RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 CEND1Q8N111 149 aa12.49□□□□□ -0.41
CCDC42-203ENST00000581598 LPAP08519 4548 aa12.48□□□□□ -0.41
CCDC42-203ENST00000581598 RPL24P83731 157 aaKnown RBP12.48□□□□□ -0.41
CCDC42-203ENST00000581598 BCE1O60756 84 aa12.47□□□□□ -0.41
CCDC42-203ENST00000581598 CTAG1AP78358 180 aa12.47□□□□□ -0.41
CCDC42-203ENST00000581598 RPL28P46779 137 aaKnown RBP12.46□□□□□ -0.41
CCDC42-203ENST00000581598 LINC00167Q96N53 147 aa12.46□□□□□ -0.41
CCDC42-203ENST00000581598 A4D1N5 150 aa12.45□□□□□ -0.42
CCDC42-203ENST00000581598 FXYD2P54710 66 aa12.44□□□□□ -0.42
CCDC42-203ENST00000581598 IGKV2-28A0A075B6P5 120 aa12.43□□□□□ -0.42
CCDC42-203ENST00000581598 TRBV10-2A0A0K0K1G8 114 aa12.43□□□□□ -0.42
CCDC42-203ENST00000581598 IGKV2D-28P01615 120 aa12.43□□□□□ -0.42
CCDC42-203ENST00000581598 NKAPP1Q8N9T2 125 aa12.42□□□□□ -0.42
CCDC42-203ENST00000581598 BVES-AS1Q5T3Y7 98 aa12.41□□□□□ -0.42
CCDC42-203ENST00000581598 TMEM238LA0A1B0GVL6 79 aa12.4□□□□□ -0.42
CCDC42-203ENST00000581598 A6NJY4 79 aa12.4□□□□□ -0.42
CCDC42-203ENST00000581598 RPL37AP8A6NKH3 93 aa12.4□□□□□ -0.42
CCDC42-203ENST00000581598 M0R143 59 aa12.4□□□□□ -0.42
CCDC42-203ENST00000581598 M0R378 163 aa12.4□□□□□ -0.42
CCDC42-203ENST00000581598 NCR3O14931 201 aa12.4□□□□□ -0.42
CCDC42-203ENST00000581598 KRTAP13-1Q8IUC0 172 aa12.38□□□□□ -0.43
CCDC42-203ENST00000581598 GAGE10A6NGK3 116 aa12.37□□□□□ -0.43
CCDC42-203ENST00000581598 CFC1BP0CG36 223 aa12.37□□□□□ -0.43
CCDC42-203ENST00000581598 CFC1P0CG37 223 aa12.37□□□□□ -0.43
CCDC42-203ENST00000581598 HINT1P49773 126 aaPredicted RBP12.37□□□□□ -0.43
CCDC42-203ENST00000581598 LINC00337Q8N6G1 96 aa12.37□□□□□ -0.43
CCDC42-203ENST00000581598 A0A0B4J2C4 111 aa12.36□□□□□ -0.43
CCDC42-203ENST00000581598 A0A1B0GWB2 263 aa12.36□□□□□ -0.43
CCDC42-203ENST00000581598 A0A087X002 238 aa12.35□□□□□ -0.43
CCDC42-203ENST00000581598 IGLV6-57P01721 117 aa12.35□□□□□ -0.43
CCDC42-203ENST00000581598 CRYGAP11844 174 aa12.35□□□□□ -0.43
CCDC42-203ENST00000581598 TRAV13-2A0A0B4J235 113 aa12.34□□□□□ -0.43
CCDC42-203ENST00000581598 PCP4L1A6NKN8 68 aa12.34□□□□□ -0.43
CCDC42-203ENST00000581598 TRBV10-3A0A0K0K1G6 114 aa12.33□□□□□ -0.44
CCDC42-203ENST00000581598 UBE2AP49459 152 aa12.32□□□□□ -0.44
CCDC42-203ENST00000581598 PRR4Q16378 134 aa12.32□□□□□ -0.44
CCDC42-203ENST00000581598 NHP2Q9NX24 153 aaKnown RBP12.32□□□□□ -0.44
CCDC42-203ENST00000581598 TYMSOSQ8TAI1 123 aa12.31□□□□□ -0.44
CCDC42-203ENST00000581598 TMEM126AQ9H061 195 aa12.31□□□□□ -0.44
CCDC42-203ENST00000581598 S100A7L2Q5SY68 101 aa12.3□□□□□ -0.44
CCDC42-203ENST00000581598 RAB37Q96AX2 223 aa12.3□□□□□ -0.44
CCDC42-203ENST00000581598 FAM229BQ4G0N7 80 aa12.29□□□□□ -0.44
CCDC42-203ENST00000581598 OR13C6PQ8NH95 151 aa12.29□□□□□ -0.44
CCDC42-203ENST00000581598 A6NDN8 102 aa12.28□□□□□ -0.44
CCDC42-203ENST00000581598 KCNQ1DNQ9H478 68 aa12.28□□□□□ -0.44
CCDC42-203ENST00000581598 PRO1854Q9UHT4 67 aa12.28□□□□□ -0.44
CCDC42-203ENST00000581598 K7ERJ3 54 aa12.27□□□□□ -0.45
CCDC42-203ENST00000581598 SNHG12Q9BXW3 62 aa12.27□□□□□ -0.45
CCDC42-203ENST00000581598 PRYO14603 147 aa12.26□□□□□ -0.45
CCDC42-203ENST00000581598 TSPAN13O95857 204 aa12.26□□□□□ -0.45
CCDC42-203ENST00000581598 KRTAP13-2Q52LG2 175 aa12.26□□□□□ -0.45
CCDC42-203ENST00000581598 CBY1Q9Y3M2 126 aa12.26□□□□□ -0.45
CCDC42-203ENST00000581598 BATFQ16520 125 aa12.25□□□□□ -0.45
CCDC42-203ENST00000581598 ANAPC11Q9NYG5 84 aa12.25□□□□□ -0.45
CCDC42-203ENST00000581598 TRAV23DV6A0A075B6W5 121 aa12.24□□□□□ -0.45
CCDC42-203ENST00000581598 SPRR1AP35321 89 aa12.23□□□□□ -0.45
CCDC42-203ENST00000581598 FAM19A1Q7Z5A9 133 aa12.23□□□□□ -0.45
CCDC42-203ENST00000581598 MUC2Q02817 5179 aa12.23□□□□□ -0.45
CCDC42-203ENST00000581598 PRLHP81277 87 aa12.22□□□□□ -0.45
CCDC42-203ENST00000581598 SMIM11BQ8TCY0 68 aa12.22□□□□□ -0.45
CCDC42-203ENST00000581598 KRTAP4-16G5E9R7 235 aaPredicted RBP12.2□□□□□ -0.46
CCDC42-203ENST00000581598 ZNF73O43830 326 aaPredicted RBP12.19□□□□□ -0.46
CCDC42-203ENST00000581598 H7C2G1 150 aa12.18□□□□□ -0.46
CCDC42-203ENST00000581598 LINC00304Q8N9R0 145 aa12.18□□□□□ -0.46
CCDC42-203ENST00000581598 C6orf99Q4VX62 202 aa12.17□□□□□ -0.46
CCDC42-203ENST00000581598 TRBV7-6A0A0J9YX20 115 aa12.15□□□□□ -0.46
CCDC42-203ENST00000581598 Q1RN00 199 aa12.15□□□□□ -0.46
CCDC42-203ENST00000581598 TAX1BP3O14907 124 aa12.13□□□□□ -0.47
CCDC42-203ENST00000581598 COL5A1-AS1Q5SY13 56 aa12.13□□□□□ -0.47
CCDC42-203ENST00000581598 ETDCA0A1B0GVM5 59 aa12.12□□□□□ -0.47
CCDC42-203ENST00000581598 B5MCH6 92 aa12.12□□□□□ -0.47
CCDC42-203ENST00000581598 TRIAP1O43715 76 aa12.12□□□□□ -0.47
CCDC42-203ENST00000581598 ELOF1P60002 83 aaKnown RBP12.11□□□□□ -0.47
CCDC42-203ENST00000581598 HIGD2AQ9BW72 106 aa12.11□□□□□ -0.47
CCDC42-203ENST00000581598 Q6ZRX8 168 aa12.1□□□□□ -0.47
CCDC42-203ENST00000581598 COX7BP24311 80 aa12.09□□□□□ -0.47
CCDC42-203ENST00000581598 VAMP3Q15836 100 aa12.08□□□□□ -0.48
CCDC42-203ENST00000581598 SPRR4Q96PI1 79 aa12.08□□□□□ -0.48
CCDC42-203ENST00000581598 C9orf118A6NHY6 69 aa12.07□□□□□ -0.48
CCDC42-203ENST00000581598 PSMB2P49721 201 aa12.07□□□□□ -0.48
CCDC42-203ENST00000581598 C3orf22Q8N5N4 141 aa12.07□□□□□ -0.48
CCDC42-203ENST00000581598 ZNF706Q9Y5V0 76 aaPredicted RBP12.07□□□□□ -0.48
CCDC42-203ENST00000581598 RETNLBQ9BQ08 111 aa12.06□□□□□ -0.48
CCDC42-203ENST00000581598 H0YGX0 51 aa12.05□□□□□ -0.48
CCDC42-203ENST00000581598 NAA38Q9BRA0 125 aaKnown RBP12.05□□□□□ -0.48
CCDC42-203ENST00000581598 Q9BRP9 147 aa12.05□□□□□ -0.48
CCDC42-203ENST00000581598 COX6CP09669 75 aa12.04□□□□□ -0.48
CCDC42-203ENST00000581598 TPRXLQ17RH7 258 aa12.04□□□□□ -0.48
CCDC42-203ENST00000581598 SPAG11AQ6PDA7 123 aa12.04□□□□□ -0.48
CCDC42-203ENST00000581598 A0A0U1RQV1 116 aa12.03□□□□□ -0.48
CCDC42-203ENST00000581598 H3BUT2 72 aa12.03□□□□□ -0.48
CCDC42-203ENST00000581598 SMCR5Q8TEV8 140 aa12.03□□□□□ -0.48
CCDC42-203ENST00000581598 LINC00575Q6W349 94 aa12.02□□□□□ -0.49
CCDC42-203ENST00000581598 DHRS4-AS1Q9P1J3 65 aa12.01□□□□□ -0.49
CCDC42-203ENST00000581598 IGLV7-46A0A075B6I9 117 aa12□□□□□ -0.49
CCDC42-203ENST00000581598 FAM218AQ96MZ4 157 aa12□□□□□ -0.49
CCDC42-203ENST00000581598 A0A1W2PPM0 123 aa11.98□□□□□ -0.49
CCDC42-203ENST00000581598 SCGB1C2P0DMR2 95 aa11.98□□□□□ -0.49
CCDC42-203ENST00000581598 LYRM7Q5U5X0 104 aa11.98□□□□□ -0.49
CCDC42-203ENST00000581598 CLEC2BQ92478 149 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms