RNA–Protein interactions for RNA: ENST00000580054.1

SMARCD2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5

Gene SMARCD2, Length 477 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-208ENST00000580054 LOC107984156A0A0G2JMH3 177 aa5.53□□□□□ -1.52
SMARCD2-208ENST00000580054 PCP4L1A6NKN8 68 aa5.53□□□□□ -1.52
SMARCD2-208ENST00000580054 NDUFC2O95298 119 aa5.53□□□□□ -1.52
SMARCD2-208ENST00000580054 TSPAN13O95857 204 aa5.53□□□□□ -1.52
SMARCD2-208ENST00000580054 NPC2P61916 151 aa5.53□□□□□ -1.52
SMARCD2-208ENST00000580054 ARL17AQ8IVW1 177 aa5.53□□□□□ -1.52
SMARCD2-208ENST00000580054 NKAPP1Q8N9T2 125 aa5.53□□□□□ -1.52
SMARCD2-208ENST00000580054 XAGE1AQ9HD64 81 aa5.53□□□□□ -1.52
SMARCD2-208ENST00000580054 A6NDN8 102 aa5.52□□□□□ -1.53
SMARCD2-208ENST00000580054 TRAV13-2A0A0B4J235 113 aa5.51□□□□□ -1.53
SMARCD2-208ENST00000580054 LBHQ53QV2 105 aaPredicted RBP5.51□□□□□ -1.53
SMARCD2-208ENST00000580054 RAB37Q96AX2 223 aa5.51□□□□□ -1.53
SMARCD2-208ENST00000580054 TRBV10-2A0A0K0K1G8 114 aa5.5□□□□□ -1.53
SMARCD2-208ENST00000580054 A4D1N5 150 aa5.5□□□□□ -1.53
SMARCD2-208ENST00000580054 M0QXV9 152 aa5.5□□□□□ -1.53
SMARCD2-208ENST00000580054 M0R378 163 aa5.5□□□□□ -1.53
SMARCD2-208ENST00000580054 HINT1P49773 126 aaPredicted RBP5.5□□□□□ -1.53
SMARCD2-208ENST00000580054 UBE2BP63146 152 aa5.5□□□□□ -1.53
SMARCD2-208ENST00000580054 S100A7L2Q5SY68 101 aa5.5□□□□□ -1.53
SMARCD2-208ENST00000580054 RPL13AP40429 203 aaKnown RBP5.49□□□□□ -1.53
SMARCD2-208ENST00000580054 C9orf129Q5T035 196 aaKnown RBP5.49□□□□□ -1.53
SMARCD2-208ENST00000580054 KRTAP7-1Q8IUC3 87 aa5.49□□□□□ -1.53
SMARCD2-208ENST00000580054 OR13C6PQ8NH95 151 aa5.49□□□□□ -1.53
SMARCD2-208ENST00000580054 A0A0B4J2C4 111 aa5.48□□□□□ -1.53
SMARCD2-208ENST00000580054 BATFQ16520 125 aa5.48□□□□□ -1.53
SMARCD2-208ENST00000580054 BVES-AS1Q5T3Y7 98 aa5.48□□□□□ -1.53
SMARCD2-208ENST00000580054 SOSTDC1Q6X4U4 206 aa5.48□□□□□ -1.53
SMARCD2-208ENST00000580054 TMEM126AQ9H061 195 aa5.48□□□□□ -1.53
SMARCD2-208ENST00000580054 NHP2Q9NX24 153 aaKnown RBP5.48□□□□□ -1.53
SMARCD2-208ENST00000580054 IGLV5-37A0A075B6J1 123 aa5.47□□□□□ -1.53
SMARCD2-208ENST00000580054 NCR3O14931 201 aa5.47□□□□□ -1.53
SMARCD2-208ENST00000580054 VPREB1P12018 145 aa5.47□□□□□ -1.53
SMARCD2-208ENST00000580054 FXYD2P54710 66 aa5.47□□□□□ -1.53
SMARCD2-208ENST00000580054 RETNLBQ9BQ08 111 aa5.47□□□□□ -1.53
SMARCD2-208ENST00000580054 PRO1854Q9UHT4 67 aa5.47□□□□□ -1.53
SMARCD2-208ENST00000580054 Q1RN00 199 aa5.46□□□□□ -1.54
SMARCD2-208ENST00000580054 MRPL55Q7Z7F7 128 aaKnown RBP5.46□□□□□ -1.54
SMARCD2-208ENST00000580054 C22orf24Q9Y442 160 aa5.46□□□□□ -1.54
SMARCD2-208ENST00000580054 CFC1BP0CG36 223 aa5.45□□□□□ -1.54
SMARCD2-208ENST00000580054 CFC1P0CG37 223 aa5.45□□□□□ -1.54
SMARCD2-208ENST00000580054 EIF4EBP3O60516 100 aaPredicted RBP5.44□□□□□ -1.54
SMARCD2-208ENST00000580054 COX6CP09669 75 aa5.44□□□□□ -1.54
SMARCD2-208ENST00000580054 VAMP3Q15836 100 aa5.44□□□□□ -1.54
SMARCD2-208ENST00000580054 COL5A1-AS1Q5SY13 56 aa5.44□□□□□ -1.54
SMARCD2-208ENST00000580054 CDIP1Q9H305 208 aa5.44□□□□□ -1.54
SMARCD2-208ENST00000580054 IGKV2-28A0A075B6P5 120 aa5.43□□□□□ -1.54
SMARCD2-208ENST00000580054 A0A087X002 238 aa5.43□□□□□ -1.54
SMARCD2-208ENST00000580054 A0A1B0GWB2 263 aa5.43□□□□□ -1.54
SMARCD2-208ENST00000580054 GAGE10A6NGK3 116 aa5.43□□□□□ -1.54
SMARCD2-208ENST00000580054 ZNF861PO60384 105 aa5.43□□□□□ -1.54
SMARCD2-208ENST00000580054 SNCGO76070 127 aa5.43□□□□□ -1.54
SMARCD2-208ENST00000580054 IGKV2D-28P01615 120 aa5.43□□□□□ -1.54
SMARCD2-208ENST00000580054 PSMB2P49721 201 aa5.43□□□□□ -1.54
SMARCD2-208ENST00000580054 LYRM7Q5U5X0 104 aa5.43□□□□□ -1.54
SMARCD2-208ENST00000580054 LINC00167Q96N53 147 aa5.43□□□□□ -1.54
SMARCD2-208ENST00000580054 TRAV23DV6A0A075B6W5 121 aa5.42□□□□□ -1.54
SMARCD2-208ENST00000580054 H7C2G1 150 aa5.42□□□□□ -1.54
SMARCD2-208ENST00000580054 PRYO14603 147 aa5.42□□□□□ -1.54
SMARCD2-208ENST00000580054 IGLV6-57P01721 117 aa5.42□□□□□ -1.54
SMARCD2-208ENST00000580054 LINC00337Q8N6G1 96 aa5.42□□□□□ -1.54
SMARCD2-208ENST00000580054 SNHG12Q9BXW3 62 aa5.42□□□□□ -1.54
SMARCD2-208ENST00000580054 TRBV10-3A0A0K0K1G6 114 aa5.41□□□□□ -1.54
SMARCD2-208ENST00000580054 LINC01547P58512 204 aaPredicted RBP5.41□□□□□ -1.54
SMARCD2-208ENST00000580054 TPRXLQ17RH7 258 aa5.41□□□□□ -1.54
SMARCD2-208ENST00000580054 ETDCA0A1B0GVM5 59 aa5.4□□□□□ -1.54
SMARCD2-208ENST00000580054 RPL37AP8A6NKH3 93 aa5.4□□□□□ -1.54
SMARCD2-208ENST00000580054 SCGB1C2P0DMR2 95 aa5.4□□□□□ -1.54
SMARCD2-208ENST00000580054 Q8NDZ9 215 aa5.4□□□□□ -1.54
SMARCD2-208ENST00000580054 TYMSOSQ8TAI1 123 aa5.4□□□□□ -1.54
SMARCD2-208ENST00000580054 KCNQ1DNQ9H478 68 aa5.4□□□□□ -1.54
SMARCD2-208ENST00000580054 H0YGX0 51 aa5.39□□□□□ -1.55
SMARCD2-208ENST00000580054 K7ERJ3 54 aa5.39□□□□□ -1.55
SMARCD2-208ENST00000580054 SLC25A20O43772 301 aa5.39□□□□□ -1.55
SMARCD2-208ENST00000580054 ZNF73O43830 326 aaPredicted RBP5.39□□□□□ -1.55
SMARCD2-208ENST00000580054 RPL28P46779 137 aaKnown RBP5.39□□□□□ -1.55
SMARCD2-208ENST00000580054 SMIM11BQ8TCY0 68 aa5.39□□□□□ -1.55
SMARCD2-208ENST00000580054 KRTAP4-1Q9BYQ7 146 aa5.39□□□□□ -1.55
SMARCD2-208ENST00000580054 IGLV7-46A0A075B6I9 117 aa5.38□□□□□ -1.55
SMARCD2-208ENST00000580054 TRBV7-6A0A0J9YX20 115 aa5.38□□□□□ -1.55
SMARCD2-208ENST00000580054 CRYGAP11844 174 aa5.38□□□□□ -1.55
SMARCD2-208ENST00000580054 C9orf118A6NHY6 69 aa5.37□□□□□ -1.55
SMARCD2-208ENST00000580054 BCE1O60756 84 aa5.37□□□□□ -1.55
SMARCD2-208ENST00000580054 UBE2AP49459 152 aa5.37□□□□□ -1.55
SMARCD2-208ENST00000580054 C6orf99Q4VX62 202 aa5.37□□□□□ -1.55
SMARCD2-208ENST00000580054 H3BUT2 72 aa5.36□□□□□ -1.55
SMARCD2-208ENST00000580054 GHRHP01286 108 aa5.36□□□□□ -1.55
SMARCD2-208ENST00000580054 FABP2P12104 132 aa5.36□□□□□ -1.55
SMARCD2-208ENST00000580054 COX7BP24311 80 aa5.36□□□□□ -1.55
SMARCD2-208ENST00000580054 FAM19A1Q7Z5A9 133 aa5.36□□□□□ -1.55
SMARCD2-208ENST00000580054 ANAPC11Q9NYG5 84 aa5.36□□□□□ -1.55
SMARCD2-208ENST00000580054 TRBV20-1A0A075B6N2 111 aa5.35□□□□□ -1.55
SMARCD2-208ENST00000580054 TAX1BP3O14907 124 aa5.35□□□□□ -1.55
SMARCD2-208ENST00000580054 SPRR1AP35321 89 aa5.35□□□□□ -1.55
SMARCD2-208ENST00000580054 KRTAP13-2Q52LG2 175 aa5.35□□□□□ -1.55
SMARCD2-208ENST00000580054 DHRS4-AS1Q9P1J3 65 aa5.35□□□□□ -1.55
SMARCD2-208ENST00000580054 A0A1B0GX51 115 aa5.34□□□□□ -1.55
SMARCD2-208ENST00000580054 TRIAP1O43715 76 aa5.34□□□□□ -1.55
SMARCD2-208ENST00000580054 LINC00304Q8N9R0 145 aa5.34□□□□□ -1.55
SMARCD2-208ENST00000580054 DNAL4O96015 105 aa5.33□□□□□ -1.56
SMARCD2-208ENST00000580054 ELOF1P60002 83 aaKnown RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms