RNA–Protein interactions for RNA: ENST00000578412.1

TOP2A-204, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 882 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-204ENST00000578412 ZNF25P17030 456 aaPredicted RBP2.04□□□□□ -2.08
TOP2A-204ENST00000578412 KRTAP20-1Q3LI63 56 aa2.04□□□□□ -2.08
TOP2A-204ENST00000578412 KRTAP5-7Q6L8G8 165 aa2.04□□□□□ -2.08
TOP2A-204ENST00000578412 DEDD2Q8WXF8 326 aa2.04□□□□□ -2.08
TOP2A-204ENST00000578412 Q9H521 79 aa2.04□□□□□ -2.08
TOP2A-204ENST00000578412 SPANXA1Q9NS26 97 aa2.04□□□□□ -2.08
TOP2A-204ENST00000578412 R4GN34 69 aa2.04□□□□□ -2.08
TOP2A-204ENST00000578412 USH2AO75445 5202 aa2.04□□□□□ -2.08
TOP2A-204ENST00000578412 HMCN1Q96RW7 5635 aa2.03□□□□□ -2.08
TOP2A-204ENST00000578412 LINC00959A0A1B0GUT2 108 aa2.03□□□□□ -2.08
TOP2A-204ENST00000578412 A0A1W2PRE2 83 aa2.03□□□□□ -2.08
TOP2A-204ENST00000578412 C1orf196B1AJZ1 125 aa2.03□□□□□ -2.08
TOP2A-204ENST00000578412 NDUFA1O15239 70 aa2.03□□□□□ -2.08
TOP2A-204ENST00000578412 ZNF73O43830 326 aaPredicted RBP2.03□□□□□ -2.08
TOP2A-204ENST00000578412 NCR2O95944 276 aa2.03□□□□□ -2.08
TOP2A-204ENST00000578412 AQP4P55087 323 aa2.03□□□□□ -2.08
TOP2A-204ENST00000578412 LSM3P62310 102 aaKnown RBP2.03□□□□□ -2.08
TOP2A-204ENST00000578412 MBD3L1Q8WWY6 194 aa2.03□□□□□ -2.08
TOP2A-204ENST00000578412 AP1S3Q96PC3 154 aa2.03□□□□□ -2.08
TOP2A-204ENST00000578412 CCDC32Q9BV29 185 aa2.03□□□□□ -2.08
TOP2A-204ENST00000578412 MRPL35Q9NZE8 188 aaKnown RBP2.03□□□□□ -2.08
TOP2A-204ENST00000578412 ZFP30Q9Y2G7 519 aa2.03□□□□□ -2.08
TOP2A-204ENST00000578412 NEBP20929 6669 aa2.02□□□□□ -2.09
TOP2A-204ENST00000578412 C9orf170A2RU37 121 aa2.02□□□□□ -2.09
TOP2A-204ENST00000578412 G3V3Q6 166 aa2.02□□□□□ -2.09
TOP2A-204ENST00000578412 BCE1O60756 84 aa2.02□□□□□ -2.09
TOP2A-204ENST00000578412 SPINK1P00995 79 aa2.02□□□□□ -2.09
TOP2A-204ENST00000578412 NEDD8Q15843 81 aa2.02□□□□□ -2.09
TOP2A-204ENST00000578412 KTN1-AS1Q86SY8 53 aa2.02□□□□□ -2.09
TOP2A-204ENST00000578412 TOMM5Q8N4H5 51 aa2.02□□□□□ -2.09
TOP2A-204ENST00000578412 NIT2Q9NQR4 276 aa2.02□□□□□ -2.09
TOP2A-204ENST00000578412 LAMTOR3Q9UHA4 124 aa2.02□□□□□ -2.09
TOP2A-204ENST00000578412 NAT8Q9UHE5 227 aa2.02□□□□□ -2.09
TOP2A-204ENST00000578412 EPDR1Q9UM22 224 aa2.02□□□□□ -2.09
TOP2A-204ENST00000578412 MUC17Q685J3 4493 aa2.02□□□□□ -2.09
TOP2A-204ENST00000578412 H3BT86 120 aa2.01□□□□□ -2.09
TOP2A-204ENST00000578412 M0QY20 66 aa2.01□□□□□ -2.09
TOP2A-204ENST00000578412 MGPP08493 103 aa2.01□□□□□ -2.09
TOP2A-204ENST00000578412 CXCL1P09341 107 aa2.01□□□□□ -2.09
TOP2A-204ENST00000578412 NCS1P62166 190 aa2.01□□□□□ -2.09
TOP2A-204ENST00000578412 KRTAP19-2Q3LHN2 52 aa2.01□□□□□ -2.09
TOP2A-204ENST00000578412 KRTAP13-2Q52LG2 175 aa2.01□□□□□ -2.09
TOP2A-204ENST00000578412 TMEM167BQ9NRX6 74 aa2.01□□□□□ -2.09
TOP2A-204ENST00000578412 ARL2-SNX15V9GYD0 113 aa2.01□□□□□ -2.09
TOP2A-204ENST00000578412 TMSB15BA0A087X1C1 80 aa2□□□□□ -2.09
TOP2A-204ENST00000578412 C11orf86A6NJI1 115 aa2□□□□□ -2.09
TOP2A-204ENST00000578412 TAX1BP3O14907 124 aa2□□□□□ -2.09
TOP2A-204ENST00000578412 HRES1P13985 223 aa2□□□□□ -2.09
TOP2A-204ENST00000578412 UBE2G1P62253 170 aa2□□□□□ -2.09
TOP2A-204ENST00000578412 SPAG11BQ08648 103 aa2□□□□□ -2.09
TOP2A-204ENST00000578412 LINC01554Q52M75 96 aa2□□□□□ -2.09
TOP2A-204ENST00000578412 PYDC2Q56P42 97 aa2□□□□□ -2.09
TOP2A-204ENST00000578412 PCOTHQ58A44 107 aa2□□□□□ -2.09
TOP2A-204ENST00000578412 LYZL1Q6UWQ5 148 aa2□□□□□ -2.09
TOP2A-204ENST00000578412 HIST3H2BBQ8N257 126 aa2□□□□□ -2.09
TOP2A-204ENST00000578412 SCGB3A1Q96QR1 104 aa2□□□□□ -2.09
TOP2A-204ENST00000578412 OSTCQ9NRP0 149 aa2□□□□□ -2.09
TOP2A-204ENST00000578412 TRAV7A0A075B6U4 112 aa1.99□□□□□ -2.09
TOP2A-204ENST00000578412 NAP1L6A6NFF2 107 aa1.99□□□□□ -2.09
TOP2A-204ENST00000578412 ARPC5O15511 151 aa1.99□□□□□ -2.09
TOP2A-204ENST00000578412 NDUFB6O95139 128 aa1.99□□□□□ -2.09
TOP2A-204ENST00000578412 TRGC1P0CF51 173 aa1.99□□□□□ -2.09
TOP2A-204ENST00000578412 TEX261Q6UWH6 196 aa1.99□□□□□ -2.09
TOP2A-204ENST00000578412 OR10AG1Q8NH19 301 aa1.99□□□□□ -2.09
TOP2A-204ENST00000578412 SPANXCQ9NY87 97 aa1.99□□□□□ -2.09
TOP2A-204ENST00000578412 C22orf24Q9Y442 160 aa1.99□□□□□ -2.09
TOP2A-204ENST00000578412 A0A087WXM4 84 aa1.98□□□□□ -2.09
TOP2A-204ENST00000578412 TRBV30A0A0K0K1B3 111 aa1.98□□□□□ -2.09
TOP2A-204ENST00000578412 F2Z2F3 143 aa1.98□□□□□ -2.09
TOP2A-204ENST00000578412 PPBPP02775 128 aa1.98□□□□□ -2.09
TOP2A-204ENST00000578412 ARL14EPLP0DKL9 152 aa1.98□□□□□ -2.09
TOP2A-204ENST00000578412 RPS29P62273 56 aaKnown RBP1.98□□□□□ -2.09
TOP2A-204ENST00000578412 TCEAL7Q9BRU2 100 aa1.98□□□□□ -2.09
TOP2A-204ENST00000578412 CDC42SE2Q9NRR3 84 aa1.98□□□□□ -2.09
TOP2A-204ENST00000578412 LAMTOR2Q9Y2Q5 125 aa1.98□□□□□ -2.09
TOP2A-204ENST00000578412 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.97□□□□□ -2.09
TOP2A-204ENST00000578412 IGKV2-29A2NJV5 120 aaPredicted RBP1.97□□□□□ -2.09
TOP2A-204ENST00000578412 H7C2G1 150 aa1.97□□□□□ -2.09
TOP2A-204ENST00000578412 I3L3M4 83 aa1.97□□□□□ -2.09
TOP2A-204ENST00000578412 M0R378 163 aa1.97□□□□□ -2.09
TOP2A-204ENST00000578412 GCHFRP30047 84 aa1.97□□□□□ -2.09
TOP2A-204ENST00000578412 CRIP1P50238 77 aa1.97□□□□□ -2.09
TOP2A-204ENST00000578412 C5orf38Q86SI9 138 aa1.97□□□□□ -2.09
TOP2A-204ENST00000578412 Q86TA4 180 aa1.97□□□□□ -2.09
TOP2A-204ENST00000578412 HIST1H2BLQ99880 126 aa1.97□□□□□ -2.09
TOP2A-204ENST00000578412 TRAV13-1A0A0B4J241 112 aa1.96□□□□□ -2.1
TOP2A-204ENST00000578412 MUC21A0A140T8X8 626 aa1.96□□□□□ -2.1
TOP2A-204ENST00000578412 SPRR5A0A1B0GTR4 108 aa1.96□□□□□ -2.1
TOP2A-204ENST00000578412 A0A1W2PNM2 257 aa1.96□□□□□ -2.1
TOP2A-204ENST00000578412 ZNF727A8MUV8 499 aa1.96□□□□□ -2.1
TOP2A-204ENST00000578412 TCL1BO95988 128 aa1.96□□□□□ -2.1
TOP2A-204ENST00000578412 TRGC2P03986 189 aa1.96□□□□□ -2.1
TOP2A-204ENST00000578412 FXYD2P54710 66 aa1.96□□□□□ -2.1
TOP2A-204ENST00000578412 RPS28P62857 69 aaKnown RBP1.96□□□□□ -2.1
TOP2A-204ENST00000578412 IGFL1Q6UW32 110 aa1.96□□□□□ -2.1
TOP2A-204ENST00000578412 UNQ6190/PRO20217Q6UXQ8 127 aa1.96□□□□□ -2.1
TOP2A-204ENST00000578412 Q8NDZ9 215 aa1.96□□□□□ -2.1
TOP2A-204ENST00000578412 C6orf48Q9UBA6 75 aa1.96□□□□□ -2.1
TOP2A-204ENST00000578412 TRBV10-2A0A0K0K1G8 114 aa1.95□□□□□ -2.1
TOP2A-204ENST00000578412 J3KT08 172 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms