RNA–Protein interactions for RNA: ENST00000563688.5

SCAPER-208, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 2

Gene SCAPER, Length 549 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-208ENST00000563688 TSC2P49815 1807 aa-0.08□□□□□ -2.42
SCAPER-208ENST00000563688 CEP250Q9BV73 2442 aa-0.08□□□□□ -2.42
SCAPER-208ENST00000563688 NBASA2RRP1 2371 aa-0.09□□□□□ -2.42
SCAPER-208ENST00000563688 DEPDC5O75140 1603 aa-0.09□□□□□ -2.42
SCAPER-208ENST00000563688 ADAMTS12P58397 1594 aa-0.09□□□□□ -2.42
SCAPER-208ENST00000563688 ANKRD50Q9ULJ7 1429 aa-0.09□□□□□ -2.42
SCAPER-208ENST00000563688 SPTY2D1-AS1A0A0U1RR47 76 aa-0.09□□□□□ -2.42
SCAPER-208ENST00000563688 A8MTW9 85 aa-0.09□□□□□ -2.42
SCAPER-208ENST00000563688 TMEM262E9PQX1 116 aa-0.09□□□□□ -2.42
SCAPER-208ENST00000563688 H3BUA1 57 aa-0.09□□□□□ -2.42
SCAPER-208ENST00000563688 CYB5AP00167 134 aa-0.09□□□□□ -2.42
SCAPER-208ENST00000563688 ACYP1P07311 99 aa-0.09□□□□□ -2.42
SCAPER-208ENST00000563688 TRAPPC2P0DI81 140 aa-0.09□□□□□ -2.42
SCAPER-208ENST00000563688 TRAPPC2BP0DI82 140 aa-0.09□□□□□ -2.42
SCAPER-208ENST00000563688 UBE2D3P61077 147 aa-0.09□□□□□ -2.42
SCAPER-208ENST00000563688 UBE2D2P62837 147 aa-0.09□□□□□ -2.42
SCAPER-208ENST00000563688 UBA52P62987 128 aaKnown RBP-0.09□□□□□ -2.42
SCAPER-208ENST00000563688 DEFA5Q01523 94 aa-0.09□□□□□ -2.42
SCAPER-208ENST00000563688 PMCHL1Q16048 86 aa-0.09□□□□□ -2.42
SCAPER-208ENST00000563688 KRTAP20-1Q3LI63 56 aa-0.09□□□□□ -2.42
SCAPER-208ENST00000563688 RPL13AP3Q6NVV1 102 aa-0.09□□□□□ -2.42
SCAPER-208ENST00000563688 TMEM203Q969S6 136 aa-0.09□□□□□ -2.42
SCAPER-208ENST00000563688 NOP10Q9NPE3 64 aaKnown RBP-0.09□□□□□ -2.42
SCAPER-208ENST00000563688 PRO1854Q9UHT4 67 aa-0.09□□□□□ -2.42
SCAPER-208ENST00000563688 RABAC1Q9UI14 185 aa-0.09□□□□□ -2.42
SCAPER-208ENST00000563688 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.09□□□□□ -2.42
SCAPER-208ENST00000563688 COL4A6Q14031 1691 aa-0.09□□□□□ -2.42
SCAPER-208ENST00000563688 ROCK2O75116 1388 aaKnown RBP-0.09□□□□□ -2.42
SCAPER-208ENST00000563688 ANKRD36BQ8N2N9 1353 aa-0.09□□□□□ -2.42
SCAPER-208ENST00000563688 KIAA0556O60303 1618 aa-0.09□□□□□ -2.42
SCAPER-208ENST00000563688 LRP6O75581 1613 aa-0.09□□□□□ -2.42
SCAPER-208ENST00000563688 CICQ96RK0 1608 aaPredicted RBP-0.09□□□□□ -2.42
SCAPER-208ENST00000563688 NRXN1Q9ULB1 1477 aa-0.1□□□□□ -2.42
SCAPER-208ENST00000563688 PDCD11Q14690 1871 aaKnown RBP-0.1□□□□□ -2.42
SCAPER-208ENST00000563688 KNDC1Q76NI1 1749 aa-0.1□□□□□ -2.42
SCAPER-208ENST00000563688 TIAM2Q8IVF5 1701 aa-0.1□□□□□ -2.42
SCAPER-208ENST00000563688 XRN1Q8IZH2 1706 aaKnown RBP-0.1□□□□□ -2.42
SCAPER-208ENST00000563688 SCAPERQ9BY12 1400 aa-0.1□□□□□ -2.43
SCAPER-208ENST00000563688 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.1□□□□□ -2.43
SCAPER-208ENST00000563688 KIF21AQ7Z4S6 1674 aa-0.1□□□□□ -2.43
SCAPER-208ENST00000563688 RIMS1Q86UR5 1692 aaKnown RBP-0.1□□□□□ -2.43
SCAPER-208ENST00000563688 TRBV25-1A0A075B6N4 114 aa-0.1□□□□□ -2.43
SCAPER-208ENST00000563688 MMP24-AS1A0A0U1RRL7 71 aa-0.1□□□□□ -2.43
SCAPER-208ENST00000563688 LOC100130705A0A1B0GUX0 176 aa-0.1□□□□□ -2.43
SCAPER-208ENST00000563688 IGLC7A0M8Q6 106 aa-0.1□□□□□ -2.43
SCAPER-208ENST00000563688 MIF4GDA9UHW6 222 aaKnown RBP-0.1□□□□□ -2.43
SCAPER-208ENST00000563688 LYNX1G3V0Z9 82 aa-0.1□□□□□ -2.43
SCAPER-208ENST00000563688 HMGN4O00479 90 aa-0.1□□□□□ -2.43
SCAPER-208ENST00000563688 GYPAP02724 150 aa-0.1□□□□□ -2.43
SCAPER-208ENST00000563688 PRM1P04553 51 aa-0.1□□□□□ -2.43
SCAPER-208ENST00000563688 SNCAP37840 140 aa-0.1□□□□□ -2.43
SCAPER-208ENST00000563688 SEC11AP67812 179 aa-0.1□□□□□ -2.43
SCAPER-208ENST00000563688 PRLHP81277 87 aa-0.1□□□□□ -2.43
SCAPER-208ENST00000563688 KRTAP19-6Q3LI70 58 aa-0.1□□□□□ -2.43
SCAPER-208ENST00000563688 CLPSL2Q6UWE3 100 aa-0.1□□□□□ -2.43
SCAPER-208ENST00000563688 ZNF720Q7Z2F6 126 aa-0.1□□□□□ -2.43
SCAPER-208ENST00000563688 C6orf201Q7Z4U5 140 aa-0.1□□□□□ -2.43
SCAPER-208ENST00000563688 SVBPQ8N300 66 aa-0.1□□□□□ -2.43
SCAPER-208ENST00000563688 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.1□□□□□ -2.43
SCAPER-208ENST00000563688 TRGV9Q99603 122 aa-0.1□□□□□ -2.43
SCAPER-208ENST00000563688 MRPL34Q9BQ48 92 aaKnown RBP-0.1□□□□□ -2.43
SCAPER-208ENST00000563688 DPY30Q9C005 99 aa-0.1□□□□□ -2.43
SCAPER-208ENST00000563688 MAGI3Q5TCQ9 1506 aa-0.1□□□□□ -2.43
SCAPER-208ENST00000563688 EHBP1L1Q8N3D4 1523 aa-0.1□□□□□ -2.43
SCAPER-208ENST00000563688 COL14A1Q05707 1796 aaKnown RBP-0.1□□□□□ -2.43
SCAPER-208ENST00000563688 PAPPA2Q9BXP8 1791 aa-0.1□□□□□ -2.43
SCAPER-208ENST00000563688 UBR3Q6ZT12 1888 aa-0.1□□□□□ -2.43
SCAPER-208ENST00000563688 NKTRP30414 1462 aaKnown RBP-0.1□□□□□ -2.43
SCAPER-208ENST00000563688 ERVK-7P63135 1459 aa-0.1□□□□□ -2.43
SCAPER-208ENST00000563688 RAPGEF2Q9Y4G8 1499 aa-0.1□□□□□ -2.43
SCAPER-208ENST00000563688 ACACAQ13085 2346 aa-0.1□□□□□ -2.43
SCAPER-208ENST00000563688 KNL1Q8NG31 2342 aa-0.1□□□□□ -2.43
SCAPER-208ENST00000563688 KIF20BQ96Q89 1820 aa-0.1□□□□□ -2.43
SCAPER-208ENST00000563688 ARHGEF5Q12774 1597 aa-0.11□□□□□ -2.43
SCAPER-208ENST00000563688 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.11□□□□□ -2.43
SCAPER-208ENST00000563688 SHPRHQ149N8 1683 aa-0.11□□□□□ -2.43
SCAPER-208ENST00000563688 CPSF1Q10570 1443 aaKnown RBP-0.11□□□□□ -2.43
SCAPER-208ENST00000563688 NCOA3Q9Y6Q9 1424 aa-0.11□□□□□ -2.43
SCAPER-208ENST00000563688 BCORQ6W2J9 1755 aa-0.11□□□□□ -2.43
SCAPER-208ENST00000563688 HMGXB3Q12766 1538 aa-0.11□□□□□ -2.43
SCAPER-208ENST00000563688 ARHGEF12Q9NZN5 1544 aa-0.11□□□□□ -2.43
SCAPER-208ENST00000563688 A0A087WVE0 104 aa-0.11□□□□□ -2.43
SCAPER-208ENST00000563688 LCE6AA0A183 80 aa-0.11□□□□□ -2.43
SCAPER-208ENST00000563688 hADV29S1A0JD25 119 aa-0.11□□□□□ -2.43
SCAPER-208ENST00000563688 H0Y9P7 68 aa-0.11□□□□□ -2.43
SCAPER-208ENST00000563688 M0QZ58 72 aa-0.11□□□□□ -2.43
SCAPER-208ENST00000563688 ATOX1O00244 68 aa-0.11□□□□□ -2.43
SCAPER-208ENST00000563688 MT1EP04732 61 aa-0.11□□□□□ -2.43
SCAPER-208ENST00000563688 UQCRHP07919 91 aa-0.11□□□□□ -2.43
SCAPER-208ENST00000563688 TNP1P09430 55 aa-0.11□□□□□ -2.43
SCAPER-208ENST00000563688 IGLC1P0CG04 106 aa-0.11□□□□□ -2.43
SCAPER-208ENST00000563688 ASIPP42127 132 aa-0.11□□□□□ -2.43
SCAPER-208ENST00000563688 GNG4P50150 75 aa-0.11□□□□□ -2.43
SCAPER-208ENST00000563688 GNGT1P63211 74 aa-0.11□□□□□ -2.43
SCAPER-208ENST00000563688 PEA15Q15121 130 aa-0.11□□□□□ -2.43
SCAPER-208ENST00000563688 PLGLAQ15195 96 aa-0.11□□□□□ -2.43
SCAPER-208ENST00000563688 KRTAP6-2Q3LI66 62 aa-0.11□□□□□ -2.43
SCAPER-208ENST00000563688 H1FX-AS1Q4G0G2 97 aa-0.11□□□□□ -2.43
SCAPER-208ENST00000563688 ACBD7Q8N6N7 88 aa-0.11□□□□□ -2.43
SCAPER-208ENST00000563688 LINC01600Q96MT4 127 aa-0.11□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms