RNA–Protein interactions for RNA: ENST00000576484.1

CDC27-219, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-219ENST00000576484 PTPN23Q9H3S7 1636 aa-0.38□□□□□ -2.47
CDC27-219ENST00000576484 PEA15Q15121 130 aa-0.38□□□□□ -2.47
CDC27-219ENST00000576484 NMSQ5H8A3 153 aa-0.38□□□□□ -2.47
CDC27-219ENST00000576484 C9orf62Q8N4C0 152 aa-0.38□□□□□ -2.47
CDC27-219ENST00000576484 CDKN2A-AS1Q9UH64 79 aa-0.38□□□□□ -2.47
CDC27-219ENST00000576484 MAGI2Q86UL8 1455 aa-0.38□□□□□ -2.47
CDC27-219ENST00000576484 HTTP42858 3142 aa-0.38□□□□□ -2.47
CDC27-219ENST00000576484 KIF20BQ96Q89 1820 aa-0.38□□□□□ -2.47
CDC27-219ENST00000576484 MUC17Q685J3 4493 aa-0.39□□□□□ -2.47
CDC27-219ENST00000576484 COL14A1Q05707 1796 aaKnown RBP-0.39□□□□□ -2.47
CDC27-219ENST00000576484 HEPN1Q6WQI6 88 aa-0.39□□□□□ -2.47
CDC27-219ENST00000576484 PKHD1L1Q86WI1 4243 aa-0.39□□□□□ -2.47
CDC27-219ENST00000576484 CREBBPQ92793 2442 aa-0.39□□□□□ -2.47
CDC27-219ENST00000576484 PRRC2CQ9Y520 2896 aaKnown RBP-0.39□□□□□ -2.47
CDC27-219ENST00000576484 EPPK1P58107 5090 aaKnown RBP-0.4□□□□□ -2.47
CDC27-219ENST00000576484 COX7BP24311 80 aa-0.4□□□□□ -2.47
CDC27-219ENST00000576484 PYY3Q5JQD4 70 aa-0.4□□□□□ -2.47
CDC27-219ENST00000576484 LELP1Q5T871 98 aa-0.4□□□□□ -2.47
CDC27-219ENST00000576484 SPRR2FQ96RM1 72 aa-0.4□□□□□ -2.47
CDC27-219ENST00000576484 MYO3AQ8NEV4 1616 aa-0.4□□□□□ -2.47
CDC27-219ENST00000576484 ALKQ9UM73 1620 aa-0.4□□□□□ -2.47
CDC27-219ENST00000576484 KNL1Q8NG31 2342 aa-0.4□□□□□ -2.47
CDC27-219ENST00000576484 DNAH3Q8TD57 4116 aa-0.4□□□□□ -2.47
CDC27-219ENST00000576484 ATP7BP35670 1465 aa-0.41□□□□□ -2.47
CDC27-219ENST00000576484 PKD1L3Q7Z443 1732 aa-0.41□□□□□ -2.47
CDC27-219ENST00000576484 A0A1B0GUT8 65 aa-0.41□□□□□ -2.48
CDC27-219ENST00000576484 MT1AP04731 61 aa-0.41□□□□□ -2.48
CDC27-219ENST00000576484 PLGLAQ15195 96 aa-0.41□□□□□ -2.48
CDC27-219ENST00000576484 VPS13DQ5THJ4 4388 aa-0.41□□□□□ -2.48
CDC27-219ENST00000576484 ANK3Q12955 4377 aaKnown RBP-0.42□□□□□ -2.48
CDC27-219ENST00000576484 NEXMIFQ5QGS0 1516 aa-0.42□□□□□ -2.48
CDC27-219ENST00000576484 Q9H521 79 aa-0.42□□□□□ -2.48
CDC27-219ENST00000576484 V9GYS6 101 aa-0.42□□□□□ -2.48
CDC27-219ENST00000576484 APOBP04114 4563 aaKnown RBP-0.42□□□□□ -2.48
CDC27-219ENST00000576484 QSER1Q2KHR3 1735 aa-0.42□□□□□ -2.48
CDC27-219ENST00000576484 HECTD1Q9ULT8 2610 aa-0.42□□□□□ -2.48
CDC27-219ENST00000576484 CICQ96RK0 1608 aaPredicted RBP-0.42□□□□□ -2.48
CDC27-219ENST00000576484 BCORQ6W2J9 1755 aa-0.42□□□□□ -2.48
CDC27-219ENST00000576484 MXRA5Q9NR99 2828 aa-0.42□□□□□ -2.48
CDC27-219ENST00000576484 DNAH9Q9NYC9 4486 aa-0.42□□□□□ -2.48
CDC27-219ENST00000576484 WFDC13Q8IUB5 93 aa-0.43□□□□□ -2.48
CDC27-219ENST00000576484 AKAP9Q99996 3911 aa-0.44□□□□□ -2.48
CDC27-219ENST00000576484 LAMA1P25391 3075 aa-0.44□□□□□ -2.48
CDC27-219ENST00000576484 NBPF19A0A087WUL8 3843 aa-0.44□□□□□ -2.48
CDC27-219ENST00000576484 BIRC6Q9NR09 4857 aa-0.44□□□□□ -2.48
CDC27-219ENST00000576484 HIVEP1P15822 2718 aa-0.44□□□□□ -2.48
CDC27-219ENST00000576484 IQCF6A8MYZ5 107 aa-0.44□□□□□ -2.48
CDC27-219ENST00000576484 H0YGG7 62 aa-0.44□□□□□ -2.48
CDC27-219ENST00000576484 CYB5AP00167 134 aa-0.44□□□□□ -2.48
CDC27-219ENST00000576484 COX6B2Q6YFQ2 88 aa-0.44□□□□□ -2.48
CDC27-219ENST00000576484 UBR3Q6ZT12 1888 aa-0.44□□□□□ -2.48
CDC27-219ENST00000576484 LRRC7Q96NW7 1537 aa-0.44□□□□□ -2.48
CDC27-219ENST00000576484 PLIN4Q96Q06 1357 aa-0.45□□□□□ -2.48
CDC27-219ENST00000576484 LYSTQ99698 3801 aa-0.45□□□□□ -2.48
CDC27-219ENST00000576484 PREX1Q8TCU6 1659 aa-0.45□□□□□ -2.48
CDC27-219ENST00000576484 RPL38P63173 70 aaKnown RBP-0.45□□□□□ -2.48
CDC27-219ENST00000576484 UBR1Q8IWV7 1749 aa-0.45□□□□□ -2.48
CDC27-219ENST00000576484 DNAH2Q9P225 4427 aa-0.45□□□□□ -2.48
CDC27-219ENST00000576484 RGPD2P0DJD1 1756 aa-0.45□□□□□ -2.48
CDC27-219ENST00000576484 TTC37Q6PGP7 1564 aa-0.45□□□□□ -2.48
CDC27-219ENST00000576484 RYR2Q92736 4967 aa-0.45□□□□□ -2.48
CDC27-219ENST00000576484 VPS13BQ7Z7G8 4022 aa-0.46□□□□□ -2.48
CDC27-219ENST00000576484 LAMA2P24043 3122 aaKnown RBP-0.46□□□□□ -2.48
CDC27-219ENST00000576484 LRRC9Q6ZRR7 1453 aa-0.46□□□□□ -2.48
CDC27-219ENST00000576484 DNAH11Q96DT5 4516 aa-0.46□□□□□ -2.48
CDC27-219ENST00000576484 MYMXA0A1B0GTQ4 84 aa-0.46□□□□□ -2.48
CDC27-219ENST00000576484 PVALEFA0A1B0GWK0 134 aa-0.46□□□□□ -2.48
CDC27-219ENST00000576484 K7EP34 96 aa-0.46□□□□□ -2.48
CDC27-219ENST00000576484 GAFA1Q96PS6 74 aa-0.46□□□□□ -2.48
CDC27-219ENST00000576484 SPTBN4Q9H254 2564 aa-0.46□□□□□ -2.48
CDC27-219ENST00000576484 RGPD4Q7Z3J3 1758 aa-0.47□□□□□ -2.48
CDC27-219ENST00000576484 ABCC3O15438 1527 aa-0.47□□□□□ -2.48
CDC27-219ENST00000576484 TRIOO75962 3097 aa-0.47□□□□□ -2.48
CDC27-219ENST00000576484 C9orf92A6NGG3 77 aa-0.47□□□□□ -2.48
CDC27-219ENST00000576484 SNRPFP62306 86 aaKnown RBP-0.47□□□□□ -2.48
CDC27-219ENST00000576484 S100A16Q96FQ6 103 aaKnown RBP-0.47□□□□□ -2.48
CDC27-219ENST00000576484 CUBNO60494 3623 aa-0.47□□□□□ -2.48
CDC27-219ENST00000576484 RGPD1P0DJD0 1748 aa-0.47□□□□□ -2.49
CDC27-219ENST00000576484 SONP18583 2426 aaKnown RBP-0.47□□□□□ -2.49
CDC27-219ENST00000576484 RNF213Q63HN8 5207 aa-0.47□□□□□ -2.49
CDC27-219ENST00000576484 RGPD8O14715 1765 aaPredicted RBP-0.47□□□□□ -2.49
CDC27-219ENST00000576484 RGPD5Q99666 1765 aa-0.47□□□□□ -2.49
CDC27-219ENST00000576484 TACC2O95359 2948 aa-0.48□□□□□ -2.49
CDC27-219ENST00000576484 H3BNG1 76 aa-0.48□□□□□ -2.49
CDC27-219ENST00000576484 C4AP0C0L4 1744 aa-0.48□□□□□ -2.49
CDC27-219ENST00000576484 C4BP0C0L5 1744 aa-0.48□□□□□ -2.49
CDC27-219ENST00000576484 TIAM2Q8IVF5 1701 aa-0.48□□□□□ -2.49
CDC27-219ENST00000576484 NBASA2RRP1 2371 aa-0.48□□□□□ -2.49
CDC27-219ENST00000576484 TNRC18O15417 2968 aaPredicted RBP-0.48□□□□□ -2.49
CDC27-219ENST00000576484 EPG5Q9HCE0 2579 aa-0.49□□□□□ -2.49
CDC27-219ENST00000576484 PLXNC1O60486 1568 aa-0.49□□□□□ -2.49
CDC27-219ENST00000576484 PDE4DIPQ5VU43 2346 aa-0.49□□□□□ -2.49
CDC27-219ENST00000576484 LINC00643Q86TS7 51 aa-0.49□□□□□ -2.49
CDC27-219ENST00000576484 RABAC1Q9UI14 185 aa-0.49□□□□□ -2.49
CDC27-219ENST00000576484 TEP1Q99973 2627 aaKnown RBP-0.49□□□□□ -2.49
CDC27-219ENST00000576484 LAMA3Q16787 3333 aa-0.49□□□□□ -2.49
CDC27-219ENST00000576484 PLECQ15149 4684 aaKnown RBP-0.49□□□□□ -2.49
CDC27-219ENST00000576484 ANKRD50Q9ULJ7 1429 aa-0.49□□□□□ -2.49
CDC27-219ENST00000576484 DNAH1Q9P2D7 4330 aa-0.49□□□□□ -2.49
CDC27-219ENST00000576484 MAP3K1Q13233 1512 aa-0.49□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms