RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 CLPSL1A2RUU4 121 aa1.48□□□□□ -2.17
HERPUD1-211ENST00000566550 SFT2D2O95562 160 aa1.48□□□□□ -2.17
HERPUD1-211ENST00000566550 ASIPP42127 132 aa1.48□□□□□ -2.17
HERPUD1-211ENST00000566550 KRTAP10-10P60014 251 aa1.48□□□□□ -2.17
HERPUD1-211ENST00000566550 PP632Q6XCG6 107 aa1.48□□□□□ -2.17
HERPUD1-211ENST00000566550 Q6ZQY7 126 aa1.48□□□□□ -2.17
HERPUD1-211ENST00000566550 UQCR10Q9UDW1 63 aa1.48□□□□□ -2.17
HERPUD1-211ENST00000566550 STAB2Q8WWQ8 2551 aa1.47□□□□□ -2.17
HERPUD1-211ENST00000566550 UQCRHLA0A096LP55 91 aa1.47□□□□□ -2.17
HERPUD1-211ENST00000566550 A0A0G2JND7 137 aa1.47□□□□□ -2.17
HERPUD1-211ENST00000566550 NCR3O14931 201 aa1.47□□□□□ -2.17
HERPUD1-211ENST00000566550 UQCRHP07919 91 aa1.47□□□□□ -2.17
HERPUD1-211ENST00000566550 TRAPPC2P0DI81 140 aa1.47□□□□□ -2.17
HERPUD1-211ENST00000566550 TRAPPC2BP0DI82 140 aa1.47□□□□□ -2.17
HERPUD1-211ENST00000566550 CAV3P56539 151 aa1.47□□□□□ -2.17
HERPUD1-211ENST00000566550 PEA15Q15121 130 aa1.47□□□□□ -2.17
HERPUD1-211ENST00000566550 CCL19Q99731 98 aa1.47□□□□□ -2.17
HERPUD1-211ENST00000566550 DYNLRB1Q9NP97 96 aa1.47□□□□□ -2.17
HERPUD1-211ENST00000566550 FSIP2Q5CZC0 6907 aa1.47□□□□□ -2.17
HERPUD1-211ENST00000566550 AKAP6Q13023 2319 aa1.46□□□□□ -2.18
HERPUD1-211ENST00000566550 KNL1Q8NG31 2342 aa1.46□□□□□ -2.18
HERPUD1-211ENST00000566550 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.46□□□□□ -2.18
HERPUD1-211ENST00000566550 TRAV22A0A0B4J277 110 aa1.46□□□□□ -2.18
HERPUD1-211ENST00000566550 CYB5AP00167 134 aa1.46□□□□□ -2.18
HERPUD1-211ENST00000566550 GYPAP02724 150 aa1.46□□□□□ -2.18
HERPUD1-211ENST00000566550 Q8N6K4 173 aa1.46□□□□□ -2.18
HERPUD1-211ENST00000566550 SERP2Q8N6R1 65 aa1.46□□□□□ -2.18
HERPUD1-211ENST00000566550 PRO1854Q9UHT4 67 aa1.46□□□□□ -2.18
HERPUD1-211ENST00000566550 V9GYH0 126 aa1.46□□□□□ -2.18
HERPUD1-211ENST00000566550 DMBT1Q9UGM3 2413 aaPredicted RBP1.46□□□□□ -2.18
HERPUD1-211ENST00000566550 DOCK11Q5JSL3 2073 aa1.45□□□□□ -2.18
HERPUD1-211ENST00000566550 K7EP34 96 aa1.45□□□□□ -2.18
HERPUD1-211ENST00000566550 TMEM170BQ5T4T1 132 aa1.45□□□□□ -2.18
HERPUD1-211ENST00000566550 C20orf78Q9BR46 151 aa1.45□□□□□ -2.18
HERPUD1-211ENST00000566550 CYSTM1Q9H1C7 97 aa1.45□□□□□ -2.18
HERPUD1-211ENST00000566550 NXT2Q9NPJ8 142 aaKnown RBP1.45□□□□□ -2.18
HERPUD1-211ENST00000566550 NDUFA4L2Q9NRX3 87 aa1.45□□□□□ -2.18
HERPUD1-211ENST00000566550 CRCT1Q9UGL9 99 aa1.45□□□□□ -2.18
HERPUD1-211ENST00000566550 R4GMQ9 66 aa1.45□□□□□ -2.18
HERPUD1-211ENST00000566550 RNF213Q63HN8 5207 aa1.44□□□□□ -2.18
HERPUD1-211ENST00000566550 TRBV30A0A0K0K1B3 111 aa1.44□□□□□ -2.18
HERPUD1-211ENST00000566550 HMGN4O00479 90 aa1.44□□□□□ -2.18
HERPUD1-211ENST00000566550 NDUFC1O43677 76 aa1.44□□□□□ -2.18
HERPUD1-211ENST00000566550 NMBP08949 121 aa1.44□□□□□ -2.18
HERPUD1-211ENST00000566550 SNRPFP62306 86 aaKnown RBP1.44□□□□□ -2.18
HERPUD1-211ENST00000566550 KLKP1Q107X0 134 aa1.44□□□□□ -2.18
HERPUD1-211ENST00000566550 Q5VV11 94 aa1.44□□□□□ -2.18
HERPUD1-211ENST00000566550 ZCCHC13Q8WW36 166 aaKnown RBP1.44□□□□□ -2.18
HERPUD1-211ENST00000566550 S100A16Q96FQ6 103 aaKnown RBP1.44□□□□□ -2.18
HERPUD1-211ENST00000566550 FAM167A-AS1Q96KT0 104 aa1.44□□□□□ -2.18
HERPUD1-211ENST00000566550 TRGV9Q99603 122 aa1.44□□□□□ -2.18
HERPUD1-211ENST00000566550 BPESC1Q9GZL8 116 aa1.44□□□□□ -2.18
HERPUD1-211ENST00000566550 CACFD1Q9UGQ2 172 aa1.44□□□□□ -2.18
HERPUD1-211ENST00000566550 LENEPQ9Y5L5 61 aa1.44□□□□□ -2.18
HERPUD1-211ENST00000566550 TCHHQ07283 1943 aa1.44□□□□□ -2.18
HERPUD1-211ENST00000566550 MED12Q93074 2177 aa1.44□□□□□ -2.18
HERPUD1-211ENST00000566550 CMYA5Q8N3K9 4069 aa1.44□□□□□ -2.18
HERPUD1-211ENST00000566550 TRBV7-7A0A0K0K1E9 115 aa1.43□□□□□ -2.18
HERPUD1-211ENST00000566550 CTXND1A0A1B0GTU2 59 aa1.43□□□□□ -2.18
HERPUD1-211ENST00000566550 COX6CP09669 75 aa1.43□□□□□ -2.18
HERPUD1-211ENST00000566550 LCN9Q8WX39 176 aa1.43□□□□□ -2.18
HERPUD1-211ENST00000566550 TMEM14BQ9NUH8 114 aa1.43□□□□□ -2.18
HERPUD1-211ENST00000566550 ARL2-SNX15V9GYD0 113 aa1.43□□□□□ -2.18
HERPUD1-211ENST00000566550 HECTD4Q9Y4D8 3996 aa1.43□□□□□ -2.18
HERPUD1-211ENST00000566550 NCOA6Q14686 2063 aaPredicted RBP1.43□□□□□ -2.18
HERPUD1-211ENST00000566550 ABCA1O95477 2261 aa1.42□□□□□ -2.18
HERPUD1-211ENST00000566550 A0A087WTM6 91 aa1.42□□□□□ -2.18
HERPUD1-211ENST00000566550 TRGV1A0A0A0MS02 117 aa1.42□□□□□ -2.18
HERPUD1-211ENST00000566550 LOC285095A0A1B0GVY8 99 aa1.42□□□□□ -2.18
HERPUD1-211ENST00000566550 IGLC7A0M8Q6 106 aa1.42□□□□□ -2.18
HERPUD1-211ENST00000566550 H3BQF6 201 aa1.42□□□□□ -2.18
HERPUD1-211ENST00000566550 SYS1-DBNDD2H3BUS1 97 aa1.42□□□□□ -2.18
HERPUD1-211ENST00000566550 M0R135 149 aa1.42□□□□□ -2.18
HERPUD1-211ENST00000566550 CD52P31358 61 aa1.42□□□□□ -2.18
HERPUD1-211ENST00000566550 EFNA4P52798 201 aa1.42□□□□□ -2.18
HERPUD1-211ENST00000566550 UBE2D3P61077 147 aa1.42□□□□□ -2.18
HERPUD1-211ENST00000566550 UBE2D2P62837 147 aa1.42□□□□□ -2.18
HERPUD1-211ENST00000566550 ZNF720Q7Z2F6 126 aa1.42□□□□□ -2.18
HERPUD1-211ENST00000566550 DEFB119Q8N690 84 aa1.42□□□□□ -2.18
HERPUD1-211ENST00000566550 ANK3Q12955 4377 aaKnown RBP1.42□□□□□ -2.18
HERPUD1-211ENST00000566550 TMEM14DPA8MWL7 114 aa1.41□□□□□ -2.18
HERPUD1-211ENST00000566550 F8VRH5 84 aa1.41□□□□□ -2.18
HERPUD1-211ENST00000566550 ACYP2P14621 99 aa1.41□□□□□ -2.18
HERPUD1-211ENST00000566550 DEFB109BQ30KR1 87 aa1.41□□□□□ -2.18
HERPUD1-211ENST00000566550 TDRG1Q3Y452 100 aa1.41□□□□□ -2.18
HERPUD1-211ENST00000566550 S100A13Q99584 98 aa1.41□□□□□ -2.18
HERPUD1-211ENST00000566550 LYSTQ99698 3801 aa1.41□□□□□ -2.18
HERPUD1-211ENST00000566550 CDC42SE2Q9NRR3 84 aa1.41□□□□□ -2.18
HERPUD1-211ENST00000566550 MUC19Q7Z5P9 8384 aa1.41□□□□□ -2.18
HERPUD1-211ENST00000566550 FRAS1Q86XX4 4008 aa1.41□□□□□ -2.18
HERPUD1-211ENST00000566550 CACNA1CQ13936 2221 aa1.4□□□□□ -2.18
HERPUD1-211ENST00000566550 HMCN2Q8NDA2 5059 aa1.4□□□□□ -2.19
HERPUD1-211ENST00000566550 TRAV1-2A0A0B4J238 106 aa1.4□□□□□ -2.19
HERPUD1-211ENST00000566550 M0R3E3 92 aa1.4□□□□□ -2.19
HERPUD1-211ENST00000566550 CCL18P55774 89 aa1.4□□□□□ -2.19
HERPUD1-211ENST00000566550 PMCHL1Q16048 86 aa1.4□□□□□ -2.19
HERPUD1-211ENST00000566550 KRTAP6-3Q3LI67 103 aa1.4□□□□□ -2.19
HERPUD1-211ENST00000566550 BAGE3Q86Y29 109 aa1.4□□□□□ -2.19
HERPUD1-211ENST00000566550 Q96NJ1 140 aa1.4□□□□□ -2.19
HERPUD1-211ENST00000566550 WFDC6Q9BQY6 131 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms