RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 TRAPPC1Q9Y5R8 145 aa9.84□□□□□ -0.83
TPM1-226ENST00000560959 HINT1P49773 126 aaPredicted RBP9.83□□□□□ -0.84
TPM1-226ENST00000560959 Q5XG85 94 aa9.83□□□□□ -0.84
TPM1-226ENST00000560959 MIEN1Q9BRT3 115 aa9.83□□□□□ -0.84
TPM1-226ENST00000560959 LAMTOR3Q9UHA4 124 aa9.82□□□□□ -0.84
TPM1-226ENST00000560959 CBY1Q9Y3M2 126 aa9.82□□□□□ -0.84
TPM1-226ENST00000560959 CLLU1Q5K131 121 aa9.81□□□□□ -0.84
TPM1-226ENST00000560959 COMMD7Q86VX2 200 aa9.79□□□□□ -0.84
TPM1-226ENST00000560959 USH2AO75445 5202 aa9.78□□□□□ -0.84
TPM1-226ENST00000560959 LEPROTO15243 131 aa9.78□□□□□ -0.84
TPM1-226ENST00000560959 KRTAP3-3Q9BYR6 98 aa9.78□□□□□ -0.84
TPM1-226ENST00000560959 KRTAP3-2Q9BYR7 98 aa9.78□□□□□ -0.84
TPM1-226ENST00000560959 DHRS4-AS1Q9P1J3 65 aa9.78□□□□□ -0.84
TPM1-226ENST00000560959 SSPOA2VEC9 5147 aa9.77□□□□□ -0.84
TPM1-226ENST00000560959 TSPEAR-AS2P59090 65 aa9.77□□□□□ -0.85
TPM1-226ENST00000560959 CHCHD1Q96BP2 118 aaKnown RBP9.77□□□□□ -0.85
TPM1-226ENST00000560959 NMUP48645 174 aa9.76□□□□□ -0.85
TPM1-226ENST00000560959 C1orf195Q5TG92 126 aa9.76□□□□□ -0.85
TPM1-226ENST00000560959 PRO1933Q9H354 126 aa9.76□□□□□ -0.85
TPM1-226ENST00000560959 RPS10P5Q9NQ39 176 aa9.76□□□□□ -0.85
TPM1-226ENST00000560959 CFC1P0CG37 223 aa9.75□□□□□ -0.85
TPM1-226ENST00000560959 RHEBQ15382 184 aa9.75□□□□□ -0.85
TPM1-226ENST00000560959 H7C2G1 150 aa9.74□□□□□ -0.85
TPM1-226ENST00000560959 J3QQQ9 107 aa9.73□□□□□ -0.85
TPM1-226ENST00000560959 SOSTDC1Q6X4U4 206 aa9.71□□□□□ -0.86
TPM1-226ENST00000560959 AKR1D1P51857 326 aa9.7□□□□□ -0.86
TPM1-226ENST00000560959 C10orf91Q5T1B1 145 aa9.7□□□□□ -0.86
TPM1-226ENST00000560959 EIF4EBP3O60516 100 aaPredicted RBP9.68□□□□□ -0.86
TPM1-226ENST00000560959 TAL2Q16559 108 aa9.68□□□□□ -0.86
TPM1-226ENST00000560959 SMIM29Q86T20 159 aa9.68□□□□□ -0.86
TPM1-226ENST00000560959 FCGBPQ9Y6R7 5405 aaPredicted RBP9.68□□□□□ -0.86
TPM1-226ENST00000560959 TEX49A0A1B0GTD5 131 aa9.67□□□□□ -0.86
TPM1-226ENST00000560959 LGALS3P17931 250 aaKnown RBP9.67□□□□□ -0.86
TPM1-226ENST00000560959 PLNP26678 52 aa9.67□□□□□ -0.86
TPM1-226ENST00000560959 KRTAP9-8Q9BYQ0 159 aa9.67□□□□□ -0.86
TPM1-226ENST00000560959 HERVK_113P61574 105 aa9.66□□□□□ -0.86
TPM1-226ENST00000560959 Q1RN00 199 aa9.66□□□□□ -0.86
TPM1-226ENST00000560959 ADAMTSL4-AS1Q5T5F5 129 aa9.66□□□□□ -0.86
TPM1-226ENST00000560959 ELOF1P60002 83 aaKnown RBP9.65□□□□□ -0.86
TPM1-226ENST00000560959 NPC2P61916 151 aa9.64□□□□□ -0.87
TPM1-226ENST00000560959 SPANXCQ9NY87 97 aa9.64□□□□□ -0.87
TPM1-226ENST00000560959 A0A0J9YXY3 114 aa9.63□□□□□ -0.87
TPM1-226ENST00000560959 H0Y8G0 127 aa9.63□□□□□ -0.87
TPM1-226ENST00000560959 HSBP1O75506 76 aa9.63□□□□□ -0.87
TPM1-226ENST00000560959 Q6Q795 121 aa9.63□□□□□ -0.87
TPM1-226ENST00000560959 OR13C6PQ8NH95 151 aa9.63□□□□□ -0.87
TPM1-226ENST00000560959 COX7BP24311 80 aa9.62□□□□□ -0.87
TPM1-226ENST00000560959 DEFB105AQ8NG35 78 aa9.62□□□□□ -0.87
TPM1-226ENST00000560959 SPANXDQ9BXN6 97 aa9.61□□□□□ -0.87
TPM1-226ENST00000560959 DPM2O94777 84 aa9.6□□□□□ -0.87
TPM1-226ENST00000560959 TCL1BO95988 128 aa9.6□□□□□ -0.87
TPM1-226ENST00000560959 LEPROTL1O95214 131 aa9.59□□□□□ -0.87
TPM1-226ENST00000560959 IGKCP01834 107 aa9.58□□□□□ -0.88
TPM1-226ENST00000560959 ATP11AUNQ6ZP68 121 aa9.58□□□□□ -0.88
TPM1-226ENST00000560959 LINC00308Q8TCZ7 52 aa9.58□□□□□ -0.88
TPM1-226ENST00000560959 IGLV5-48A0A075B6I7 105 aa9.57□□□□□ -0.88
TPM1-226ENST00000560959 TRBV7-6A0A0J9YX20 115 aa9.57□□□□□ -0.88
TPM1-226ENST00000560959 C6orf99Q4VX62 202 aa9.57□□□□□ -0.88
TPM1-226ENST00000560959 Q75L30 129 aa9.56□□□□□ -0.88
TPM1-226ENST00000560959 LINC00518Q8N0U6 118 aa9.56□□□□□ -0.88
TPM1-226ENST00000560959 A0A0G2JQZ4 141 aa9.54□□□□□ -0.88
TPM1-226ENST00000560959 C20orf202A1L168 122 aa9.54□□□□□ -0.88
TPM1-226ENST00000560959 E9PLD3 99 aa9.54□□□□□ -0.88
TPM1-226ENST00000560959 LITAFQ99732 161 aa9.54□□□□□ -0.88
TPM1-226ENST00000560959 TIMM17BO60830 172 aa9.53□□□□□ -0.88
TPM1-226ENST00000560959 HSPB8Q9UJY1 196 aa9.53□□□□□ -0.88
TPM1-226ENST00000560959 KRTAP19-1Q8IUB9 90 aa9.51□□□□□ -0.89
TPM1-226ENST00000560959 YPEL4Q96NS1 127 aa9.51□□□□□ -0.89
TPM1-226ENST00000560959 PMCHL2Q9BQD1 86 aa9.51□□□□□ -0.89
TPM1-226ENST00000560959 A0A1B0GWB2 263 aa9.5□□□□□ -0.89
TPM1-226ENST00000560959 SNAPINO95295 136 aa9.48□□□□□ -0.89
TPM1-226ENST00000560959 PCP2Q8IVA1 136 aa9.47□□□□□ -0.89
TPM1-226ENST00000560959 SYNE2Q8WXH0 6885 aaKnown RBP9.47□□□□□ -0.89
TPM1-226ENST00000560959 APOC3P02656 99 aa9.46□□□□□ -0.9
TPM1-226ENST00000560959 LINC00310P59036 64 aa9.46□□□□□ -0.9
TPM1-226ENST00000560959 SVBPQ8N300 66 aa9.46□□□□□ -0.9
TPM1-226ENST00000560959 OBSCN-AS1Q96MR7 158 aa9.46□□□□□ -0.9
TPM1-226ENST00000560959 MACF1Q9UPN3 7388 aaKnown RBP9.45□□□□□ -0.9
TPM1-226ENST00000560959 A4D1N5 150 aa9.45□□□□□ -0.9
TPM1-226ENST00000560959 SERF1AO75920 110 aa9.45□□□□□ -0.9
TPM1-226ENST00000560959 FABP4P15090 132 aa9.45□□□□□ -0.9
TPM1-226ENST00000560959 LCE2BO14633 110 aa9.43□□□□□ -0.9
TPM1-226ENST00000560959 MT2AP02795 61 aa9.43□□□□□ -0.9
TPM1-226ENST00000560959 TRBV20-1A0A075B6N2 111 aa9.42□□□□□ -0.9
TPM1-226ENST00000560959 NDUFA5Q16718 116 aa9.42□□□□□ -0.9
TPM1-226ENST00000560959 NHP2Q9NX24 153 aaKnown RBP9.42□□□□□ -0.9
TPM1-226ENST00000560959 TRBV7-7A0A0K0K1E9 115 aa9.39□□□□□ -0.91
TPM1-226ENST00000560959 Q6JHZ5 121 aa9.39□□□□□ -0.91
TPM1-226ENST00000560959 F8WEM9 126 aa9.38□□□□□ -0.91
TPM1-226ENST00000560959 TRGC2P03986 189 aa9.38□□□□□ -0.91
TPM1-226ENST00000560959 KRTAP9-3Q9BYQ3 159 aa9.38□□□□□ -0.91
TPM1-226ENST00000560959 ZNF815PA8K554 130 aa9.37□□□□□ -0.91
TPM1-226ENST00000560959 COPS9Q8WXC6 57 aa9.36□□□□□ -0.91
TPM1-226ENST00000560959 C20orf166-AS1Q96NR2 134 aa9.36□□□□□ -0.91
TPM1-226ENST00000560959 MT1FP04733 61 aa9.35□□□□□ -0.91
TPM1-226ENST00000560959 CLEC2BQ92478 149 aa9.35□□□□□ -0.91
TPM1-226ENST00000560959 Q96NJ1 140 aa9.35□□□□□ -0.91
TPM1-226ENST00000560959 LINC00846Q9NV44 126 aa9.35□□□□□ -0.91
TPM1-226ENST00000560959 A6NDN8 102 aa9.34□□□□□ -0.91
TPM1-226ENST00000560959 A8MUU9 505 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms