RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 MT1HL1P0DM35 61 aa3.45□□□□□ -1.86
SF3B3-214ENST00000572365 NDUFA4L2Q9NRX3 87 aa3.45□□□□□ -1.86
SF3B3-214ENST00000572365 TRBV19A0A075B6N1 114 aa3.44□□□□□ -1.86
SF3B3-214ENST00000572365 IGKV1OR2-108A0A075B7D4 117 aa3.44□□□□□ -1.86
SF3B3-214ENST00000572365 LEPROTO15243 131 aa3.44□□□□□ -1.86
SF3B3-214ENST00000572365 KRTAP10-4P60372 401 aaPredicted RBP3.44□□□□□ -1.86
SF3B3-214ENST00000572365 Q6JHZ5 121 aa3.44□□□□□ -1.86
SF3B3-214ENST00000572365 KRTAP5-1Q6L8H4 278 aa3.44□□□□□ -1.86
SF3B3-214ENST00000572365 HRCT1Q6UXD1 115 aa3.44□□□□□ -1.86
SF3B3-214ENST00000572365 PATE2Q6UY27 113 aa3.44□□□□□ -1.86
SF3B3-214ENST00000572365 C1orf158Q8N1D5 194 aa3.44□□□□□ -1.86
SF3B3-214ENST00000572365 TMEM167AQ8TBQ9 72 aa3.44□□□□□ -1.86
SF3B3-214ENST00000572365 TMEM263Q8WUH6 116 aaKnown RBP3.44□□□□□ -1.86
SF3B3-214ENST00000572365 TIMM17AQ99595 171 aa3.44□□□□□ -1.86
SF3B3-214ENST00000572365 SMIM2Q9BVW6 85 aa3.44□□□□□ -1.86
SF3B3-214ENST00000572365 DPH3P1Q9H4G8 78 aa3.44□□□□□ -1.86
SF3B3-214ENST00000572365 ICOSQ9Y6W8 199 aa3.44□□□□□ -1.86
SF3B3-214ENST00000572365 MUC2Q02817 5179 aa3.44□□□□□ -1.86
SF3B3-214ENST00000572365 FAT4Q6V0I7 4981 aa3.44□□□□□ -1.86
SF3B3-214ENST00000572365 FAM236DA0A1B0GTK5 79 aa3.43□□□□□ -1.86
SF3B3-214ENST00000572365 A8MU10 97 aa3.43□□□□□ -1.86
SF3B3-214ENST00000572365 TIMM17BO60830 172 aa3.43□□□□□ -1.86
SF3B3-214ENST00000572365 SH2D1AO60880 128 aa3.43□□□□□ -1.86
SF3B3-214ENST00000572365 FAM236CP0DP71 79 aa3.43□□□□□ -1.86
SF3B3-214ENST00000572365 CIRBPQ14011 172 aaKnown RBP3.43□□□□□ -1.86
SF3B3-214ENST00000572365 Q5XG85 94 aa3.43□□□□□ -1.86
SF3B3-214ENST00000572365 LENEPQ9Y5L5 61 aa3.43□□□□□ -1.86
SF3B3-214ENST00000572365 K7EIM0 57 aa3.42□□□□□ -1.86
SF3B3-214ENST00000572365 DNAL4O96015 105 aa3.42□□□□□ -1.86
SF3B3-214ENST00000572365 HTN1P15515 57 aa3.42□□□□□ -1.86
SF3B3-214ENST00000572365 CD164Q04900 197 aa3.42□□□□□ -1.86
SF3B3-214ENST00000572365 ERCC8Q13216 396 aa3.42□□□□□ -1.86
SF3B3-214ENST00000572365 C4orf26Q17RF5 130 aa3.42□□□□□ -1.86
SF3B3-214ENST00000572365 RNF185Q96GF1 192 aa3.42□□□□□ -1.86
SF3B3-214ENST00000572365 TMEM243Q9BU79 118 aa3.42□□□□□ -1.86
SF3B3-214ENST00000572365 TTTY13Q9BZ97 58 aa3.42□□□□□ -1.86
SF3B3-214ENST00000572365 A0A096LPF7 62 aa3.41□□□□□ -1.86
SF3B3-214ENST00000572365 A0A0U1RQV1 116 aa3.41□□□□□ -1.86
SF3B3-214ENST00000572365 TMEM223A0PJW6 202 aa3.41□□□□□ -1.86
SF3B3-214ENST00000572365 LYRM9A8MSI8 78 aa3.41□□□□□ -1.86
SF3B3-214ENST00000572365 F6UB75 175 aa3.41□□□□□ -1.86
SF3B3-214ENST00000572365 WT1-ASQ06250 92 aa3.41□□□□□ -1.86
SF3B3-214ENST00000572365 RNF182Q8N6D2 247 aa3.41□□□□□ -1.86
SF3B3-214ENST00000572365 DCANP1Q8TF63 244 aa3.41□□□□□ -1.86
SF3B3-214ENST00000572365 TIMM21Q9BVV7 248 aa3.41□□□□□ -1.86
SF3B3-214ENST00000572365 IGKV1D-37A0A075B6S9 117 aa3.4□□□□□ -1.87
SF3B3-214ENST00000572365 KRTAP4-16G5E9R7 235 aaPredicted RBP3.4□□□□□ -1.87
SF3B3-214ENST00000572365 H3BQ85 93 aa3.4□□□□□ -1.87
SF3B3-214ENST00000572365 H3BRN7 92 aa3.4□□□□□ -1.87
SF3B3-214ENST00000572365 COX7A2LO14548 114 aa3.4□□□□□ -1.87
SF3B3-214ENST00000572365 PMAIP1Q13794 54 aa3.4□□□□□ -1.87
SF3B3-214ENST00000572365 SPANXN1Q5VSR9 72 aa3.4□□□□□ -1.87
SF3B3-214ENST00000572365 LINC00477Q96M19 166 aa3.4□□□□□ -1.87
SF3B3-214ENST00000572365 UPK3BQ9BT76 320 aa3.4□□□□□ -1.87
SF3B3-214ENST00000572365 FSIP2Q5CZC0 6907 aa3.4□□□□□ -1.87
SF3B3-214ENST00000572365 TRAV7A0A075B6U4 112 aa3.39□□□□□ -1.87
SF3B3-214ENST00000572365 TRBV7-6A0A0J9YX20 115 aa3.39□□□□□ -1.87
SF3B3-214ENST00000572365 ZNF22P17026 224 aaPredicted RBP3.39□□□□□ -1.87
SF3B3-214ENST00000572365 DAZ2Q13117 558 aaKnown RBP3.39□□□□□ -1.87
SF3B3-214ENST00000572365 RHOHQ15669 191 aa3.39□□□□□ -1.87
SF3B3-214ENST00000572365 KLK9Q2XQG4 91 aa3.39□□□□□ -1.87
SF3B3-214ENST00000572365 SCXQ7RTU7 201 aa3.39□□□□□ -1.87
SF3B3-214ENST00000572365 MUSTN1Q8IVN3 82 aa3.39□□□□□ -1.87
SF3B3-214ENST00000572365 C20orf203Q8NBC4 194 aa3.39□□□□□ -1.87
SF3B3-214ENST00000572365 FAM19A4Q96LR4 140 aa3.39□□□□□ -1.87
SF3B3-214ENST00000572365 KLK9Q9UKQ9 250 aa3.39□□□□□ -1.87
SF3B3-214ENST00000572365 PKIGQ9Y2B9 76 aa3.39□□□□□ -1.87
SF3B3-214ENST00000572365 TRAV8-3A0A0A6YYJ7 113 aa3.38□□□□□ -1.87
SF3B3-214ENST00000572365 H0YGX0 51 aa3.38□□□□□ -1.87
SF3B3-214ENST00000572365 SMKR1H3BMG3 65 aa3.38□□□□□ -1.87
SF3B3-214ENST00000572365 LECT2O14960 151 aa3.38□□□□□ -1.87
SF3B3-214ENST00000572365 CRIP1P50238 77 aa3.38□□□□□ -1.87
SF3B3-214ENST00000572365 ZNF80P51504 273 aaPredicted RBP3.38□□□□□ -1.87
SF3B3-214ENST00000572365 KLKP1Q107X0 134 aa3.38□□□□□ -1.87
SF3B3-214ENST00000572365 MIAQ16674 131 aa3.38□□□□□ -1.87
SF3B3-214ENST00000572365 SFTA2Q6UW10 78 aa3.38□□□□□ -1.87
SF3B3-214ENST00000572365 MRPL55Q7Z7F7 128 aaKnown RBP3.38□□□□□ -1.87
SF3B3-214ENST00000572365 PRR15Q8IV56 129 aa3.38□□□□□ -1.87
SF3B3-214ENST00000572365 DSCR8Q96T75 97 aa3.38□□□□□ -1.87
SF3B3-214ENST00000572365 NOP10Q9NPE3 64 aaKnown RBP3.38□□□□□ -1.87
SF3B3-214ENST00000572365 CRCT1Q9UGL9 99 aa3.38□□□□□ -1.87
SF3B3-214ENST00000572365 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.37□□□□□ -1.87
SF3B3-214ENST00000572365 TRAV13-2A0A0B4J235 113 aa3.37□□□□□ -1.87
SF3B3-214ENST00000572365 PLAC8L1A1L4L8 177 aa3.37□□□□□ -1.87
SF3B3-214ENST00000572365 JMJD7-PLA2G4BH0Y9G9 81 aa3.37□□□□□ -1.87
SF3B3-214ENST00000572365 I3L2K1 104 aa3.37□□□□□ -1.87
SF3B3-214ENST00000572365 ERC2-IT1O76042 136 aa3.37□□□□□ -1.87
SF3B3-214ENST00000572365 BAALC-AS2P0C853 105 aa3.37□□□□□ -1.87
SF3B3-214ENST00000572365 CHTF8P0CG12 524 aa3.37□□□□□ -1.87
SF3B3-214ENST00000572365 Q6ZRU5 148 aa3.37□□□□□ -1.87
SF3B3-214ENST00000572365 EXOC3-AS1Q8N2X6 119 aa3.37□□□□□ -1.87
SF3B3-214ENST00000572365 DAZ3Q9NR90 486 aaKnown RBP3.37□□□□□ -1.87
SF3B3-214ENST00000572365 MRPL36Q9P0J6 103 aaKnown RBP3.37□□□□□ -1.87
SF3B3-214ENST00000572365 TRAV26-2A0A0B4J265 109 aa3.36□□□□□ -1.87
SF3B3-214ENST00000572365 LRCOL1A6NCL2 159 aa3.36□□□□□ -1.87
SF3B3-214ENST00000572365 H7C2G1 150 aa3.36□□□□□ -1.87
SF3B3-214ENST00000572365 I3L3M4 83 aa3.36□□□□□ -1.87
SF3B3-214ENST00000572365 PSCAO43653 123 aa3.36□□□□□ -1.87
SF3B3-214ENST00000572365 KRTAP5-9P26371 169 aa3.36□□□□□ -1.87
SF3B3-214ENST00000572365 SPINK13Q1W4C9 94 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms