RNA–Protein interactions for RNA: ENST00000587476.1

TUBD1-207, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 825 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-207ENST00000587476 EEA1Q15075 1411 aa0.38□□□□□ -2.35
TUBD1-207ENST00000587476 SCN11AQ9UI33 1791 aa0.37□□□□□ -2.35
TUBD1-207ENST00000587476 ETDCA0A1B0GVM5 59 aa0.37□□□□□ -2.35
TUBD1-207ENST00000587476 K7EMI3 77 aa0.37□□□□□ -2.35
TUBD1-207ENST00000587476 NDUFA3O95167 84 aa0.37□□□□□ -2.35
TUBD1-207ENST00000587476 LELP1Q5T871 98 aa0.37□□□□□ -2.35
TUBD1-207ENST00000587476 DEFB105AQ8NG35 78 aa0.37□□□□□ -2.35
TUBD1-207ENST00000587476 KCNQ1DNQ9H478 68 aa0.37□□□□□ -2.35
TUBD1-207ENST00000587476 FMN2Q9NZ56 1722 aa0.37□□□□□ -2.35
TUBD1-207ENST00000587476 RGPD8O14715 1765 aaPredicted RBP0.37□□□□□ -2.35
TUBD1-207ENST00000587476 LTN1O94822 1766 aa0.37□□□□□ -2.35
TUBD1-207ENST00000587476 RGPD2P0DJD1 1756 aa0.37□□□□□ -2.35
TUBD1-207ENST00000587476 RGPD5Q99666 1765 aa0.37□□□□□ -2.35
TUBD1-207ENST00000587476 MUC5ACP98088 5654 aa0.36□□□□□ -2.35
TUBD1-207ENST00000587476 LRRC37AA6NMS7 1700 aa0.36□□□□□ -2.35
TUBD1-207ENST00000587476 ZNF292O60281 2723 aa0.36□□□□□ -2.35
TUBD1-207ENST00000587476 DEFB131BA0A096LNP1 70 aa0.36□□□□□ -2.35
TUBD1-207ENST00000587476 MRPL33O75394 65 aaKnown RBP0.36□□□□□ -2.35
TUBD1-207ENST00000587476 CRIP1P50238 77 aa0.36□□□□□ -2.35
TUBD1-207ENST00000587476 KLK9Q2XQG4 91 aa0.36□□□□□ -2.35
TUBD1-207ENST00000587476 H1FX-AS1Q4G0G2 97 aa0.36□□□□□ -2.35
TUBD1-207ENST00000587476 COX6B2Q6YFQ2 88 aa0.36□□□□□ -2.35
TUBD1-207ENST00000587476 CDKN2A-AS1Q9UH64 79 aa0.36□□□□□ -2.35
TUBD1-207ENST00000587476 CPS1P31327 1500 aa0.36□□□□□ -2.35
TUBD1-207ENST00000587476 FAT4Q6V0I7 4981 aa0.36□□□□□ -2.35
TUBD1-207ENST00000587476 NCOR2Q9Y618 2525 aa0.36□□□□□ -2.35
TUBD1-207ENST00000587476 MAST4O15021 2626 aa0.35□□□□□ -2.35
TUBD1-207ENST00000587476 PRXQ9BXM0 1461 aa0.35□□□□□ -2.35
TUBD1-207ENST00000587476 LINC00158P58513 81 aa0.35□□□□□ -2.35
TUBD1-207ENST00000587476 WFDC13Q8IUB5 93 aa0.35□□□□□ -2.35
TUBD1-207ENST00000587476 PRO3102Q9H379 93 aa0.35□□□□□ -2.35
TUBD1-207ENST00000587476 URB1O60287 2271 aaKnown RBP0.35□□□□□ -2.35
TUBD1-207ENST00000587476 PKD1L3Q7Z443 1732 aa0.35□□□□□ -2.35
TUBD1-207ENST00000587476 KIF20BQ96Q89 1820 aa0.34□□□□□ -2.35
TUBD1-207ENST00000587476 M0R1W7 72 aa0.34□□□□□ -2.36
TUBD1-207ENST00000587476 NWD1Q149M9 1564 aa0.34□□□□□ -2.36
TUBD1-207ENST00000587476 DEFB114Q30KQ6 69 aa0.34□□□□□ -2.36
TUBD1-207ENST00000587476 NCBP2-AS2Q69YL0 99 aa0.34□□□□□ -2.36
TUBD1-207ENST00000587476 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.34□□□□□ -2.36
TUBD1-207ENST00000587476 DOT1LQ8TEK3 1739 aa0.34□□□□□ -2.36
TUBD1-207ENST00000587476 NMES1Q9C002 83 aa0.34□□□□□ -2.36
TUBD1-207ENST00000587476 SYNE1Q8NF91 8797 aaKnown RBP0.34□□□□□ -2.36
TUBD1-207ENST00000587476 SPTBN1Q01082 2364 aaKnown RBP0.34□□□□□ -2.36
TUBD1-207ENST00000587476 ARFGEF2Q9Y6D5 1785 aa0.34□□□□□ -2.36
TUBD1-207ENST00000587476 CCDC180Q9P1Z9 1646 aa0.34□□□□□ -2.36
TUBD1-207ENST00000587476 EIF2AK4Q9P2K8 1649 aaKnown RBP0.34□□□□□ -2.36
TUBD1-207ENST00000587476 LRP1Q07954 4544 aaKnown RBP0.34□□□□□ -2.36
TUBD1-207ENST00000587476 ITSN1Q15811 1721 aa0.33□□□□□ -2.36
TUBD1-207ENST00000587476 CHD9Q3L8U1 2897 aa0.33□□□□□ -2.36
TUBD1-207ENST00000587476 RICTORQ6R327 1708 aa0.33□□□□□ -2.36
TUBD1-207ENST00000587476 PLXNC1O60486 1568 aa0.33□□□□□ -2.36
TUBD1-207ENST00000587476 GLI2P10070 1586 aa0.33□□□□□ -2.36
TUBD1-207ENST00000587476 TIAM1Q13009 1591 aa0.33□□□□□ -2.36
TUBD1-207ENST00000587476 LOC730098B7Z3J9 87 aa0.33□□□□□ -2.36
TUBD1-207ENST00000587476 H0YAA0 97 aa0.33□□□□□ -2.36
TUBD1-207ENST00000587476 SPINK4O60575 86 aa0.33□□□□□ -2.36
TUBD1-207ENST00000587476 ABCA6Q8N139 1617 aa0.33□□□□□ -2.36
TUBD1-207ENST00000587476 NHSQ6T4R5 1651 aa0.33□□□□□ -2.36
TUBD1-207ENST00000587476 UBR3Q6ZT12 1888 aa0.33□□□□□ -2.36
TUBD1-207ENST00000587476 ABCC6O95255 1503 aa0.33□□□□□ -2.36
TUBD1-207ENST00000587476 IGSF10Q6WRI0 2623 aa0.33□□□□□ -2.36
TUBD1-207ENST00000587476 POLR1AO95602 1720 aaPredicted RBP0.33□□□□□ -2.36
TUBD1-207ENST00000587476 THOC2Q8NI27 1593 aaKnown RBP0.32□□□□□ -2.36
TUBD1-207ENST00000587476 ANK2Q01484 3957 aa0.32□□□□□ -2.36
TUBD1-207ENST00000587476 IGIPA6NJ69 53 aa0.32□□□□□ -2.36
TUBD1-207ENST00000587476 SNRPGP15A8MWD9 76 aa0.32□□□□□ -2.36
TUBD1-207ENST00000587476 SERF2P84101 59 aa0.32□□□□□ -2.36
TUBD1-207ENST00000587476 CFAP43Q8NDM7 1665 aa0.32□□□□□ -2.36
TUBD1-207ENST00000587476 TIAM2Q8IVF5 1701 aa0.32□□□□□ -2.36
TUBD1-207ENST00000587476 ABCA10Q8WWZ4 1543 aa0.32□□□□□ -2.36
TUBD1-207ENST00000587476 UGGT1Q9NYU2 1555 aa0.32□□□□□ -2.36
TUBD1-207ENST00000587476 PREX2Q70Z35 1606 aa0.31□□□□□ -2.36
TUBD1-207ENST00000587476 CICQ96RK0 1608 aaPredicted RBP0.31□□□□□ -2.36
TUBD1-207ENST00000587476 WIZO95785 1651 aa0.31□□□□□ -2.36
TUBD1-207ENST00000587476 PREX1Q8TCU6 1659 aa0.31□□□□□ -2.36
TUBD1-207ENST00000587476 DEFB130BP0DP73 79 aa0.31□□□□□ -2.36
TUBD1-207ENST00000587476 DEFB130AP0DP74 79 aa0.31□□□□□ -2.36
TUBD1-207ENST00000587476 WNK2Q9Y3S1 2297 aa0.31□□□□□ -2.36
TUBD1-207ENST00000587476 NESP48681 1621 aa0.31□□□□□ -2.36
TUBD1-207ENST00000587476 PLCH1Q4KWH8 1693 aa0.3□□□□□ -2.36
TUBD1-207ENST00000587476 PIEZO2Q9H5I5 2752 aa0.3□□□□□ -2.36
TUBD1-207ENST00000587476 QSER1Q2KHR3 1735 aa0.3□□□□□ -2.36
TUBD1-207ENST00000587476 UNC79Q9P2D8 2635 aa0.3□□□□□ -2.36
TUBD1-207ENST00000587476 LYNX1G3V0Z9 82 aa0.3□□□□□ -2.36
TUBD1-207ENST00000587476 IAPPP10997 89 aa0.3□□□□□ -2.36
TUBD1-207ENST00000587476 PLNP26678 52 aa0.3□□□□□ -2.36
TUBD1-207ENST00000587476 MINOS1Q5TGZ0 78 aa0.3□□□□□ -2.36
TUBD1-207ENST00000587476 MDN1Q9NU22 5596 aa0.3□□□□□ -2.36
TUBD1-207ENST00000587476 ALS2Q96Q42 1657 aa0.3□□□□□ -2.36
TUBD1-207ENST00000587476 TNRC6CQ9HCJ0 1690 aaKnown RBP0.3□□□□□ -2.36
TUBD1-207ENST00000587476 NRAPQ86VF7 1730 aa0.3□□□□□ -2.36
TUBD1-207ENST00000587476 BCORQ6W2J9 1755 aa0.29□□□□□ -2.36
TUBD1-207ENST00000587476 NCOR1O75376 2440 aa0.29□□□□□ -2.36
TUBD1-207ENST00000587476 FANCD2Q9BXW9 1451 aa0.29□□□□□ -2.36
TUBD1-207ENST00000587476 CLASP1Q7Z460 1538 aa0.29□□□□□ -2.36
TUBD1-207ENST00000587476 CMC2Q9NRP2 79 aa0.29□□□□□ -2.36
TUBD1-207ENST00000587476 C6orf48Q9UBA6 75 aa0.29□□□□□ -2.36
TUBD1-207ENST00000587476 DMBT1Q9UGM3 2413 aaPredicted RBP0.29□□□□□ -2.36
TUBD1-207ENST00000587476 PARP4Q9UKK3 1724 aaKnown RBP0.29□□□□□ -2.36
TUBD1-207ENST00000587476 COL14A1Q05707 1796 aaKnown RBP0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms