RNA–Protein interactions for RNA: ENST00000587451.2

CACNA1A-208, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-208ENST00000587451 PRB3Q04118 309 aaPredicted RBP0.79□□□□□ -2.28
CACNA1A-208ENST00000587451 Q8IZM0 81 aa0.79□□□□□ -2.28
CACNA1A-208ENST00000587451 MRPL34Q9BQ48 92 aaKnown RBP0.79□□□□□ -2.28
CACNA1A-208ENST00000587451 NMES1Q9C002 83 aa0.79□□□□□ -2.28
CACNA1A-208ENST00000587451 KCNQ1DNQ9H478 68 aa0.79□□□□□ -2.28
CACNA1A-208ENST00000587451 LY75O60449 1722 aa0.78□□□□□ -2.28
CACNA1A-208ENST00000587451 NDUFA3O95167 84 aa0.78□□□□□ -2.28
CACNA1A-208ENST00000587451 PRH1P02810 166 aa0.78□□□□□ -2.28
CACNA1A-208ENST00000587451 CRIP1P50238 77 aa0.78□□□□□ -2.28
CACNA1A-208ENST00000587451 URB1O60287 2271 aaKnown RBP0.78□□□□□ -2.28
CACNA1A-208ENST00000587451 TNRC6CQ9HCJ0 1690 aaKnown RBP0.78□□□□□ -2.29
CACNA1A-208ENST00000587451 LELP1Q5T871 98 aa0.77□□□□□ -2.29
CACNA1A-208ENST00000587451 APLNQ9ULZ1 77 aa0.77□□□□□ -2.29
CACNA1A-208ENST00000587451 EFCAB6Q5THR3 1501 aa0.77□□□□□ -2.29
CACNA1A-208ENST00000587451 ANKRD36CQ5JPF3 1778 aa0.76□□□□□ -2.29
CACNA1A-208ENST00000587451 C3P01024 1663 aa0.76□□□□□ -2.29
CACNA1A-208ENST00000587451 BIVM-ERCC5R4GMW8 1640 aa0.76□□□□□ -2.29
CACNA1A-208ENST00000587451 DEFB131BA0A096LNP1 70 aa0.76□□□□□ -2.29
CACNA1A-208ENST00000587451 MRPL33O75394 65 aaKnown RBP0.76□□□□□ -2.29
CACNA1A-208ENST00000587451 DEFB114Q30KQ6 69 aa0.76□□□□□ -2.29
CACNA1A-208ENST00000587451 PRO3102Q9H379 93 aa0.76□□□□□ -2.29
CACNA1A-208ENST00000587451 CDKN2A-AS1Q9UH64 79 aa0.76□□□□□ -2.29
CACNA1A-208ENST00000587451 ABCA5Q8WWZ7 1642 aa0.75□□□□□ -2.29
CACNA1A-208ENST00000587451 IGIPA6NJ69 53 aa0.75□□□□□ -2.29
CACNA1A-208ENST00000587451 COX6B1P14854 86 aa0.75□□□□□ -2.29
CACNA1A-208ENST00000587451 SPRR1AP35321 89 aa0.75□□□□□ -2.29
CACNA1A-208ENST00000587451 SERF2P84101 59 aa0.75□□□□□ -2.29
CACNA1A-208ENST00000587451 TNCP24821 2201 aa0.74□□□□□ -2.29
CACNA1A-208ENST00000587451 TOP2AP11388 1531 aaKnown RBP0.74□□□□□ -2.29
CACNA1A-208ENST00000587451 AGLP35573 1532 aa0.74□□□□□ -2.29
CACNA1A-208ENST00000587451 ROS1P08922 2347 aa0.74□□□□□ -2.29
CACNA1A-208ENST00000587451 LOC730098B7Z3J9 87 aa0.74□□□□□ -2.29
CACNA1A-208ENST00000587451 CCL22O00626 93 aa0.74□□□□□ -2.29
CACNA1A-208ENST00000587451 TOMM5Q8N4H5 51 aa0.74□□□□□ -2.29
CACNA1A-208ENST00000587451 CMC2Q9NRP2 79 aa0.74□□□□□ -2.29
CACNA1A-208ENST00000587451 GOLGA4Q13439 2230 aaKnown RBP0.74□□□□□ -2.29
CACNA1A-208ENST00000587451 GPR98Q8WXG9 6306 aa0.74□□□□□ -2.29
CACNA1A-208ENST00000587451 ADCY10Q96PN6 1610 aa0.74□□□□□ -2.29
CACNA1A-208ENST00000587451 AHCTF1Q8WYP5 2266 aa0.73□□□□□ -2.29
CACNA1A-208ENST00000587451 SPRR1BP22528 89 aa0.73□□□□□ -2.29
CACNA1A-208ENST00000587451 PLNP26678 52 aa0.73□□□□□ -2.29
CACNA1A-208ENST00000587451 LINC00158P58513 81 aa0.73□□□□□ -2.29
CACNA1A-208ENST00000587451 KLK9Q2XQG4 91 aa0.73□□□□□ -2.29
CACNA1A-208ENST00000587451 H1FX-AS1Q4G0G2 97 aa0.73□□□□□ -2.29
CACNA1A-208ENST00000587451 DEFB105AQ8NG35 78 aa0.73□□□□□ -2.29
CACNA1A-208ENST00000587451 TIMM8BQ9Y5J9 83 aaPredicted RBP0.73□□□□□ -2.29
CACNA1A-208ENST00000587451 NRXN3Q9Y4C0 1643 aa0.72□□□□□ -2.29
CACNA1A-208ENST00000587451 COX6B2Q6YFQ2 88 aa0.72□□□□□ -2.29
CACNA1A-208ENST00000587451 WFDC13Q8IUB5 93 aa0.72□□□□□ -2.29
CACNA1A-208ENST00000587451 NAV3Q8IVL0 2385 aa0.72□□□□□ -2.29
CACNA1A-208ENST00000587451 JMJD1CQ15652 2540 aa0.72□□□□□ -2.29
CACNA1A-208ENST00000587451 C4AP0C0L4 1744 aa0.72□□□□□ -2.29
CACNA1A-208ENST00000587451 C4BP0C0L5 1744 aa0.72□□□□□ -2.29
CACNA1A-208ENST00000587451 TOGARAM1Q9Y4F4 1720 aa0.72□□□□□ -2.29
CACNA1A-208ENST00000587451 FBN2P35556 2912 aa0.71□□□□□ -2.29
CACNA1A-208ENST00000587451 ABCC8Q09428 1581 aa0.71□□□□□ -2.3
CACNA1A-208ENST00000587451 H0YAA0 97 aa0.71□□□□□ -2.3
CACNA1A-208ENST00000587451 Q5VSD8 79 aa0.71□□□□□ -2.3
CACNA1A-208ENST00000587451 ABRACLQ9P1F3 81 aa0.71□□□□□ -2.3
CACNA1A-208ENST00000587451 FAM208BQ5VWN6 2430 aa0.71□□□□□ -2.3
CACNA1A-208ENST00000587451 CACNA1EQ15878 2313 aa0.7□□□□□ -2.3
CACNA1A-208ENST00000587451 ANKRD17O75179 2603 aaKnown RBP0.7□□□□□ -2.3
CACNA1A-208ENST00000587451 SMIM27A0A1W2PRY6 76 aa0.69□□□□□ -2.3
CACNA1A-208ENST00000587451 H0YGX0 51 aa0.69□□□□□ -2.3
CACNA1A-208ENST00000587451 SPINK4O60575 86 aa0.69□□□□□ -2.3
CACNA1A-208ENST00000587451 DOPEY2Q9Y3R5 2298 aa0.69□□□□□ -2.3
CACNA1A-208ENST00000587451 IQGAP2Q13576 1575 aa0.69□□□□□ -2.3
CACNA1A-208ENST00000587451 USF3Q68DE3 2245 aa0.69□□□□□ -2.3
CACNA1A-208ENST00000587451 MINOS1Q5TGZ0 78 aa0.68□□□□□ -2.3
CACNA1A-208ENST00000587451 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.68□□□□□ -2.3
CACNA1A-208ENST00000587451 PLCE1Q9P212 2302 aa0.68□□□□□ -2.3
CACNA1A-208ENST00000587451 IAPPP10997 89 aa0.67□□□□□ -2.3
CACNA1A-208ENST00000587451 LINC00308Q8TCZ7 52 aa0.67□□□□□ -2.3
CACNA1A-208ENST00000587451 ASH1LQ9NR48 2969 aaKnown RBP0.66□□□□□ -2.3
CACNA1A-208ENST00000587451 PTPRQQ9UMZ3 2332 aa0.66□□□□□ -2.3
CACNA1A-208ENST00000587451 FAM208AQ9UK61 1670 aaKnown RBP0.66□□□□□ -2.3
CACNA1A-208ENST00000587451 KIAA0586Q9BVV6 1533 aa0.66□□□□□ -2.3
CACNA1A-208ENST00000587451 LYNX1G3V0Z9 82 aa0.66□□□□□ -2.3
CACNA1A-208ENST00000587451 DEFB130BP0DP73 79 aa0.66□□□□□ -2.3
CACNA1A-208ENST00000587451 DEFB130AP0DP74 79 aa0.66□□□□□ -2.3
CACNA1A-208ENST00000587451 DDX60Q8IY21 1712 aaKnown RBP0.66□□□□□ -2.3
CACNA1A-208ENST00000587451 DEPDC5O75140 1603 aa0.65□□□□□ -2.31
CACNA1A-208ENST00000587451 CDC42BPAQ5VT25 1732 aa0.65□□□□□ -2.31
CACNA1A-208ENST00000587451 LINC01546A6NGU7 62 aa0.65□□□□□ -2.31
CACNA1A-208ENST00000587451 TFF3Q07654 80 aa0.65□□□□□ -2.31
CACNA1A-208ENST00000587451 TMEM167BQ9NRX6 74 aa0.65□□□□□ -2.31
CACNA1A-208ENST00000587451 C6orf48Q9UBA6 75 aa0.65□□□□□ -2.31
CACNA1A-208ENST00000587451 DEFB109BQ30KR1 87 aa0.64□□□□□ -2.31
CACNA1A-208ENST00000587451 IQGAP1P46940 1657 aa0.64□□□□□ -2.31
CACNA1A-208ENST00000587451 CNOT1A5YKK6 2376 aaKnown RBP0.64□□□□□ -2.31
CACNA1A-208ENST00000587451 PTPRZ1P23471 2315 aaPredicted RBP0.64□□□□□ -2.31
CACNA1A-208ENST00000587451 LMO7Q8WWI1 1683 aa0.63□□□□□ -2.31
CACNA1A-208ENST00000587451 RPS27P42677 84 aaKnown RBP0.63□□□□□ -2.31
CACNA1A-208ENST00000587451 RPS27LQ71UM5 84 aaKnown RBP0.63□□□□□ -2.31
CACNA1A-208ENST00000587451 MUC5ACP98088 5654 aa0.62□□□□□ -2.31
CACNA1A-208ENST00000587451 ZNF469Q96JG9 3925 aaPredicted RBP0.62□□□□□ -2.31
CACNA1A-208ENST00000587451 ZNF462Q96JM2 2506 aa0.62□□□□□ -2.31
CACNA1A-208ENST00000587451 MEGF8Q7Z7M0 2845 aa0.61□□□□□ -2.31
CACNA1A-208ENST00000587451 C2CD3Q4AC94 2353 aa0.61□□□□□ -2.31
CACNA1A-208ENST00000587451 NFAT5O94916 1531 aa0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms