARCA4-215ENST00000590574 MOBPQ13875 183 aa11.08□□□□□ -0.63
SMARCA4-215ENST00000590574 COL12A1Q99715 3063 aa11.07□□□□□ -0.64
SMARCA4-215ENST00000590574 NBDYA0A0U1RRE5 68 aa11.07□□□□□ -0.64
SMARCA4-215ENST00000590574 RETNLBQ9BQ08 111 aa11.07□□□□□ -0.64
SMARCA4-215ENST00000590574 PMAIP1Q13794 54 aa11.06□□□□□ -0.64
SMARCA4-215ENST00000590574 K7EIL1 84 aa11.06□□□□□ -0.64
SMARCA4-215ENST00000590574 SEC61GP60059 68 aa11.05□□□□□ -0.64
SMARCA4-215ENST00000590574 C1orf134Q5TEV5 83 aa11.05□□□□□ -0.64
SMARCA4-215ENST00000590574 TEX15Q9BXT5 2789 aa11.05□□□□□ -0.64
SMARCA4-215ENST00000590574 ASPMQ8IZT6 3477 aa11.04□□□□□ -0.64
SMARCA4-215ENST00000590574 ATRQ13535 2644 aa11.04□□□□□ -0.64
SMARCA4-215ENST00000590574 IGLV5-48A0A075B6I7 105 aa11.04□□□□□ -0.64
SMARCA4-215ENST00000590574 A8MWP4 228 aa11.03□□□□□ -0.64
SMARCA4-215ENST00000590574 USP24Q9UPU5 2620 aa11.03□□□□□ -0.64
SMARCA4-215ENST00000590574 H3BPC8 53 aa11.03□□□□□ -0.64
SMARCA4-215ENST00000590574 TP53AIP1Q9HCN2 124 aa11.03□□□□□ -0.64
SMARCA4-215ENST00000590574 TRAV22A0A0B4J277 110 aa11.02□□□□□ -0.65
SMARCA4-215ENST00000590574 HRNRQ86YZ3 2850 aaPredicted RBP11.02□□□□□ -0.65
SMARCA4-215ENST00000590574 LIMD2Q9BT23 127 aa11□□□□□ -0.65
SMARCA4-215ENST00000590574 GCN1Q92616 2671 aaKnown RBP10.99□□□□□ -0.65
SMARCA4-215ENST00000590574 IGLV5-37A0A075B6J1 123 aa10.99□□□□□ -0.65
SMARCA4-215ENST00000590574 RTL8CO15255 209 aa10.97□□□□□ -0.65
SMARCA4-215ENST00000590574 LINC00336Q6ZUF6 198 aa10.97□□□□□ -0.65
SMARCA4-215ENST00000590574 FLNCQ14315 2725 aa10.97□□□□□ -0.65
SMARCA4-215ENST00000590574 OCR1Q9BZK8 76 aa10.96□□□□□ -0.65
SMARCA4-215ENST00000590574 PRR15Q8IV56 129 aa10.96□□□□□ -0.66
SMARCA4-215ENST00000590574 WIPF1O43516 503 aa10.94□□□□□ -0.66
SMARCA4-215ENST00000590574 MUC3AQ02505 3323 aa10.94□□□□□ -0.66
SMARCA4-215ENST00000590574 LAMA5O15230 3695 aa10.94□□□□□ -0.66
SMARCA4-215ENST00000590574 DCHS1Q96JQ0 3298 aa10.92□□□□□ -0.66
SMARCA4-215ENST00000590574 ITPR1Q14643 2758 aa10.91□□□□□ -0.66
SMARCA4-215ENST00000590574 NBEAL2Q6ZNJ1 2754 aa10.91□□□□□ -0.66
SMARCA4-215ENST00000590574 HELZ2Q9BYK8 2649 aaKnown RBP10.91□□□□□ -0.66
SMARCA4-215ENST00000590574 SPAG11AQ6PDA7 123 aa10.91□□□□□ -0.66
SMARCA4-215ENST00000590574 CNBPP62633 177 aaKnown RBP10.9□□□□□ -0.66
SMARCA4-215ENST00000590574 DSCR10P59022 87 aa10.89□□□□□ -0.67
SMARCA4-215ENST00000590574 C9orf163Q8N9P6 203 aa10.88□□□□□ -0.67
SMARCA4-215ENST00000590574 KRTAP26-1Q6PEX3 210 aa10.88□□□□□ -0.67
SMARCA4-215ENST00000590574 SPRR4Q96PI1 79 aa10.88□□□□□ -0.67
SMARCA4-215ENST00000590574 A8MUN3 132 aa10.87□□□□□ -0.67
SMARCA4-215ENST00000590574 RELNP78509 3460 aa10.87□□□□□ -0.67
SMARCA4-215ENST00000590574 FLNBO75369 2602 aaKnown RBP10.86□□□□□ -0.67
SMARCA4-215ENST00000590574 SMG1Q96Q15 3661 aaKnown RBP10.86□□□□□ -0.67
SMARCA4-215ENST00000590574 COA5Q86WW8 74 aa10.84□□□□□ -0.67
SMARCA4-215ENST00000590574 Q5XG85 94 aa10.83□□□□□ -0.68
SMARCA4-215ENST00000590574 APLNQ9ULZ1 77 aa10.83□□□□□ -0.68
SMARCA4-215ENST00000590574 SETXQ7Z333 2677 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms