RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 PIGYQ3MUY2 71 aa2□□□□□ -2.09
SMG8-205ENST00000580798 IGFL1Q6UW32 110 aa2□□□□□ -2.09
SMG8-205ENST00000580798 ALPK2Q86TB3 2170 aa2□□□□□ -2.09
SMG8-205ENST00000580798 SSC5DA1L4H1 1573 aa1.99□□□□□ -2.09
SMG8-205ENST00000580798 H3BSH0 61 aa1.99□□□□□ -2.09
SMG8-205ENST00000580798 MRPL34Q9BQ48 92 aaKnown RBP1.99□□□□□ -2.09
SMG8-205ENST00000580798 RPL37P61927 97 aaKnown RBP1.98□□□□□ -2.09
SMG8-205ENST00000580798 UNQ6190/PRO20217Q6UXQ8 127 aa1.98□□□□□ -2.09
SMG8-205ENST00000580798 BRWD1Q9NSI6 2320 aa1.98□□□□□ -2.09
SMG8-205ENST00000580798 KRTAP10-10P60014 251 aa1.97□□□□□ -2.09
SMG8-205ENST00000580798 ZFHX2Q9C0A1 2572 aaPredicted RBP1.97□□□□□ -2.09
SMG8-205ENST00000580798 PCOTHQ58A44 107 aa1.96□□□□□ -2.1
SMG8-205ENST00000580798 MED13LQ71F56 2210 aa1.96□□□□□ -2.1
SMG8-205ENST00000580798 TNRC6CQ9HCJ0 1690 aaKnown RBP1.96□□□□□ -2.1
SMG8-205ENST00000580798 RPL39P62891 51 aaKnown RBP1.95□□□□□ -2.1
SMG8-205ENST00000580798 PRCDQ00LT1 54 aa1.95□□□□□ -2.1
SMG8-205ENST00000580798 WFDC10BQ8IUB3 73 aa1.95□□□□□ -2.1
SMG8-205ENST00000580798 WFDC13Q8IUB5 93 aa1.94□□□□□ -2.1
SMG8-205ENST00000580798 RPL39LQ96EH5 51 aaKnown RBP1.94□□□□□ -2.1
SMG8-205ENST00000580798 SPINK9Q5DT21 86 aa1.93□□□□□ -2.1
SMG8-205ENST00000580798 ZFHX3Q15911 3703 aa1.92□□□□□ -2.1
SMG8-205ENST00000580798 IGLV5-48A0A075B6I7 105 aa1.92□□□□□ -2.1
SMG8-205ENST00000580798 DEFB131AP59861 70 aa1.91□□□□□ -2.1
SMG8-205ENST00000580798 DEFB123Q8N688 67 aa1.91□□□□□ -2.1
SMG8-205ENST00000580798 F5P12259 2224 aa1.91□□□□□ -2.1
SMG8-205ENST00000580798 GOLGA4Q13439 2230 aaKnown RBP1.91□□□□□ -2.1
SMG8-205ENST00000580798 RTTNQ86VV8 2226 aa1.9□□□□□ -2.1
SMG8-205ENST00000580798 LYNX1P0DP58 116 aa1.9□□□□□ -2.11
SMG8-205ENST00000580798 BRD3OSQ6XYD6 125 aa1.9□□□□□ -2.11
SMG8-205ENST00000580798 I3L2K1 104 aa1.89□□□□□ -2.11
SMG8-205ENST00000580798 RPS27P42677 84 aaKnown RBP1.89□□□□□ -2.11
SMG8-205ENST00000580798 H0YAA0 97 aa1.88□□□□□ -2.11
SMG8-205ENST00000580798 LEAP2Q969E1 77 aa1.88□□□□□ -2.11
SMG8-205ENST00000580798 KAAG1Q9UBP8 84 aa1.88□□□□□ -2.11
SMG8-205ENST00000580798 H3BUA1 57 aa1.87□□□□□ -2.11
SMG8-205ENST00000580798 COX6A2Q02221 97 aa1.87□□□□□ -2.11
SMG8-205ENST00000580798 H1FX-AS1Q4G0G2 97 aa1.87□□□□□ -2.11
SMG8-205ENST00000580798 M0QY20 66 aa1.86□□□□□ -2.11
SMG8-205ENST00000580798 KRTAP13-4Q3LI77 160 aa1.86□□□□□ -2.11
SMG8-205ENST00000580798 CACNA1CQ13936 2221 aa1.86□□□□□ -2.11
SMG8-205ENST00000580798 TECTAO75443 2155 aa1.85□□□□□ -2.11
SMG8-205ENST00000580798 FN1P02751 2386 aaKnown RBP1.85□□□□□ -2.11
SMG8-205ENST00000580798 Q6ZSA8 131 aa1.85□□□□□ -2.11
SMG8-205ENST00000580798 SHANK1Q9Y566 2161 aa1.85□□□□□ -2.11
SMG8-205ENST00000580798 DEFB130BP0DP73 79 aa1.84□□□□□ -2.11
SMG8-205ENST00000580798 DEFB130AP0DP74 79 aa1.84□□□□□ -2.11
SMG8-205ENST00000580798 DEFB103AP81534 67 aa1.84□□□□□ -2.11
SMG8-205ENST00000580798 TOMM7Q9P0U1 55 aa1.83□□□□□ -2.12
SMG8-205ENST00000580798 PRO0255Q9UI72 69 aa1.83□□□□□ -2.12
SMG8-205ENST00000580798 URB1O60287 2271 aaKnown RBP1.83□□□□□ -2.12
SMG8-205ENST00000580798 GPR179Q6PRD1 2367 aa1.83□□□□□ -2.12
SMG8-205ENST00000580798 WT1-ASQ06250 92 aa1.82□□□□□ -2.12
SMG8-205ENST00000580798 DEFB109BQ30KR1 87 aa1.82□□□□□ -2.12
SMG8-205ENST00000580798 APLNQ9ULZ1 77 aa1.82□□□□□ -2.12
SMG8-205ENST00000580798 KNTC1P50748 2209 aa1.82□□□□□ -2.12
SMG8-205ENST00000580798 ABCA1O95477 2261 aa1.81□□□□□ -2.12
SMG8-205ENST00000580798 SPRR5A0A1B0GTR4 108 aa1.81□□□□□ -2.12
SMG8-205ENST00000580798 DEFB106AQ8N104 65 aa1.81□□□□□ -2.12
SMG8-205ENST00000580798 DEFB105AQ8NG35 78 aa1.81□□□□□ -2.12
SMG8-205ENST00000580798 TMEM167AQ8TBQ9 72 aa1.81□□□□□ -2.12
SMG8-205ENST00000580798 C10orf95Q9H7T3 257 aa1.81□□□□□ -2.12
SMG8-205ENST00000580798 HIVEP2P31629 2446 aa1.81□□□□□ -2.12
SMG8-205ENST00000580798 MMP24-AS1A0A0U1RRL7 71 aa1.8□□□□□ -2.12
SMG8-205ENST00000580798 K7EIL1 84 aa1.79□□□□□ -2.12
SMG8-205ENST00000580798 K7EIM0 57 aa1.78□□□□□ -2.12
SMG8-205ENST00000580798 DEFB119Q8N690 84 aa1.78□□□□□ -2.12
SMG8-205ENST00000580798 CADP27708 2225 aa1.78□□□□□ -2.13
SMG8-205ENST00000580798 SORL1Q92673 2214 aa1.78□□□□□ -2.13
SMG8-205ENST00000580798 ASXL3Q9C0F0 2248 aa1.78□□□□□ -2.13
SMG8-205ENST00000580798 PRLHP81277 87 aa1.77□□□□□ -2.13
SMG8-205ENST00000580798 LELP1Q5T871 98 aa1.77□□□□□ -2.13
SMG8-205ENST00000580798 CACNA1EQ15878 2313 aa1.77□□□□□ -2.13
SMG8-205ENST00000580798 SPRR1AP35321 89 aa1.76□□□□□ -2.13
SMG8-205ENST00000580798 Q5VSD8 79 aa1.76□□□□□ -2.13
SMG8-205ENST00000580798 CRCT1Q9UGL9 99 aa1.76□□□□□ -2.13
SMG8-205ENST00000580798 ANKRD17O75179 2603 aaKnown RBP1.74□□□□□ -2.13
SMG8-205ENST00000580798 RPL39P5Q59GN2 51 aa1.73□□□□□ -2.13
SMG8-205ENST00000580798 NOP10Q9NPE3 64 aaKnown RBP1.73□□□□□ -2.13
SMG8-205ENST00000580798 ASCC3Q8N3C0 2202 aaKnown RBP1.72□□□□□ -2.13
SMG8-205ENST00000580798 A8MTW9 85 aa1.72□□□□□ -2.13
SMG8-205ENST00000580798 KRTAP4-1Q9BYQ7 146 aa1.72□□□□□ -2.13
SMG8-205ENST00000580798 ICE1Q9Y2F5 2266 aa1.71□□□□□ -2.13
SMG8-205ENST00000580798 DEFB108AA8MXU0 73 aa1.71□□□□□ -2.14
SMG8-205ENST00000580798 SPRR1BP22528 89 aa1.71□□□□□ -2.14
SMG8-205ENST00000580798 CLPSL2Q6UWE3 100 aa1.71□□□□□ -2.14
SMG8-205ENST00000580798 DEFB104AQ8WTQ1 72 aa1.71□□□□□ -2.14
SMG8-205ENST00000580798 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.71□□□□□ -2.14
SMG8-205ENST00000580798 AHCTF1Q8WYP5 2266 aa1.7□□□□□ -2.14
SMG8-205ENST00000580798 BPTFQ12830 3046 aa1.69□□□□□ -2.14
SMG8-205ENST00000580798 CNOT1A5YKK6 2376 aaKnown RBP1.69□□□□□ -2.14
SMG8-205ENST00000580798 S4R3F8 94 aa1.68□□□□□ -2.14
SMG8-205ENST00000580798 PDE4DIPQ5VU43 2346 aa1.67□□□□□ -2.14
SMG8-205ENST00000580798 WNK2Q9Y3S1 2297 aa1.67□□□□□ -2.14
SMG8-205ENST00000580798 SPINK1P00995 79 aa1.67□□□□□ -2.14
SMG8-205ENST00000580798 KRTAP12-1P59990 96 aa1.67□□□□□ -2.14
SMG8-205ENST00000580798 KLK9Q2XQG4 91 aa1.66□□□□□ -2.14
SMG8-205ENST00000580798 CACNA1BQ00975 2339 aa1.66□□□□□ -2.14
SMG8-205ENST00000580798 DOPEY2Q9Y3R5 2298 aa1.64□□□□□ -2.15
SMG8-205ENST00000580798 FAM208BQ5VWN6 2430 aa1.63□□□□□ -2.15
SMG8-205ENST00000580798 FCGBPQ9Y6R7 5405 aaPredicted RBP1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms