RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 J3QQQ9 107 aa3.68□□□□□ -1.82
NUP88-212ENST00000576708 ZNF861PO60384 105 aa3.68□□□□□ -1.82
NUP88-212ENST00000576708 MT-ND4LP03901 98 aa3.68□□□□□ -1.82
NUP88-212ENST00000576708 ADCYAP1P18509 176 aa3.68□□□□□ -1.82
NUP88-212ENST00000576708 ORMDL2Q53FV1 153 aa3.68□□□□□ -1.82
NUP88-212ENST00000576708 FAM19A3Q7Z5A8 133 aa3.68□□□□□ -1.82
NUP88-212ENST00000576708 Q8IZM0 81 aa3.68□□□□□ -1.82
NUP88-212ENST00000576708 PRAC1Q96KF2 57 aa3.68□□□□□ -1.82
NUP88-212ENST00000576708 NAA38Q9BRA0 125 aaKnown RBP3.68□□□□□ -1.82
NUP88-212ENST00000576708 A0A087X002 238 aa3.67□□□□□ -1.82
NUP88-212ENST00000576708 A0A1B0GWB2 263 aa3.67□□□□□ -1.82
NUP88-212ENST00000576708 RPL37AP8A6NKH3 93 aa3.67□□□□□ -1.82
NUP88-212ENST00000576708 CCDC179H3BU77 68 aa3.67□□□□□ -1.82
NUP88-212ENST00000576708 BATFQ16520 125 aa3.67□□□□□ -1.82
NUP88-212ENST00000576708 SVBPQ8N300 66 aa3.67□□□□□ -1.82
NUP88-212ENST00000576708 ANAPC11Q9NYG5 84 aa3.67□□□□□ -1.82
NUP88-212ENST00000576708 RBM12B-AS1Q9P1G2 102 aa3.67□□□□□ -1.82
NUP88-212ENST00000576708 COLCA2A8K830 154 aa3.66□□□□□ -1.82
NUP88-212ENST00000576708 F8VRH5 84 aa3.66□□□□□ -1.82
NUP88-212ENST00000576708 J3QR89 54 aa3.66□□□□□ -1.82
NUP88-212ENST00000576708 APOC3P02656 99 aa3.66□□□□□ -1.82
NUP88-212ENST00000576708 HERVK_113P63121 156 aa3.66□□□□□ -1.82
NUP88-212ENST00000576708 SCGB1D4Q6XE38 83 aa3.66□□□□□ -1.82
NUP88-212ENST00000576708 NOTCH2NLQ7Z3S9 236 aa3.66□□□□□ -1.82
NUP88-212ENST00000576708 TOMM6Q96B49 74 aa3.66□□□□□ -1.82
NUP88-212ENST00000576708 LINC00167Q96N53 147 aa3.66□□□□□ -1.82
NUP88-212ENST00000576708 MIEN1Q9BRT3 115 aa3.66□□□□□ -1.82
NUP88-212ENST00000576708 NXT2Q9NPJ8 142 aaKnown RBP3.66□□□□□ -1.82
NUP88-212ENST00000576708 NUPR1O60356 82 aa3.65□□□□□ -1.83
NUP88-212ENST00000576708 BCE1O60756 84 aa3.65□□□□□ -1.83
NUP88-212ENST00000576708 DPM2O94777 84 aa3.65□□□□□ -1.83
NUP88-212ENST00000576708 SPINK8P0C7L1 97 aa3.65□□□□□ -1.83
NUP88-212ENST00000576708 KRTAP10-6P60371 365 aaPredicted RBP3.65□□□□□ -1.83
NUP88-212ENST00000576708 C10orf91Q5T1B1 145 aa3.65□□□□□ -1.83
NUP88-212ENST00000576708 COX7B2Q8TF08 81 aa3.65□□□□□ -1.83
NUP88-212ENST00000576708 SCGB3A1Q96QR1 104 aa3.65□□□□□ -1.83
NUP88-212ENST00000576708 TIMM17AQ99595 171 aa3.65□□□□□ -1.83
NUP88-212ENST00000576708 MUC2Q02817 5179 aa3.65□□□□□ -1.83
NUP88-212ENST00000576708 K7EMI3 77 aa3.64□□□□□ -1.83
NUP88-212ENST00000576708 RPL28P46779 137 aaKnown RBP3.64□□□□□ -1.83
NUP88-212ENST00000576708 SEC11AP67812 179 aa3.64□□□□□ -1.83
NUP88-212ENST00000576708 KRTAP13-2Q52LG2 175 aa3.64□□□□□ -1.83
NUP88-212ENST00000576708 HIST3H2BBQ8N257 126 aa3.64□□□□□ -1.83
NUP88-212ENST00000576708 ANKRD29Q8N6D5 301 aa3.64□□□□□ -1.83
NUP88-212ENST00000576708 TP73-AS1Q9UF72 201 aa3.64□□□□□ -1.83
NUP88-212ENST00000576708 CXCL5P42830 114 aa3.63□□□□□ -1.83
NUP88-212ENST00000576708 MEIG1Q5JSS6 88 aa3.63□□□□□ -1.83
NUP88-212ENST00000576708 KRTAP13-1Q8IUC0 172 aa3.63□□□□□ -1.83
NUP88-212ENST00000576708 TYMSOSQ8TAI1 123 aa3.63□□□□□ -1.83
NUP88-212ENST00000576708 RETNLBQ9BQ08 111 aa3.63□□□□□ -1.83
NUP88-212ENST00000576708 IGKV2-28A0A075B6P5 120 aa3.62□□□□□ -1.83
NUP88-212ENST00000576708 IGKV2D-28P01615 120 aa3.62□□□□□ -1.83
NUP88-212ENST00000576708 CRYGAP11844 174 aa3.62□□□□□ -1.83
NUP88-212ENST00000576708 UBE2AP49459 152 aa3.62□□□□□ -1.83
NUP88-212ENST00000576708 Q6Q795 121 aa3.62□□□□□ -1.83
NUP88-212ENST00000576708 PRR15Q8IV56 129 aa3.62□□□□□ -1.83
NUP88-212ENST00000576708 Q8NDZ9 215 aa3.62□□□□□ -1.83
NUP88-212ENST00000576708 MUC17Q685J3 4493 aa3.62□□□□□ -1.83
NUP88-212ENST00000576708 FAT4Q6V0I7 4981 aa3.62□□□□□ -1.83
NUP88-212ENST00000576708 LINC01546A6NGU7 62 aa3.61□□□□□ -1.83
NUP88-212ENST00000576708 NDUFS5O43920 106 aa3.61□□□□□ -1.83
NUP88-212ENST00000576708 NDUFV3P56181 108 aaKnown RBP3.61□□□□□ -1.83
NUP88-212ENST00000576708 PRLHP81277 87 aa3.61□□□□□ -1.83
NUP88-212ENST00000576708 ADAMTSL4-AS1Q5T5F5 129 aa3.61□□□□□ -1.83
NUP88-212ENST00000576708 NKAPP1Q8N9T2 125 aa3.61□□□□□ -1.83
NUP88-212ENST00000576708 ZNF625Q96I27 306 aaPredicted RBP3.61□□□□□ -1.83
NUP88-212ENST00000576708 FAM218AQ96MZ4 157 aa3.61□□□□□ -1.83
NUP88-212ENST00000576708 SMCO4Q9NRQ5 59 aa3.61□□□□□ -1.83
NUP88-212ENST00000576708 LAMTOR3Q9UHA4 124 aa3.61□□□□□ -1.83
NUP88-212ENST00000576708 A0A096LNJ9 63 aa3.6□□□□□ -1.83
NUP88-212ENST00000576708 FAM236AA0A1B0GUQ0 79 aa3.6□□□□□ -1.83
NUP88-212ENST00000576708 FAM236BA0A1B0GV22 79 aa3.6□□□□□ -1.83
NUP88-212ENST00000576708 LYRM7Q5U5X0 104 aa3.6□□□□□ -1.83
NUP88-212ENST00000576708 SND1-IT1Q9HBX3 110 aa3.6□□□□□ -1.83
NUP88-212ENST00000576708 TRAV9-1A0A075B6T8 112 aa3.59□□□□□ -1.83
NUP88-212ENST00000576708 H3BRM9 83 aa3.59□□□□□ -1.83
NUP88-212ENST00000576708 IGLC3P0DOY3 106 aa3.59□□□□□ -1.83
NUP88-212ENST00000576708 ZNF22P17026 224 aaPredicted RBP3.59□□□□□ -1.83
NUP88-212ENST00000576708 NMUP48645 174 aa3.59□□□□□ -1.83
NUP88-212ENST00000576708 PMCHL1Q16048 86 aa3.59□□□□□ -1.83
NUP88-212ENST00000576708 C3orf22Q8N5N4 141 aa3.59□□□□□ -1.83
NUP88-212ENST00000576708 LINC00337Q8N6G1 96 aa3.59□□□□□ -1.83
NUP88-212ENST00000576708 LINC00304Q8N9R0 145 aa3.59□□□□□ -1.83
NUP88-212ENST00000576708 C11orf86A6NJI1 115 aa3.58□□□□□ -1.84
NUP88-212ENST00000576708 M0R378 163 aa3.58□□□□□ -1.84
NUP88-212ENST00000576708 FAM229BQ4G0N7 80 aa3.58□□□□□ -1.84
NUP88-212ENST00000576708 HIST1H2BLQ99880 126 aa3.58□□□□□ -1.84
NUP88-212ENST00000576708 VAMP8Q9BV40 100 aa3.58□□□□□ -1.84
NUP88-212ENST00000576708 IGKV2D-26A0A0A0MRZ7 120 aa3.57□□□□□ -1.84
NUP88-212ENST00000576708 LINC01549A6NIU2 74 aa3.57□□□□□ -1.84
NUP88-212ENST00000576708 E9PLD3 99 aa3.57□□□□□ -1.84
NUP88-212ENST00000576708 TMEM258P61165 79 aa3.57□□□□□ -1.84
NUP88-212ENST00000576708 KTN1-AS1Q86SY8 53 aa3.57□□□□□ -1.84
NUP88-212ENST00000576708 BAGE3Q86Y29 109 aa3.57□□□□□ -1.84
NUP88-212ENST00000576708 C18orf32Q8TCD1 76 aa3.57□□□□□ -1.84
NUP88-212ENST00000576708 SEC11CQ9BY50 192 aa3.57□□□□□ -1.84
NUP88-212ENST00000576708 RPS10P5Q9NQ39 176 aa3.57□□□□□ -1.84
NUP88-212ENST00000576708 IGLV7-46A0A075B6I9 117 aa3.56□□□□□ -1.84
NUP88-212ENST00000576708 TRBV7-6A0A0J9YX20 115 aa3.56□□□□□ -1.84
NUP88-212ENST00000576708 HBDP02042 147 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms